BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0582100 Os05g0582100|AK120492
(529 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G34410.1 | chr2:14518719-14522053 FORWARD LENGTH=541 790 0.0
AT5G46340.1 | chr5:18796361-18799725 REVERSE LENGTH=541 781 0.0
AT1G29890.2 | chr1:10463532-10467153 FORWARD LENGTH=585 758 0.0
AT3G06550.2 | chr3:2039408-2042664 REVERSE LENGTH=569 726 0.0
>AT2G34410.1 | chr2:14518719-14522053 FORWARD LENGTH=541
Length = 540
Score = 790 bits (2041), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/529 (71%), Positives = 431/529 (81%), Gaps = 5/529 (0%)
Query: 1 VSFLLGLFPVLIGWIYAEILEYRKSLLYGKVHSDANL---ENETMKEDDKAVLLEGGQSK 57
VSFLLG+ PV I WIY+E LEY++S L+ KVHSD NL KED+ VLLEGG +
Sbjct: 12 VSFLLGVIPVFIAWIYSEFLEYKRSSLHSKVHSDNNLVELGEVKNKEDEGVVLLEGGLPR 71
Query: 58 SPSTKLRNMSTKANLIRFITMDESFLLENRAVLRAMAEVGIILVYFYICDRTNIFPETKK 117
S STK N K NLIRF+T+++SFL+ENRA LRAMAE G IL YFYI DRT++ E+KK
Sbjct: 72 SVSTKFYNSPIKTNLIRFLTLEDSFLIENRATLRAMAEFGAILFYFYISDRTSLLGESKK 131
Query: 118 SYNRDXXXXXXXXXXXXXXXXXXKKHNEKSAFTGKSILYLNRHQTEEWKGWMQVLFLMYH 177
+YNRD KKHN+KS TGKSILYLNRHQTEEWKGWMQVLFLMYH
Sbjct: 132 NYNRDLFLFLYCLLIIVSAMTSLKKHNDKSPITGKSILYLNRHQTEEWKGWMQVLFLMYH 191
Query: 178 YFAATEIYNAIRVFIAAYVWMTGFGNFSYYYIKKDFSIARFAQMMWRLNFFVAFCCIVLD 237
YFAA EIYNAIRVFIAAYVWMTGFGNFSYYYI+KDFS+ARF QMMWRLN FVAF CI+L+
Sbjct: 192 YFAAAEIYNAIRVFIAAYVWMTGFGNFSYYYIRKDFSLARFTQMMWRLNLFVAFSCIILN 251
Query: 238 NDYMLYYICPMHTLFTLMVYGSLGLFNKYNEKPSVMAIKIACCFLTVILIWEIPGVFEFL 297
NDYMLYYICPMHTLFTLMVYG+LG+F++YNE PSVMA+KIA CFL VI++WEIPGVFE
Sbjct: 252 NDYMLYYICPMHTLFTLMVYGALGIFSRYNEIPSVMALKIASCFLVVIVMWEIPGVFEIF 311
Query: 298 WAPFTFLLGYKDPEPSKANLPLLHEWHFRSGLDRYIWIIGMIYAYFHPNVERWMEKLEES 357
W+P TFLLGY DP +K LPLLHEWHFRSGLDRYIWIIGMIYAYFHP VERWMEKLEE
Sbjct: 312 WSPLTFLLGYTDP--AKPELPLLHEWHFRSGLDRYIWIIGMIYAYFHPTVERWMEKLEEC 369
Query: 358 ETKVRLFIKGAIVTLSLTAGYLWYEYIYRLDKITYNKYHPYTSWIPITVYICLRNCTQQL 417
+ K ++ IK +I+ +S GYLWYEYIY+LDK+TYNKYHPYTSWIPITVYICLRN TQQL
Sbjct: 370 DAKRKMSIKTSIIAISSFVGYLWYEYIYKLDKVTYNKYHPYTSWIPITVYICLRNSTQQL 429
Query: 418 RSASLALFAWLGKITLETYISQIHIWLRSSTPNGQPKWLLSFVPDYPLLNFMLTTAIYLL 477
R+ S+ LFAWLGKITLETYISQ HIWLRS+ PNGQPKWLL +P+YP+LNFML TAIY+L
Sbjct: 430 RNFSMTLFAWLGKITLETYISQFHIWLRSNVPNGQPKWLLCIIPEYPMLNFMLVTAIYVL 489
Query: 478 LSYRVFEITGVLKGAFIPSRDNNRLYQNFIAGIAISACLYFCSLILVKI 526
