BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0591600 Os05g0591600|Os05g0591600
(275 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G53450.1 | chr3:19812977-19815430 REVERSE LENGTH=216 288 2e-78
AT5G06300.1 | chr5:1922042-1925278 REVERSE LENGTH=218 286 1e-77
AT2G37210.2 | chr2:15624253-15626834 REVERSE LENGTH=240 282 1e-76
AT2G28305.1 | chr2:12081186-12084307 FORWARD LENGTH=214 271 2e-73
AT2G35990.1 | chr2:15114070-15116647 FORWARD LENGTH=214 262 1e-70
AT4G35190.1 | chr4:16746724-16748090 FORWARD LENGTH=229 244 4e-65
AT5G11950.1 | chr5:3855072-3856815 FORWARD LENGTH=217 235 2e-62
AT5G03270.1 | chr5:781870-783997 FORWARD LENGTH=230 216 2e-56
AT5G26140.1 | chr5:9130796-9131636 FORWARD LENGTH=144 127 5e-30
>AT3G53450.1 | chr3:19812977-19815430 REVERSE LENGTH=216
Length = 215
Score = 288 bits (736), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 145/199 (72%), Positives = 160/199 (80%), Gaps = 12/199 (6%)
Query: 60 ICVYCGSAKGKKPSYQDAAVDLGKELVERGIDLVYGGGSIGLMGLVSHAVHAGGRHVIGI 119
ICV+CGS++GKK SYQDAAVDLG ELV R IDLVYGGGSIGLMGLVS AVH GGRHVIG+
Sbjct: 16 ICVFCGSSQGKKSSYQDAAVDLGNELVLRNIDLVYGGGSIGLMGLVSQAVHDGGRHVIGV 75
Query: 120 IPKSLMPREVTGEPVGEVRAVSGMHERKAEMARFADAFIALPVIDPYPKMLGGYGTXXXX 179
IPK+LMPRE+TGE VGEVRAV+ MH+RKAEMAR +DAFIALP GGYGT
Sbjct: 76 IPKTLMPRELTGETVGEVRAVADMHQRKAEMARHSDAFIALP---------GGYGTLEEL 126
Query: 180 XXVITWAQLGIHKKPVGLLNVDGFYNPLLSFIDLAVNEGFITEEARRIIISAPTAKELVM 239
VITWAQLGIH KPVGLLNVDG+YN LLSFID AV EGFI+ AR+IIISAPTAKELV
Sbjct: 127 LEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEGFISTNARQIIISAPTAKELVK 186
Query: 240 KLEDYVPEY---SIGLVWE 255
KLE+Y P + + L WE
Sbjct: 187 KLEEYSPCHESVATKLCWE 205
>AT5G06300.1 | chr5:1922042-1925278 REVERSE LENGTH=218
Length = 217
Score = 286 bits (731), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 139/203 (68%), Positives = 166/203 (81%), Gaps = 12/203 (5%)
Query: 60 ICVYCGSAKGKKPSYQDAAVDLGKELVERGIDLVYGGGSIGLMGLVSHAVHAGGRHVIGI 119
ICV+CGS+ GKKPSYQ+AA+ LG ELVER IDLVYGGGS+GLMGLVS AVH GGRHV+G+
Sbjct: 11 ICVFCGSSSGKKPSYQEAAIQLGNELVERRIDLVYGGGSVGLMGLVSQAVHHGGRHVLGV 70
Query: 120 IPKSLMPREVTGEPVGEVRAVSGMHERKAEMARFADAFIALPVIDPYPKMLGGYGTXXXX 179
IPK+LMPRE+TGE +GEV+AV+ MH+RKAEMAR ADAFIALP GGYGT
Sbjct: 71 IPKTLMPREITGETIGEVKAVADMHQRKAEMARQADAFIALP---------GGYGTLEEL 121
Query: 180 XXVITWAQLGIHKKPVGLLNVDGFYNPLLSFIDLAVNEGFITEEARRIIISAPTAKELVM 239
