BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0574300 Os05g0574300|J065204I11
(152 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G45980.1 | chr3:16897492-16897944 REVERSE LENGTH=151 160 3e-40
AT5G59910.1 | chr5:24127206-24127658 FORWARD LENGTH=151 160 3e-40
AT3G46030.1 | chr3:16913614-16914051 REVERSE LENGTH=146 159 4e-40
AT2G28720.1 | chr2:12327043-12327498 FORWARD LENGTH=152 159 6e-40
AT1G07790.1 | chr1:2413049-2413495 FORWARD LENGTH=149 159 7e-40
AT5G22880.1 | chr5:7652130-7652567 REVERSE LENGTH=146 157 2e-39
AT2G37470.1 | chr2:15736832-15737248 FORWARD LENGTH=139 156 5e-39
AT3G53650.1 | chr3:19889358-19889774 FORWARD LENGTH=139 154 2e-38
AT5G02570.1 | chr5:576742-577140 REVERSE LENGTH=133 146 4e-36
AT3G09480.1 | chr3:2914890-2915270 REVERSE LENGTH=127 142 5e-35
AT1G08170.1 | chr1:2562941-2563672 REVERSE LENGTH=244 107 3e-24
>AT3G45980.1 | chr3:16897492-16897944 REVERSE LENGTH=151
Length = 150
Score = 160 bits (405), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 78/92 (84%), Positives = 80/92 (86%)
Query: 61 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXXRYNKKPTITSR 120
SVETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIF RYNKKPTITSR
Sbjct: 59 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLASESSKLARYNKKPTITSR 118
Query: 121 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSA 152
EIQT+VRLVLPGELAKHAVSEGTKAVTKFTS+
Sbjct: 119 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 150
>AT5G59910.1 | chr5:24127206-24127658 FORWARD LENGTH=151
Length = 150
Score = 160 bits (404), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 78/92 (84%), Positives = 80/92 (86%)
Query: 61 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXXRYNKKPTITSR 120
SVETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIF RYNKKPTITSR
Sbjct: 59 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSR 118
Query: 121 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSA 152
EIQT+VRLVLPGELAKHAVSEGTKAVTKFTS+
Sbjct: 119 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 150
>AT3G46030.1 | chr3:16913614-16914051 REVERSE LENGTH=146
Length = 145
Score = 159 bits (403), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 78/92 (84%), Positives = 80/92 (86%)
Query: 61 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXXRYNKKPTITSR 120
SVETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIF RYNKKPTITSR
Sbjct: 54 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLASESSKLARYNKKPTITSR 113
Query: 121 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSA 152
EIQT+VRLVLPGELAKHAVSEGTKAVTKFTS+
Sbjct: 114 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 145
>AT2G28720.1 | chr2:12327043-12327498 FORWARD LENGTH=152
Length = 151
Score = 159 bits (402), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 77/92 (83%), Positives = 79/92 (85%)
Query: 61 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXXRYNKKPTITSR 120
S ETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIF RYNKKPTITSR
Sbjct: 60 STETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSR 119
Query: 121 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSA 152
EIQT+VRLVLPGELAKHAVSEGTKAVTKFTS+
Sbjct: 120 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 151
>AT1G07790.1 | chr1:2413049-2413495 FORWARD LENGTH=149
Length = 148
Score = 159 bits (401), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 77/92 (83%), Positives = 80/92 (86%)
Query: 61 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXXRYNKKPTITSR 120
+VETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIF RYNKKPTITSR