+S+R+FE+T LK FIP++D+ RL N +AG AIS CLY SLIL++I
Sbjct: 490 VSHRLFELTNTLKSVFIPTKDDKRLLHNVLAGAAISFCLYLTSLILLQI 538
>AT5G46340.1 | chr5:18796361-18799725 REVERSE LENGTH=541
Length = 540
Score = 781 bits (2016), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/529 (69%), Positives = 433/529 (81%), Gaps = 5/529 (0%)
Query: 1 VSFLLGLFPVLIGWIYAEILEYRKSLLYGKVHSDANL---ENETMKEDDKAVLLEGGQSK 57
VSFLLG+ P+ +GWIY+E+LEYRKS + K HSD NL + K+DDKA LLEGG ++
Sbjct: 12 VSFLLGVIPIFVGWIYSELLEYRKSWVPLKPHSDNNLVELGDVAEKDDDKADLLEGGLAR 71
Query: 58 SPSTKLRNMSTKANLIRFITMDESFLLENRAVLRAMAEVGIILVYFYICDRTNIFPETKK 117
SPS K N S + N+IRF++M++SFLLE+RA LRAM+E G IL+YFYICDRT + ++ K
Sbjct: 72 SPSVKFHNSSIRTNIIRFLSMEDSFLLEHRATLRAMSEFGAILIYFYICDRTELLGDSTK 131
Query: 118 SYNRDXXXXXXXXXXXXXXXXXXKKHNEKSAFTGKSILYLNRHQTEEWKGWMQVLFLMYH 177
+YNRD +KHN+KS +GKSILYLNRHQTEEWKGWMQVLFLMYH
Sbjct: 132 NYNRDLFLFLYVLLIIVSAMTSLRKHNDKSPISGKSILYLNRHQTEEWKGWMQVLFLMYH 191
Query: 178 YFAATEIYNAIRVFIAAYVWMTGFGNFSYYYIKKDFSIARFAQMMWRLNFFVAFCCIVLD 237
YFAA EIYNAIR+FIAAYVWMTGFGNFSYYY++KDFS+ARFAQMMWRLNFFVAFCCIVL+
Sbjct: 192 YFAAAEIYNAIRIFIAAYVWMTGFGNFSYYYVRKDFSVARFAQMMWRLNFFVAFCCIVLN 251
Query: 238 NDYMLYYICPMHTLFTLMVYGSLGLFNKYNEKPSVMAIKIACCFLTVILIWEIPGVFEFL 297
NDYMLYYICPMHTLFTLMVYG+LG+F+KYNE SVMA+KI CFL V L+WEIPG FE
Sbjct: 252 NDYMLYYICPMHTLFTLMVYGALGIFSKYNEIGSVMALKIFSCFLVVFLLWEIPGAFEIF 311
Query: 298 WAPFTFLLGYKDPEPSKANLPLLHEWHFRSGLDRYIWIIGMIYAYFHPNVERWMEKLEES 357
W P TFLLGY DP +K +L LHEWHFRSGLDRYIWIIGMIYAY+HP VERWMEKLE+
Sbjct: 312 WGPLTFLLGYNDP--AKPDLHRLHEWHFRSGLDRYIWIIGMIYAYYHPTVERWMEKLEDC 369
Query: 358 ETKVRLFIKGAIVTLSLTAGYLWYEYIYRLDKITYNKYHPYTSWIPITVYICLRNCTQQL 417
ETK RL IK AIVT+++ GY+WYE IY+LD+ +YN YHPYTSWIPITVYICLRN T QL
Sbjct: 370 ETKKRLSIKAAIVTITVLVGYVWYECIYKLDRTSYNMYHPYTSWIPITVYICLRNFTHQL 429
Query: 418 RSASLALFAWLGKITLETYISQIHIWLRSSTPNGQPKWLLSFVPDYPLLNFMLTTAIYLL 477
RS SL LFAWLGKITLETYISQ HIWLRS+ P+GQPKWLLS +P YP+LNFMLTTAIY+L
Sbjct: 430 RSVSLTLFAWLGKITLETYISQFHIWLRSNMPDGQPKWLLSIIPGYPMLNFMLTTAIYVL 489
Query: 478 LSYRVFEITGVLKGAFIPSRDNNRLYQNFIAGIAISACLYFCSLILVKI 526
+S+R+FE+T LK F+P++DN RL+ NFIAGIAI+ LY S +L++I
Sbjct: 490 VSHRLFELTNTLKTVFVPTKDNKRLFSNFIAGIAIALPLYCFSFVLLQI 538
>AT1G29890.2 | chr1:10463532-10467153 FORWARD LENGTH=585
Length = 584
Score = 758 bits (1957), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/557 (65%), Positives = 423/557 (75%), Gaps = 44/557 (7%)
