BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os05g0597100 Os05g0597100|AK072845
         (297 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G22650.1  | chr5:7534120-7536054 FORWARD LENGTH=307            110   9e-25
AT3G44750.1  | chr3:16298045-16299585 FORWARD LENGTH=246          107   7e-24
AT5G03740.1  | chr5:981994-983961 FORWARD LENGTH=295              105   3e-23
AT2G27840.1  | chr2:11862085-11863707 FORWARD LENGTH=204           74   8e-14

>AT5G22650.1 | chr5:7534120-7536054 FORWARD LENGTH=307
          Length = 306

 Score =  110 bits (275), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 51/92 (55%), Positives = 63/92 (68%)

Query: 1  MEFWGLEVKPGQTVKCEPEDERFLHLSQAALGESKKGSDNAVMYVKTDDQKLVIGTLSAD 60
          MEFWG+ V P    K  PE++  +H+SQA+L  + K  ++ V+ V     KLVIGTLS D
Sbjct: 1  MEFWGVAVTPKNATKVTPEEDSLVHISQASLDCTVKSGESVVLSVTVGGAKLVIGTLSQD 60

Query: 61 KFPQIQFDLVFDKEFELSHTSKTASVFFSGYK 92
          KFPQI FDLVFDKEFELSH+   A+V F GYK
Sbjct: 61 KFPQISFDLVFDKEFELSHSGTKANVHFIGYK 92



>AT3G44750.1 | chr3:16298045-16299585 FORWARD LENGTH=246
          Length = 245

 Score =  107 bits (267), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 51/93 (54%), Positives = 64/93 (68%), Gaps = 1/93 (1%)

Query: 1  MEFWGLEVKPGQTVKCEPEDERFLHLSQAALGESKKGSDNAV-MYVKTDDQKLVIGTLSA 59
          MEFWG+EVK G+ V   PE+   +H+SQA+LGE K      V ++VK  +Q LV+GTLS 
Sbjct: 1  MEFWGIEVKSGKPVTVTPEEGILIHVSQASLGECKNKKGEFVPLHVKVGNQNLVLGTLST 60

Query: 60 DKFPQIQFDLVFDKEFELSHTSKTASVFFSGYK 92
          +  PQ+  DLVFDKEFELSHT    SV+F GYK
Sbjct: 61 ENIPQLFCDLVFDKEFELSHTWGKGSVYFVGYK 93



>AT5G03740.1 | chr5:981994-983961 FORWARD LENGTH=295
          Length = 294

 Score =  105 bits (261), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 49/94 (52%), Positives = 65/94 (69%), Gaps = 1/94 (1%)

Query: 1  MEFWGLEVKPGQTVKCEPEDERFLHLSQAALGESKKGSDNAV-MYVKTDDQKLVIGTLSA 59
          MEFWG+EVK G+ +  +P  +R +H+SQ ALGESK      + +YV     KL+IGTLS 
Sbjct: 1  MEFWGVEVKNGKPLHLDPGLDRLVHISQVALGESKNNVTEPIQLYVTVGSDKLLIGTLSH 60

Query: 60 DKFPQIQFDLVFDKEFELSHTSKTASVFFSGYKV 93
          +KFPQ+  ++V ++ F LSHT K  SVFFSGYKV
Sbjct: 61 EKFPQLSTEIVLERNFALSHTWKNGSVFFSGYKV 94




 Score = 57.4 bits (137), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 40/87 (45%), Positives = 45/87 (51%), Gaps = 7/87 (8%)

Query: 215 KTPSSDKKAKIATPSGQKTGDKK-GVHVATPHPAKQASKTP----VNDXXXXXXXXXXXX 269
           K P+S+KKAK  TP  QKT  KK  VHVATPHP+KQA K        +            
Sbjct: 208 KNPASNKKAKFVTP--QKTDSKKPHVHVATPHPSKQAGKNSGGGSTGETSKQQQTPKSAG 265

Query: 270 XXXXXXXXXTFNSEMALQSHSKAKHPA 296
                    TF SEM LQSH+KAKH A
Sbjct: 266 AFGCKSCTRTFTSEMGLQSHTKAKHSA 292



>AT2G27840.1 | chr2:11862085-11863707 FORWARD LENGTH=204
          Length = 203

 Score = 74.3 bits (181), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 43/96 (44%), Positives = 56/96 (58%), Gaps = 6/96 (6%)

Query: 1  MEFWGLEVKPGQTVKCEPEDERFLHLSQAALG--ESKKGSDNAVMYVKT--DDQKLVIGT 56
          MEFWG+E+KPG+  K   +D   +H SQ  LG  E  K  +   +YVK   D+   +IG 
Sbjct: 1  MEFWGIEIKPGKPFKVIQKDGFMVHASQVTLGDVEKVKKDETFAVYVKIGDDENGFMIGN 60

Query: 57 LSADKFPQIQFDLVFDKEFELSHTSKTASVFFSGYK 92
          LS  KFPQ   DL    EFE+SH S T+SV+  GY+
Sbjct: 61 LSQ-KFPQFSIDLYLGHEFEISHNS-TSSVYLIGYR 94



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.310    0.126    0.357 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,951,712
Number of extensions: 123250
Number of successful extensions: 256
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 249
Number of HSP's successfully gapped: 7
Length of query: 297
Length of database: 11,106,569
Length adjustment: 98
Effective length of query: 199
Effective length of database: 8,419,801
Effective search space: 1675540399
Effective search space used: 1675540399
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 111 (47.4 bits)