BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0583500 Os05g0583500|AK100131
(1136 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G15240.2 | chr1:5243799-5248604 FORWARD LENGTH=1021 397 e-110
AT2G15900.1 | chr2:6927390-6932535 FORWARD LENGTH=995 243 4e-64
>AT1G15240.2 | chr1:5243799-5248604 FORWARD LENGTH=1021
Length = 1020
Score = 397 bits (1021), Expect = e-110, Method: Compositional matrix adjust.
Identities = 243/602 (40%), Positives = 331/602 (54%), Gaps = 60/602 (9%)
Query: 12 TVRDLAEEGKKRXXXXXXXXXXXXXXMSLTSSSVWINLPFATALIVLFRYISLDYDFRRK 71
T+RDL +E KKR MSLTSSSV +NL A LI+LFRY +LD + +RK
Sbjct: 9 TIRDLVDEAKKRIVIVVICVVGLSYLMSLTSSSVLVNLTPAVLLIILFRYYTLDSEMKRK 68
Query: 72 STTTTDNDASRALTKTKSIEPNKIPSIQKDG-KSDWKSKVNSPPVEAAIEQFTRHLVTEW 130
+ T+ +S T NK P + K +SDW+SKVNS VE AI+ FTRHL++EW
Sbjct: 69 AAAYTNKPSSSLNAPTL----NKTPELPKAAPRSDWRSKVNSQVVEDAIDHFTRHLISEW 124
Query: 131 VTDLWYSRVTPDKEGPEELINIVNNVLGEISVRARNVNLIALLTRDLIDLICKNLELYHL 190
V DLWYSR+TPDK+GPEEL+ I+N+VLGE+S R RNVNLI LLTRDLID+IC+ +EL+
Sbjct: 125 VLDLWYSRITPDKQGPEELVFIINDVLGELSRRFRNVNLIDLLTRDLIDIICRRVELFRE 184
Query: 191 CQAKIGKEKFVNLSTERRDAELKLTLITENKLHPALFSASAEHKILQSLADGLISVTAKP 250
CQAKI +++ +LS E RD+EL+ + +E+KLHPALFS +EHK+LQ + + LI VT +P
Sbjct: 185 CQAKIERQQRRSLSFEDRDSELRRVMASEDKLHPALFSPESEHKVLQHIVNSLILVTFRP 244
Query: 251 QDLQCYFFRCTARELLACAVMRPVVNLANPRFINERIELLALSHANKAERGVAESLEHAT 310
+DL C FF T REL AC V+RPV+NLANPRFINERIE +S R A E A+
Sbjct: 245 EDLHCAFFHYTVRELFACCVIRPVLNLANPRFINERIEAAVMSRIKTTIRSSAA--EEAS 302
Query: 311 MVKQREPPMPTVDELAALIDPTSSGVELVRFSQDQSKAAPDTQLSNTRHXXXXXXXXXXX 370
+ P D + +DP+ +GVELV+ +Q K + ++ +H
Sbjct: 303 QSEDLSNVSP--DHFSRYMDPSVTGVELVQLKNEQQKNSKKKSATDKQHVKELSKDPLLS 360
Query: 371 XXXXXXXXXXXXXXXXTTXXXXXXXXXXXXXXXGRTTAECYEG--EWAQTMDISSQQKSQ 428
+ G + + G W +D+ SQ+K++
Sbjct: 361 MDTR-------------SSRSWNSFPSTSKIGDGSKDPQGHRGGEGWGDVLDMMSQRKTE 407
Query: 429 ALAPEHLENMWTKGKNY-KSENVKHVARVPSKSSSLGTSPVQQSAPYSTSVGHYPSAPQR 487
LAPEHLE++W KG+NY K E K RVP + +S+ G
Sbjct: 408 TLAPEHLESVWAKGRNYKKKEGGKVDERVPPR--------------WSSKAGDC----NE 449
Query: 488 QTTMSRSDDQHLIKHSTTAAYLNGTNHLRMALSRESADHASQEDFGVDSESSYATEEDEN 547
T +R Q + +N +HL S A +++ S SY +E++E
Sbjct: 450 NTVNARESSQRKV--------VNTDSHL------SSYSSAEEDEEQTKSSHSYTSEDEE- 494
Query: 548 NNVTGLDSPVTRVWDSKSKGNATSSHIHHPLESPGFHKAKKNRSHIGKLKM-TKTSGRKR 606
VTGL+SP TRVWD ++K N S IHHPLE+ G K ++ H ++ SGRKR
Sbjct: 495 -TVTGLNSPGTRVWDGRTKKNLGVSRIHHPLENSGRSLKKTSKGHERYQQVPGHQSGRKR 553
Query: 607 SR 608
SR
Sbjct: 554 SR 555
Score = 381 bits (979), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/419 (47%), Positives = 262/419 (62%), Gaps = 43/419 (10%)