Query: 1 VSFLLGLFPVLIGWIYAEILEYRKSLLYGKVHSDANL---ENETMKEDDKAVLLEGGQSK 57
VSFLLG+ P++I W+Y+E LEYR+S + KVHSD NL E T KED+ VL+EGG +
Sbjct: 17 VSFLLGVIPLMIAWLYSEFLEYRRSSFHAKVHSDKNLVELEMVTNKEDEGTVLMEGGLPR 76
Query: 58 SPSTKLRNMSTKANLIRFITMDESFLLENRAVLRAMAEVGIILVYFYICDRTNIFPETKK 117
S S+K + K NLIRF+T+++SFLLENRA LRAMAE G IL+YFYICDRT++ +++K
Sbjct: 77 SASSKFYSSPIKTNLIRFLTLEDSFLLENRATLRAMAEFGAILLYFYICDRTSLIGQSQK 136
Query: 118 SYNRDXXXXXXXXXXXXXXXXXXKKHNEKSAFTGKSILYLNRHQTEEWKGWMQVLFLMYH 177
+Y+RD KKH +KS TGKSILYLNRHQTEEWKGWMQVLFLMYH
Sbjct: 137 NYSRDLFLFLFCLLIIVSAMTSLKKHTDKSPITGKSILYLNRHQTEEWKGWMQVLFLMYH 196
Query: 178 YFAATEIYNAIRVFIAAYVWMTGFGNFSYYYIKKDFSIARFAQ----------------- 220
YFAA E YNAIRVFIA YVWMTGFGNFSYYYI+KDFS+ARF Q
Sbjct: 197 YFAAVEFYNAIRVFIAGYVWMTGFGNFSYYYIRKDFSLARFTQVRSTIFDHHSLFSLPCD 256
Query: 221 ----------------------MMWRLNFFVAFCCIVLDNDYMLYYICPMHTLFTLMVYG 258
MMWRLNFFVAFCCI+L+NDYMLYYICPMHTLFTLMVYG
Sbjct: 257 VLLESTMSFKAQDFYESFYLIQMMWRLNFFVAFCCIILNNDYMLYYICPMHTLFTLMVYG 316
Query: 259 SLGLFNKYNEKPSVMAIKIACCFLTVILIWEIPGVFEFLWAPFTFLLGYKDPEPSKANLP 318
+LG++++YNE SVMA+KIA CFL VIL+WEIPGVFE W+P FLLGY DP +K +LP
Sbjct: 317 ALGIYSQYNEIASVMALKIASCFLVVILMWEIPGVFEIFWSPLAFLLGYTDP--AKPDLP 374
Query: 319 LLHEWHFRSGLDRYIWIIGMIYAYFHPNVERWMEKLEESETKVRLFIKGAIVTLSLTAGY 378
LHEWHFRSGLDRYIWIIGMIYAYFHP VERWMEKLEE + K R+ IK +I+ +S AGY
Sbjct: 375 RLHEWHFRSGLDRYIWIIGMIYAYFHPTVERWMEKLEECDAKRRMSIKTSIIGISSFAGY 434
Query: 379 LWYEYIYRLDKITYNKYHPYTSWIPITVYICLRNCTQQLRSASLALFAWLGKITLETYIS 438
LWYEYIY+LDK+TYNKYHPYTSWIPITVYICLRNCTQQLR SL LFAWLGKITLETYIS
Sbjct: 435 LWYEYIYKLDKVTYNKYHPYTSWIPITVYICLRNCTQQLRRFSLTLFAWLGKITLETYIS 494
Query: 439 QIHIWLRSSTPNGQPKWLLSFVPDYPLLNFMLTTAIYLLLSYRVFEITGVLKGAFIPSRD 498
Q HIWLRSS PNGQPK LLS +P+YP+LNFMLTTAIY+L+S R+FE+T LK FIP++D
Sbjct: 495 QFHIWLRSSVPNGQPKLLLSIIPEYPMLNFMLTTAIYVLVSVRLFELTNTLKSVFIPTKD 554
Query: 499 NNRLYQNFIAGIAISAC 515
+ RL N IA AIS C
Sbjct: 555 DKRLLHNVIAMAAISFC 571
>AT3G06550.2 | chr3:2039408-2042664 REVERSE LENGTH=569
Length = 568
Score = 726 bits (1873), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/531 (64%), Positives = 413/531 (77%), Gaps = 7/531 (1%)
Query: 1 VSFLLGLFPVLIGWIYAEILEYRKSLLYGKV-HSDANL---ENETMKEDDKAVLLE-GGQ 55
+S + G+ PV++ W+Y+E L Y K + K HSD NL + +KEDDKA+L+E GG