VITWAQLGIH+KPVGLLNVDG+YN LL+FID AV+EGFI+ ARRII+SAP AKELV
Sbjct: 122 LEVITWAQLGIHRKPVGLLNVDGYYNSLLTFIDKAVDEGFISPMARRIIVSAPNAKELVR 181
Query: 240 KLEDYVPEY---SIGLVWEDQNQ 259
+LE+Y PE+ + LVW++ ++
Sbjct: 182 QLEEYEPEFDEITSKLVWDEVDR 204
>AT2G37210.2 | chr2:15624253-15626834 REVERSE LENGTH=240
Length = 239
Score = 282 bits (721), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 144/214 (67%), Positives = 161/214 (75%), Gaps = 18/214 (8%)
Query: 60 ICVYCGSAKGKKPSYQDAAVDLGKELVERGIDLVYGGGSIGLMGLVSHAVHAGGRHVIGI 119
ICV+CGS++GKK SYQDAAVDLG ELV R IDLVYGGGSIGLMGLVS AVH GGRHVIGI
Sbjct: 16 ICVFCGSSQGKKSSYQDAAVDLGNELVSRNIDLVYGGGSIGLMGLVSQAVHDGGRHVIGI 75
Query: 120 IPKSLMPREVTGEPVGEVRAVSGMHERKAEMARFADAFIALPVIDPYPKMLG-------- 171
IPK+LMPRE+TGE VGEVRAV+ MH+RKAEMA+ +DAFIALP + K+
Sbjct: 76 IPKTLMPRELTGETVGEVRAVADMHQRKAEMAKHSDAFIALPEENNLVKLKNMLSWSSCS 135
Query: 172 -------GYGTXXXXXXVITWAQLGIHKKPVGLLNVDGFYNPLLSFIDLAVNEGFITEEA 224
GYGT VITWAQLGIH KPVGLLNVDG+YN LLSFID AV EGFI+ A
Sbjct: 136 VKATLKSGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEGFISPTA 195
Query: 225 RRIIISAPTAKELVMKLEDYVPEY---SIGLVWE 255
R II+SAPTAKELV KLE+Y P + + L WE
Sbjct: 196 REIIVSAPTAKELVKKLEEYAPCHERVATKLCWE 229
>AT2G28305.1 | chr2:12081186-12084307 FORWARD LENGTH=214
Length = 213
Score = 271 bits (694), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 133/189 (70%), Positives = 153/189 (80%), Gaps = 9/189 (4%)
Query: 60 ICVYCGSAKGKKPSYQDAAVDLGKELVERGIDLVYGGGSIGLMGLVSHAVHAGGRHVIGI 119
ICV+CGS+ G K SY+DAA++LG ELV R IDLVYGGGSIGLMGL+S AV GGRHVIG+
Sbjct: 10 ICVFCGSSAGNKVSYKDAAIELGTELVSRNIDLVYGGGSIGLMGLISQAVFNGGRHVIGV 69
Query: 120 IPKSLMPREVTGEPVGEVRAVSGMHERKAEMARFADAFIALPVIDPYPKMLGGYGTXXXX 179
IPK+LMPRE+TGE VGEV+AV+ MH+RKAEMA+ +DAFIALP GGYGT
Sbjct: 70 IPKTLMPREITGETVGEVKAVADMHQRKAEMAKHSDAFIALP---------GGYGTLEEL 120
Query: 180 XXVITWAQLGIHKKPVGLLNVDGFYNPLLSFIDLAVNEGFITEEARRIIISAPTAKELVM 239
VITWAQLGIH KPVGLLNV+G+YN LLSFID AV EGFI+ AR II+SAP+AKELV
Sbjct: 121 LEVITWAQLGIHDKPVGLLNVEGYYNSLLSFIDKAVEEGFISPTARHIIVSAPSAKELVK 180
Query: 240 KLEDYVPEY 248
KLEDYVP +
Sbjct: 181 KLEDYVPRH 189
>AT2G35990.1 | chr2:15114070-15116647 FORWARD LENGTH=214
Length = 213
Score = 262 bits (670), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 127/200 (63%), Positives = 153/200 (76%), Gaps = 12/200 (6%)