Query: 685 VLEDSYLKLKCEVVGASIVKSGSGMFAVYSVSVTDANGNSWSIKXXXXXXXXXXXXXKEY 744
+L DS+ KL+CEV+GA+IVK S MFAVYSV+VTD + +SWSIK K +
Sbjct: 605 LLVDSFAKLRCEVLGANIVKGSSKMFAVYSVAVTDESNHSWSIKRRFRHFEELHRRLKVF 664
Query: 745 SQYNLHLPPKHFLSSGLEVPVVRERCKLLDIYLKKLLQIPTVSSCIEVWDFLSVDSQTYI 804
+Y LHLPPKHFLS+G+++PV++ERC LLD Y+KKLLQ+ +S IEVWDFLSVDSQTY
Sbjct: 665 PEYKLHLPPKHFLSTGVDIPVIQERCVLLDEYIKKLLQLQRISGSIEVWDFLSVDSQTYA 724
Query: 805 FTDTLSVIQTLSVNLDERSKEKNTKSFNSSQALNGNLVSASQSLHVHKDDTMPKEKDKDF 864
F+ + S+I+TL+V K N + + N+ S +Q
Sbjct: 725 FSSSFSIIETLTV-----------KPVNKTSTVATNIASMTQ------------------ 755
Query: 865 DAVDGLRSRKRNTEQNLGIGVGNTNANLHEDLSGSDPEQ--NEHSFIINSGNSKKTLSSE 922
A G R+ N GI N N+ D S + N+H + + +
Sbjct: 756 -AAPGPLPRRENLSSENGISGQNMRNNVMVDDVKSKVKNLGNDHVKTPDVDVRNRKENGG 814
Query: 923 TDYPPQSLESDGYSVAPNDWMAPNLSVPLFHLVDVVFQLQDGGWIRRQAFWVVKQILQLG 982
Q + + P +W+ P L++PL LVDVVFQLQ+GGWIRR+AFWV KQILQLG
Sbjct: 815 LKVGTQHADDVACAGLPTEWVPPKLTLPLLDLVDVVFQLQEGGWIRRKAFWVAKQILQLG 874
Query: 983 MGDTFDDWLVEKIQLLRKGRIVAFAVKRVEQILWPDGIFLTKHPKRKAATPPPGSQSNGM 1042
MGD DDW++EKI LLR+G +VA ++RVEQILWPDG+F+TKHPKR+ Q + +
Sbjct: 875 MGDALDDWVLEKICLLRRGTVVASGIQRVEQILWPDGVFMTKHPKRQ--------QQSSI 926
Query: 1043 ANYLTDEQRLEDAHRANFVHELMIEKAPSALVSLVGRKEYERCAQDVYFFLQSPVCLKQ 1101
+ +EQ+ E RA FVHELMIEKAP+ +VSL+G+KEYE+CA+D+YFFLQS VCLKQ
Sbjct: 927 SE---EEQKQEAERRAKFVHELMIEKAPATIVSLIGQKEYEQCAEDLYFFLQSSVCLKQ 982
>AT2G15900.1 | chr2:6927390-6932535 FORWARD LENGTH=995
Length = 994
Score = 243 bits (620), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 159/459 (34%), Positives = 230/459 (50%), Gaps = 56/459 (12%)
Query: 691 LKLKCEVVGASIVKSGSGMFAVYSVSVTDANGNSWSIKXXXXXXXXXXXXXKEYSQYNLH 750
LKLKC V+GA K GS FAVYS++VTD +W +K KE YNL
Sbjct: 511 LKLKCRVLGAYFEKQGSKSFAVYSIAVTDVENKTWFVKRRYSNFERLHRQLKEIPNYNLQ 570
Query: 751 LPPKHFLSSGLEVPVVRERCKLLDIYLKKLLQIPTVSSCIEVWDFLSVDSQTYIFTDTLS 810
LPPK SS E V RC LD YL+ LL I V+ EVWDFLS S+ Y F + S
Sbjct: 571 LPPKRIFSSSTEDAFVHRRCIQLDKYLQDLLCIANVAEQHEVWDFLSAASKNYSFGKSSS 630
Query: 811 VIQTLSVNLDERSKEKNTKSFNSSQALNGNLVSASQSLHVHKD--------DTMPKEKDK 862
V++TL+VN+D+ + + S L +V + H H + + + +
Sbjct: 631 VMKTLAVNVDDAMDDIVRQFKGVSDGLMRKVVGSPLDEHDHAPTRHLSWSVNEISTQLSR 690
Query: 863 DFDAVDGLRSRKRNTE-------QNLGIGVGNTNAN-LHEDLS----------------- 897
+ A + + S +TE G G ++ AN H D
Sbjct: 691 E-SATESMHSSISDTEDIDKLGENTQGEGRFDSEANGWHSDNELDSKYVPPRVVRRLGEP 749
Query: 898 GSDPEQNEHSFIINSGNSKKTLSSETDY----PPQSLESDGYSVAPNDWMAPNLSVPLFH 953
S P + E+ F +K + TD+ P +L + + + +WM PN+SVP+ +
Sbjct: 750 ESSPSEKENDF-----KAKSQVRGSTDFQHADPLTALVQNPHGIP--EWMPPNVSVPILN 802
Query: 954 LVDVVFQLQDGGWIRRQAFWVVKQILQLGMGDTFDDWLVEKIQLLRKGRIVAFAVKRVEQ 1013
LVD VFQL GW+RRQ FW+ KQILQL M D DD L+ +I LR +A ++ +
