BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0592100 Os05g0592100|AK071333
(386 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G49970.1 | chr1:18501936-18504462 REVERSE LENGTH=388 349 1e-96
AT1G09130.3 | chr1:2939731-2942217 REVERSE LENGTH=371 151 5e-37
AT4G17040.1 | chr4:9586740-9589297 REVERSE LENGTH=306 150 1e-36
AT5G45390.1 | chr5:18396351-18397586 FORWARD LENGTH=293 89 5e-18
AT1G12410.1 | chr1:4223099-4224954 FORWARD LENGTH=280 89 5e-18
AT1G66670.1 | chr1:24863995-24865646 REVERSE LENGTH=310 88 6e-18
AT5G23140.1 | chr5:7783811-7784826 FORWARD LENGTH=242 83 2e-16
AT1G11750.2 | chr1:3967609-3969535 FORWARD LENGTH=290 75 7e-14
AT1G02560.1 | chr1:538000-539805 FORWARD LENGTH=299 75 8e-14
ATCG00670.1 | chrC:69910-71882 REVERSE LENGTH=197 49 5e-06
>AT1G49970.1 | chr1:18501936-18504462 REVERSE LENGTH=388
Length = 387
Score = 349 bits (895), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 180/326 (55%), Positives = 227/326 (69%), Gaps = 3/326 (0%)
Query: 53 NYDHIPKQFREENLKDGLMDNYKNVPQFLYGLSPAQIEMFMNDDNPYDRQSQRVTEESIS 112
++DHIPKQFR +NLKDG+M N+KNVPQ+ YGL+ AQ++MFM +D+P RQ+++VTEESIS
Sbjct: 62 SFDHIPKQFRGDNLKDGVMQNFKNVPQYFYGLNSAQMDMFMTEDSPVRRQAEKVTEESIS 121
Query: 113 ASRSY-DEFGMYNLSGMHEGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXR 171
+ +Y + G++++SGM+ R
Sbjct: 122 SRNNYLNNGGIWSMSGMNAA-DARRYSMSVQMYRGGGGGGGSERPRTAPPDLPSLLLDAR 180
Query: 172 IIFLGMPIVPAVTELIAAQFLWLDYDDRTKPIYLYINSTGTMDENNELVASETDAFAIAD 231
I +LGMPIVPAVTEL+ AQF+WLDYD+ TKPIYLYINS GT +E E V SET+A+AIAD
Sbjct: 181 ICYLGMPIVPAVTELLVAQFMWLDYDNPTKPIYLYINSPGTQNEKMETVGSETEAYAIAD 240
Query: 232 FINRSKSKVYTINLSMAYGQAAMLLSLGVKGKRGVLPNSITKLYLPKVHKSGGAAIDMWI 291
I+ KS VYTIN MA+GQAAMLLSLG KG R V P+S TKLYLPKV++S GAAIDMWI
Sbjct: 241 TISYCKSDVYTINCGMAFGQAAMLLSLGKKGYRAVQPHSSTKLYLPKVNRSSGAAIDMWI 300
Query: 292 KAKELDTNTDYYLELLSKGVGKPKEELAEFLKGPRYFRAQEAIDYGLADTILHSLDGSFK 351
KAKELD NT+YY+ELL+KG GK KE++ E +K P+Y +AQ AIDYG+AD I S D SF+
Sbjct: 301 KAKELDANTEYYIELLAKGTGKSKEQINEDIKRPKYLQAQAAIDYGIADKIADSQDSSFE 360
Query: 352 PKDLTAQLAKAQEMRQSGKRPAAGAG 377
+D LA+ + MR G PAA AG
Sbjct: 361 KRDYDGTLAQ-RAMRPGGGSPAAPAG 385
>AT1G09130.3 | chr1:2939731-2942217 REVERSE LENGTH=371
Length = 370
Score = 151 bits (382), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 117/174 (67%), Gaps = 1/174 (0%)
Query: 171 RIIFLGMPIVPAVTELIAAQFLWLDYDDRTKPIYLYINSTGTMDENNELVASETDAFAIA 230