Query: 60 ICVYCGSAKGKKPSYQDAAVDLGKELVERGIDLVYGGGSIGLMGLVSHAVHAGGRHVIGI 119
ICV+CGS+ G K +Y DAA+ L +LVER IDLVYGGGS+GLMGL+S AVH GGRHV+GI
Sbjct: 11 ICVFCGSSSGNKTTYHDAALQLAHQLVERNIDLVYGGGSVGLMGLISQAVHDGGRHVLGI 70
Query: 120 IPKSLMPREVTGEPVGEVRAVSGMHERKAEMARFADAFIALPVIDPYPKMLGGYGTXXXX 179
IPKSL PRE+TGE +GEV VS MH+RKAEM R ADAFIALP GGYGT
Sbjct: 71 IPKSLAPREITGESIGEVITVSTMHQRKAEMGRQADAFIALP---------GGYGTFEEL 121
Query: 180 XXVITWAQLGIHKKPVGLLNVDGFYNPLLSFIDLAVNEGFITEEARRIIISAPTAKELVM 239
VITW+QLGIH KPVGLLNVDGFY+ LL+FID AV+EGF++ ARRII+SAP A +L+
Sbjct: 122 LEVITWSQLGIHTKPVGLLNVDGFYDSLLTFIDKAVDEGFVSSTARRIIVSAPNAPQLLQ 181
Query: 240 KLEDYVP---EYSIGLVWED 256
LE+YVP ++ +VW++
Sbjct: 182 LLEEYVPKHDDFVSKMVWDN 201
>AT4G35190.1 | chr4:16746724-16748090 FORWARD LENGTH=229
Length = 228
Score = 244 bits (623), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 120/187 (64%), Positives = 139/187 (74%), Gaps = 9/187 (4%)
Query: 60 ICVYCGSAKGKKPSYQDAAVDLGKELVERGIDLVYGGGSIGLMGLVSHAVHAGGRHVIGI 119
+CV+CGS+ GK+ Y DAA DL +ELV R ++LVYGGGSIGLMGLVS AVH G HV+GI
Sbjct: 11 VCVFCGSSSGKRECYSDAATDLAQELVTRRLNLVYGGGSIGLMGLVSQAVHEAGGHVLGI 70
Query: 120 IPKSLMPREVTGEPVGEVRAVSGMHERKAEMARFADAFIALPVIDPYPKMLGGYGTXXXX 179
IP++LM +E+TGE GEV AV+ MHERKAEMAR +D FIALP GGYGT
Sbjct: 71 IPRTLMDKEITGETYGEVIAVADMHERKAEMARHSDCFIALP---------GGYGTLEEL 121
Query: 180 XXVITWAQLGIHKKPVGLLNVDGFYNPLLSFIDLAVNEGFITEEARRIIISAPTAKELVM 239
VI WAQLGIH KPVGLLNVDG+YN LL+FID AV++GFI R I +SAP AKELV
Sbjct: 122 LEVIAWAQLGIHDKPVGLLNVDGYYNYLLTFIDKAVDDGFIKPSQRHIFVSAPNAKELVQ 181
Query: 240 KLEDYVP 246
KLE Y P
Sbjct: 182 KLEAYKP 188
>AT5G11950.1 | chr5:3855072-3856815 FORWARD LENGTH=217
Length = 216
Score = 235 bits (599), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 115/189 (60%), Positives = 142/189 (75%), Gaps = 9/189 (4%)
Query: 60 ICVYCGSAKGKKPSYQDAAVDLGKELVERGIDLVYGGGSIGLMGLVSHAVHAGGRHVIGI 119
ICV+CGS G + + DAA++LG ELV+R IDLVYGGGS+GLMGL+S V+ GG HV+GI
Sbjct: 12 ICVFCGSHSGHREVFSDAAIELGNELVKRKIDLVYGGGSVGLMGLISRRVYEGGLHVLGI 71
Query: 120 IPKSLMPREVTGEPVGEVRAVSGMHERKAEMARFADAFIALPVIDPYPKMLGGYGTXXXX 179
IPK+LMP E++GE VG+VR V+ MHERKA MA+ A+AFIALP GGYGT
Sbjct: 72 IPKALMPIEISGETVGDVRVVADMHERKAAMAQEAEAFIALP---------GGYGTMEEL 122
Query: 180 XXVITWAQLGIHKKPVGLLNVDGFYNPLLSFIDLAVNEGFITEEARRIIISAPTAKELVM 239
+ITW+QLGIHKK VGLLNVDG+YN LL+ D V EGFI AR I++SAPTAKEL+