Sbjct: 803 LVDKVFQLNRRGWLRRQVFWISKQILQLVMEDAVDDLLMREICWLRNEDTIAQGIRWAQD 862
Query: 1014 ILWPDGIFLTKHPKRKAAT--PPPGSQSNGMANYL---------TDEQRLEDAHRANFVH 1062
ILWP+G+F T+ + A+ P ++ MA L + EQ+LE RA+ +
Sbjct: 863 ILWPNGVFFTRLNDSQEASDETDPSEKTYQMAGQLGGMKVTKPSSFEQQLEAFRRASEIK 922
Query: 1063 ELMIEKAPSALVSLVGRKEYERCAQDVYFFLQSPVCLKQ 1101
+ + + AP+ALVSLVG +Y RCA+D+++F QS +C+KQ
Sbjct: 923 KFLFDGAPTALVSLVGHNQYRRCARDIFYFTQSNICIKQ 961
Score = 199 bits (505), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 106/280 (37%), Positives = 162/280 (57%), Gaps = 3/280 (1%)
Query: 12 TVRDLAEEGKKRXXXXXXXXXXXXXXMSLTSSSVWINLPFATALIVLFRYISLDYDFRRK 71
T++DL EE K R ++ TS W+NLP A + R+ ++FR K
Sbjct: 6 TIQDLIEEAKVRAVWWCLCIFSVTYFLTHTSIYWWLNLPIAILICGGARFFFNHFEFRWK 65
Query: 72 STTTTDNDASRALTKTK-SIEPNKIPSIQKDGKSDWKSKVNSPPVEAAIEQFTRHLVTEW 130
T L K + S+ ++ I + WK K++SP VEAAI F ++ ++
Sbjct: 66 VPATPRQSQLSYLEKKQLSVNDPRLSGIPPPPR--WKKKIDSPVVEAAINDFIDKILNDF 123
Query: 131 VTDLWYSRVTPDKEGPEELINIVNNVLGEISVRARNVNLIALLTRDLIDLICKNLELYHL 190
V +LWYS +TPDKE PE + ++ + LGEISVR + +N++ LLTRD++DLI +LE +
Sbjct: 124 VVNLWYSLITPDKEAPELIRAVIMDALGEISVRVKEINIVDLLTRDIVDLIGDHLESFRR 183
Query: 191 CQAKIGKEKFVNLSTERRDAELKLTLITENKLHPALFSASAEHKILQSLADGLISVTAKP 250
QA IG + LS+E RD LK L+ +L+PAL S +E+K+LQ + G++SV +P
Sbjct: 184 NQAAIGTDVMKTLSSEERDERLKYHLMASGELYPALVSPESEYKVLQKIVAGILSVVLRP 243
Query: 251 QDLQCYFFRCTARELLACAVMRPVVNLANPRFINERIELL 290
++ QC R ARE++ C V++P++NLA P INE E++
Sbjct: 244 REAQCPLVRTIAREIVTCLVIQPLLNLACPERINEVFEII 283
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 71/130 (54%), Gaps = 24/130 (18%)
Query: 411 YEGEWAQTMDISSQQKSQALAPEHLENMWTKGKNYK------------SENVKH--VARV 456
+ +WA+++++++Q++++ L PE+LENMWTKG+NY+ S K VA++
Sbjct: 342 HSADWARSLEVATQRRTEVLRPENLENMWTKGRNYQKKEYKKSLKKGSSTGAKENAVAQL 401
Query: 457 PSKSSSLGTSPVQQSAPYSTSVGH------YPSAPQRQTTMSRSD-DQHLIKHSTTAAYL 509
P K S+ S Q + +S S H Y + +++ SRSD +++ +K S + + L
Sbjct: 402 PPKVSTDKQSQAQMAEEFSKSSLHDGGHQIYEADVRKE---SRSDGNKNRLKRSNSTSDL 458
Query: 510 NGTNHLRMAL 519
N +AL
Sbjct: 459 NLRPETSLAL 468
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.314 0.129 0.372
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 22,771,828
Number of extensions: 923768
Number of successful extensions: 2171
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 2164
Number of HSP's successfully gapped: 6
Length of query: 1136
Length of database: 11,106,569
Length adjustment: 109
Effective length of query: 1027
Effective length of database: 8,118,225
Effective search space: 8337417075
Effective search space used: 8337417075
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 117 (49.7 bits)