RI+++GMP+VPAVTEL+ A+ ++L + D +PIY+YINSTGT ++ E V E++ FAI
Sbjct: 130 RIVYIGMPLVPAVTELVVAELMYLQWLDPKEPIYIYINSTGTTRDDGETVGMESEGFAIY 189
Query: 231 DFINRSKSKVYTINLSMAYGQAAMLLSLGVKGKRGVLPNSITKLYLPKVHKSG-GAAIDM 289
D + + K++V+T+ + A GQA +LLS G KGKR ++P++ + P+V SG A D+
Sbjct: 190 DSLMQLKNEVHTVCVGAAIGQACLLLSAGTKGKRFMMPHAKAMIQQPRVPSSGLMPASDV 249
Query: 290 WIKAKELDTNTDYYLELLSKGVGKPKEELAEFLKGPRYFRAQEAIDYGLADTIL 343
I+AKE+ TN D +ELLSK G E +A ++ P Y A +A ++G+ D IL
Sbjct: 250 LIRAKEVITNRDILVELLSKHTGNSVETVANVMRRPYYMDAPKAKEFGVIDRIL 303
>AT4G17040.1 | chr4:9586740-9589297 REVERSE LENGTH=306
Length = 305
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 125/193 (64%), Gaps = 3/193 (1%)
Query: 171 RIIFLGMPIVPAVTELIAAQFLWLDYDDRTKPIYLYINSTGTMDENNELVASETDAFAIA 230
RI++LGM +VP+VTELI A+FL+L Y+D KPIYLYINSTGT +N E + +T+AFAI
Sbjct: 114 RIVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGT-TKNGEKLGYDTEAFAIY 172
Query: 231 DFINRSKSKVYTINLSMAYGQAAMLLSLGVKGKRGVLPNSITKLYLPKVHKSGGAAIDMW 290
D + K ++T+ + A+G+AA+LL+ G KG R LP+S + P + + G A D+
Sbjct: 173 DVMGYVKPPIFTLCVGNAWGEAALLLTAGAKGNRSALPSSTIMIKQP-IARFQGQATDVE 231
Query: 291 IKAKELDTNTDYYLELLSKGVGKPKEELAEFLKGPRYFRAQEAIDYGLADTILHSLDGSF 350
I KE+ ++L SK +GK E++ +K P+YF EA++YG+ D ++++ GS
Sbjct: 232 IARKEIKHIKTEMVKLYSKHIGKSPEQIEADMKRPKYFSPTEAVEYGIIDKVVYNERGS- 290
Query: 351 KPKDLTAQLAKAQ 363
+ + + + L KAQ
Sbjct: 291 QDRGVVSDLKKAQ 303
>AT5G45390.1 | chr5:18396351-18397586 FORWARD LENGTH=293
Length = 292
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 91/173 (52%), Gaps = 10/173 (5%)
Query: 171 RIIFLGMPIVPAVTELIAAQFLWLDYDDRTKPIYLYINSTGTMDENNELVASETDAFAIA 230
RI+FLG I V + I +Q L LD D K I L+INS G S + AI
Sbjct: 88 RIVFLGSSIDDFVADAIMSQLLLLDAKDPKKDIKLFINSPG---------GSLSATMAIY 138
Query: 231 DFINRSKSKVYTINLSMAYGQAAMLLSLGVKGKRGVLPNSITKLYLPKVHKSGGAAIDMW 290
D + ++ V TI L +A A+++L G KGKR +PN+ ++ P + + G AID+
Sbjct: 139 DVVQLVRADVSTIALGIAASTASIILGAGTKGKRFAMPNTRIMIHQP-LGGASGQAIDVE 197
Query: 291 IKAKELDTNTDYYLELLSKGVGKPKEELAEFLKGPRYFRAQEAIDYGLADTIL 343
I+AKE+ N + +++ + E++ + + RY EA++YGL D ++
Sbjct: 198 IQAKEVMHNKNNVTSIIAGCTSRSFEQVLKDIDRDRYMSPIEAVEYGLIDGVI 250
>AT1G12410.1 | chr1:4223099-4224954 FORWARD LENGTH=280
Length = 279
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 87/174 (50%), Gaps = 10/174 (5%)
Query: 171 RIIFLGMPIVPAVTELIAAQFLWLDYDDRTKPIYLYINSTGTMDENNELVASETDAFAIA 230