Sbjct: 123 LEMITWSQLGIHKKTVGLLNVDGYYNNLLALFDTGVEEGFIKPGARNIVVSAPTAKELME 182
Query: 240 KLEDYVPEY 248
K+E+Y P +
Sbjct: 183 KMEEYTPSH 191
>AT5G03270.1 | chr5:781870-783997 FORWARD LENGTH=230
Length = 229
Score = 216 bits (549), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 120/213 (56%), Positives = 142/213 (66%), Gaps = 32/213 (15%)
Query: 60 ICVYCGSAKGKKPSYQDAAVDLGKELVERGIDLVYGGGSIGLMGLVSHAVHAGGR----- 114
ICV+CGS+ G K SYQDAA+DL KELV R IDLVYGGGSIGLMGLVS AVH GGR
Sbjct: 21 ICVFCGSSNGNKASYQDAAIDLAKELVMRKIDLVYGGGSIGLMGLVSQAVHDGGRHNNNN 80
Query: 115 ---------HVIGIIPKSLMPREVTGEPVGEVRAVSGMHERKAEMARFADAFIALPVIDP 165
H + + S ++TGE VGEV+ V+ MH+RKA MA+ +DAFI LP
Sbjct: 81 NGNDDALFCHSVNV---SQTNSKLTGETVGEVKEVADMHQRKAVMAKHSDAFITLP---- 133
Query: 166 YPKMLGGYGTXXXXXXVITWAQLGIHKKPVGLLNVDGFYNPLLSFIDLAVNEGFITEEAR 225
GGYGT VITWAQLGIH KPVGLLNVDG+Y+ LL FID AV EGFI AR
Sbjct: 134 -----GGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYDALLLFIDKAVEEGFILPTAR 188
Query: 226 RIIISAPTAKELVMKLE------DYVPEYSIGL 252
II+SAPTA+EL +KLE D + ++++ L
Sbjct: 189 HIIVSAPTARELFIKLELNMVSLDRISKHALSL 221
>AT5G26140.1 | chr5:9130796-9131636 FORWARD LENGTH=144
Length = 143
Score = 127 bits (320), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 69/121 (57%), Positives = 83/121 (68%), Gaps = 10/121 (8%)
Query: 129 VTGEPVGEVRAVSGMHERKAEMARFADAFIALPVIDPYPKMLG-GYGTXXXXXXVITWAQ 187
++GE VGEVR VS MHERKA MA+ A AFIAL LG Y T +ITWAQ
Sbjct: 6 ISGETVGEVRIVSDMHERKATMAQEAGAFIAL---------LGERYETMEELLEMITWAQ 56
Query: 188 LGIHKKPVGLLNVDGFYNPLLSFIDLAVNEGFITEEARRIIISAPTAKELVMKLEDYVPE 247
LGIHKK VGLLNVDG+YN LL+F D V EGFI + A I++SAP+A+EL+ K+E Y P
Sbjct: 57 LGIHKKTVGLLNVDGYYNNLLAFFDTGVEEGFIKQGACNIVVSAPSARELMEKMELYTPS 116
Query: 248 Y 248
+
Sbjct: 117 H 117
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.137 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,100,464
Number of extensions: 211745
Number of successful extensions: 445
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 435
Number of HSP's successfully gapped: 9
Length of query: 275
Length of database: 11,106,569
Length adjustment: 97
Effective length of query: 178
Effective length of database: 8,447,217
Effective search space: 1503604626
Effective search space used: 1503604626
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 111 (47.4 bits)