Sbjct: 12 MSVVFGIVPVIVAWLYSEYLHYAKYSVSAKTRHSDVNLVEIAKDFVKEDDKALLIEDGGG 71
Query: 56 SKSPSTKLRNMSTKANLIRFITMDESFLLENRAVLRAMAEVGIILVYFYICDRTNIFPET 115
+S S + + +T + LIRF+ +DESFL+ENR LRA+ E +++VYFYICDRT++F +
Sbjct: 72 LQSASPRAKGPTTHSPLIRFVLLDESFLVENRLTLRAIIEFAVLMVYFYICDRTDVFNSS 131
Query: 116 KKSYNRDXXXXXXXXXXXXXXXXXXKKHNEKSAFTGKSILYLNRHQTEEWKGWMQVLFLM 175
KKSYNRD H +KS F+GK+I+YLNRHQTEEWKGWMQVLFLM
Sbjct: 132 KKSYNRDLFLFLYFLLIIVSAITSFTIHTDKSPFSGKAIMYLNRHQTEEWKGWMQVLFLM 191
Query: 176 YHYFAATEIYNAIRVFIAAYVWMTGFGNFSYYYIKKDFSIARFAQMMWRLNFFVAFCCIV 235
YHYFAA E YNAIRVFIA YVWMTGFGNFSYYYI+KDFS+ARFAQMMWRLNF V F CIV
Sbjct: 192 YHYFAAAEYYNAIRVFIACYVWMTGFGNFSYYYIRKDFSLARFAQMMWRLNFLVIFSCIV 251
Query: 236 LDNDYMLYYICPMHTLFTLMVYGSLGLFNKYNEKPSVMAIKIACCFLTVILIWEIPGVFE 295
L+N YMLYYICPMHTLFTLMVYG+LG+ +KYNE SV+A K CF+ VI++WEIPGVFE
Sbjct: 252 LNNSYMLYYICPMHTLFTLMVYGALGIMSKYNEMGSVIAAKFFACFVVVIIVWEIPGVFE 311
Query: 296 FLWAPFTFLLGYKDPEPSKANLPLLHEWHFRSGLDRYIWIIGMIYAYFHPNVERWMEKLE 355
++W+PFT L+GY DP +K LPLLHEWHFRSGLDRYIWIIGM+YAY+HP VE WM+KLE
Sbjct: 312 WIWSPFTLLMGYNDP--AKPQLPLLHEWHFRSGLDRYIWIIGMLYAYYHPTVESWMDKLE 369
Query: 356 ESETKVRLFIKGAIVTLSLTAGYLWYEYIYRLDKITYNKYHPYTSWIPITVYICLRNCTQ 415
E+E K R+ IK ++ ++LT GY WYEYIY++DK+TYNKYHPYTSWIPITVYICLRN TQ
Sbjct: 370 EAEMKFRVAIKTSVALIALTVGYFWYEYIYKMDKLTYNKYHPYTSWIPITVYICLRNITQ 429
Query: 416 QLRSASLALFAWLGKITLETYISQIHIWLRSSTPNGQPKWLLSFVPDYPLLNFMLTTAIY 475
R SL L AWLGKITLETYISQ HIWLRS P+GQPK LLS VPDYPLLNFMLTT+IY
Sbjct: 430 SFRGYSLTLLAWLGKITLETYISQFHIWLRSGVPDGQPKLLLSLVPDYPLLNFMLTTSIY 489
Query: 476 LLLSYRVFEITGVLKGAFIPSRDNNRLYQNFIAGIAISACLYFCSLILVKI 526
+ +SYR+FE+T LK AFIP++D+ RL N I+ + I CLYF S IL+ I
Sbjct: 490 VAISYRLFELTNTLKTAFIPTKDDKRLVYNTISALIICTCLYFFSFILITI 540
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.328 0.142 0.454
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 11,346,022
Number of extensions: 462353
Number of successful extensions: 1351
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 1338
Number of HSP's successfully gapped: 5
Length of query: 529
Length of database: 11,106,569
Length adjustment: 103
Effective length of query: 426
Effective length of database: 8,282,721
Effective search space: 3528439146
Effective search space used: 3528439146
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 114 (48.5 bits)