R+IF+G I + I A L+LD D ++ IY+Y+N G T + AI
Sbjct: 98 RVIFIGQNIDEEFSNQILATMLYLDTLDDSRRIYMYLNGPG---------GDLTPSLAIY 148
Query: 231 DFINRSKSKVYTINLSMAYGQAAMLLSLGVKGKRGVLPNSITKLYLPKVHKSGGAAIDMW 290
D + KS V T + +AY A LL+ G KG R +P S L P + G A D+
Sbjct: 149 DTMKSLKSPVGTHCVGLAYNLAGFLLAAGEKGHRFAMPLSRIALQSP-AGAARGQADDIQ 207
Query: 291 IKAKELDTNTDYYLELLSKGVGKPKEELAEFLKGPRYFRAQEAIDYGLADTILH 344
+AKEL DY L+K G+P E + + L + F A+EAI+YGL D I+
Sbjct: 208 NEAKELSRIRDYLFNELAKNTGQPAERVFKDLSRVKRFNAEEAIEYGLIDKIVR 261
>AT1G66670.1 | chr1:24863995-24865646 REVERSE LENGTH=310
Length = 309
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 88/173 (50%), Gaps = 10/173 (5%)
Query: 171 RIIFLGMPIVPAVTELIAAQFLWLDYDDRTKPIYLYINSTGTMDENNELVASETDAFAIA 230
RI+FLG + +L+ +Q L LD +D + I L+INS G S T I
Sbjct: 94 RIVFLGSQVDDMTADLVISQLLLLDAEDSERDITLFINSPG---------GSITAGMGIY 144
Query: 231 DFINRSKSKVYTINLSMAYGQAAMLLSLGVKGKRGVLPNSITKLYLPKVHKSGGAAIDMW 290
D + + K+ V T+ L +A A LL+ G KGKR +PNS ++ P + +GG A +M
Sbjct: 145 DAMKQCKADVSTVCLGLAASMGAFLLASGSKGKRYCMPNSKVMIHQP-LGTAGGKATEMS 203
Query: 291 IKAKELDTNTDYYLELLSKGVGKPKEELAEFLKGPRYFRAQEAIDYGLADTIL 343
I+ +E+ + ++ S+ GKP+ E+ + EA +YGL D ++
Sbjct: 204 IRIREMMYHKIKLNKIFSRITGKPESEIESDTDRDNFLNPWEAKEYGLIDAVI 256
>AT5G23140.1 | chr5:7783811-7784826 FORWARD LENGTH=242
Length = 241
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 88/173 (50%), Gaps = 10/173 (5%)
Query: 171 RIIFLGMPIVPAVTELIAAQFLWLDYDDRTKPIYLYINSTGTMDENNELVASETDAFAIA 230
RII + PI + ++ AQ L+L+ ++ +KPI++Y+NS G T AI
Sbjct: 57 RIICINGPINDDTSHVVVAQLLYLESENPSKPIHMYLNSPG---------GHVTAGLAIY 107
Query: 231 DFINRSKSKVYTINLSMAYGQAAMLLSLGVKGKRGVLPNSITKLYLPKVHKSGGAAIDMW 290
D + +S + TI L A A++LL+ G KG+R LPN+ ++ P SG A D+
Sbjct: 108 DTMQYIRSPISTICLGQAASMASLLLAAGAKGQRRSLPNATVMIHQPSGGYSGQAK-DIT 166
Query: 291 IKAKELDTNTDYYLELLSKGVGKPKEELAEFLKGPRYFRAQEAIDYGLADTIL 343
I K++ D EL K G+P + +A + + +EA +G+ D ++
Sbjct: 167 IHTKQIVRVWDALNELYVKHTGQPLDVVANNMDRDHFMTPEEAKAFGIIDEVI 219
>AT1G11750.2 | chr1:3967609-3969535 FORWARD LENGTH=290
Length = 289
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 84/175 (48%), Gaps = 10/175 (5%)
Query: 171 RIIFLGMPIVPAVTELIAAQFLWLDYDDRTKPIYLYINSTGTMDENNELVASETDAFAIA 230
RIIF+G PI V + + +Q + L D I +Y+N G S AI
Sbjct: 123 RIIFIGQPINAQVAQRVISQLVTLASIDDKSDILMYLNCPG---------GSTYSVLAIY 173
Query: 231 DFINRSKSKVYTINLSMAYGQAAMLLSLGVKGKRGVLPNSITKLYLPKVHKSGGAAIDMW 290
D ++ K KV T+ +A Q A+LL+ G KG R +PN+ ++ P+ GG D+
Sbjct: 174 DCMSWIKPKVGTVAFGVAASQGALLLAGGEKGMRYAMPNTRVMIHQPQT-GCGGHVEDVR 232
Query: 291 IKAKELDTNTDYYLELLSKGVGKPKEELAEFLKGPRYFRAQEAIDYGLADTILHS 345
+ E + + G+P E++ ++ + R+ A EA+++GL D +L +
Sbjct: 233 RQVNEAIEARQKIDRMYAAFTGQPLEKVQQYTERDRFLSASEALEFGLIDGLLET 287
>AT1G02560.1 | chr1:538000-539805 FORWARD LENGTH=299
Length = 298
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 87/182 (47%), Gaps = 10/182 (5%)
Query: 171 RIIFLGMPIVPAVTELIAAQFLWLDYDDRTKPIYLYINSTGTMDENNELVASETDAFAIA 230
RII G + + +I AQ L+LD D TK I +Y+NS G S T AI
Sbjct: 123 RIIRCGGAVDDDMANIIVAQLLYLDAVDPTKDIVMYVNSPG---------GSVTAGMAIF 173
Query: 231 DFINRSKSKVYTINLSMAYGQAAMLLSLGVKGKRGVLPNSITKLYLPKVHKSGGAAIDMW 290
D + + V T+ + +A A LLS G KGKR LPNS ++ P GG D+
Sbjct: 174 DTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQT-DID 232
Query: 291 IKAKELDTNTDYYLELLSKGVGKPKEELAEFLKGPRYFRAQEAIDYGLADTILHSLDGSF 350
I+A E+ + L+ G+ E++ + + A+EA +YGL D ++ + +
Sbjct: 233 IQANEMLHHKANLNGYLAYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKAL 292
Query: 351 KP 352
+P
Sbjct: 293 QP 294
>ATCG00670.1 | chrC:69910-71882 REVERSE LENGTH=197
Length = 196
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 75/172 (43%), Gaps = 9/172 (5%)
Query: 171 RIIFLGMPIVPAVTELIAAQFLWLDYDDRTKPIYLYINSTGTMDENNELVASETDAFAIA 230
R+ FLG + ++ + + ++L + TK +YL+INS G AI
Sbjct: 31 RLFFLGQEVDTEISNQLISLMIYLSIEKDTKDLYLFINSPG---------GWVISGMAIY 81
Query: 231 DFINRSKSKVYTINLSMAYGQAAMLLSLGVKGKRGVLPNSITKLYLPKVHKSGGAAIDMW 290
D + + V TI + +A A+ +L G KR P++ ++ P +
Sbjct: 82 DTMQFVRPDVQTICMGLAASIASFILVGGAITKRIAFPHARVMIHQPASSFYEAQTGEFI 141
Query: 291 IKAKELDTNTDYYLELLSKGVGKPKEELAEFLKGPRYFRAQEAIDYGLADTI 342
++A+EL + + + GKP ++E ++ + A EA +G+ D +
Sbjct: 142 LEAEELLKLRETITRVYVQRTGKPIWVISEDMERDVFMSATEAQAHGIVDLV 193
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.317 0.135 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,915,270
Number of extensions: 271591
Number of successful extensions: 712
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 700
Number of HSP's successfully gapped: 11
Length of query: 386
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 286
Effective length of database: 8,364,969
Effective search space: 2392381134
Effective search space used: 2392381134
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 113 (48.1 bits)