Sbjct: 57 NVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSR 116
Query: 121 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSA 152
EIQT+VRLVLPGELAKHAVSEGTKAVTKFTS+
Sbjct: 117 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 148
>AT5G22880.1 | chr5:7652130-7652567 REVERSE LENGTH=146
Length = 145
Score = 157 bits (397), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 77/92 (83%), Positives = 80/92 (86%)
Query: 61 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXXRYNKKPTITSR 120
+VETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIF RYNKKPTITSR
Sbjct: 54 NVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAGESSKLARYNKKPTITSR 113
Query: 121 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSA 152
EIQT+VRLVLPGELAKHAVSEGTKAVTKFTS+
Sbjct: 114 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 145
>AT2G37470.1 | chr2:15736832-15737248 FORWARD LENGTH=139
Length = 138
Score = 156 bits (394), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 75/90 (83%), Positives = 77/90 (85%)
Query: 62 VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXXRYNKKPTITSRE 121
VETYKIYIFKVLKQVHPD+GIS KAM IMNSFINDIF RYNKKPTITSRE
Sbjct: 49 VETYKIYIFKVLKQVHPDVGISGKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSRE 108
Query: 122 IQTSVRLVLPGELAKHAVSEGTKAVTKFTS 151
IQT+VRLVLPGELAKHAVSEGTKAVTKFTS
Sbjct: 109 IQTAVRLVLPGELAKHAVSEGTKAVTKFTS 138
>AT3G53650.1 | chr3:19889358-19889774 FORWARD LENGTH=139
Length = 138
Score = 154 bits (389), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 74/92 (80%), Positives = 79/92 (85%)
Query: 61 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXXRYNKKPTITSR 120
++ETYKIYIFKVLKQVHPDIGIS KAM IMNSFINDIF RYNKKPTITSR
Sbjct: 47 NIETYKIYIFKVLKQVHPDIGISGKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSR 106
Query: 121 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSA 152
EIQT+VRLVLPGEL+KHAVSEGTKAVTKFTS+
Sbjct: 107 EIQTAVRLVLPGELSKHAVSEGTKAVTKFTSS 138
>AT5G02570.1 | chr5:576742-577140 REVERSE LENGTH=133
Length = 132
Score = 146 bits (368), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 71/86 (82%), Positives = 73/86 (84%)
Query: 67 IYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXXRYNKKPTITSREIQTSV 126
IYIFKVLKQVHPDIGIS KAM IMNSFINDIF RYNKKPTITSREIQT+V
Sbjct: 47 IYIFKVLKQVHPDIGISGKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAV 106
Query: 127 RLVLPGELAKHAVSEGTKAVTKFTSA 152
RLVLPGELAKHAVSEGTKAVTKFTS+
Sbjct: 107 RLVLPGELAKHAVSEGTKAVTKFTSS 132
>AT3G09480.1 | chr3:2914890-2915270 REVERSE LENGTH=127
Length = 126
Score = 142 bits (359), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 69/86 (80%), Positives = 72/86 (83%)
Query: 67 IYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXXRYNKKPTITSREIQTSV 126
IY+FKVLKQVHPDIGIS KAM IMNSFIND F RYNKKPTITSREIQT+V
Sbjct: 41 IYLFKVLKQVHPDIGISGKAMGIMNSFINDTFEKIALESSRLARYNKKPTITSREIQTAV 100
Query: 127 RLVLPGELAKHAVSEGTKAVTKFTSA 152
RLVLPGELAKHAVSEGTKAVTKFTS+
Sbjct: 101 RLVLPGELAKHAVSEGTKAVTKFTSS 126
>AT1G08170.1 | chr1:2562941-2563672 REVERSE LENGTH=244
Length = 243
Score = 107 bits (266), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 45/87 (51%), Positives = 67/87 (77%)
Query: 63 ETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXXRYNKKPTITSREI 122
+ Y+ Y++KV+KQVHPD+GI+SKAM+++N F+ D+F Y K+ T++SREI
Sbjct: 149 DEYRRYVYKVMKQVHPDLGITSKAMTVVNMFMGDMFERIAQEAARLSDYTKRRTLSSREI 208
Query: 123 QTSVRLVLPGELAKHAVSEGTKAVTKF 149
+ +VRLVLPGEL++HAV+EG+KAV+ F
Sbjct: 209 EAAVRLVLPGELSRHAVAEGSKAVSNF 235
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.131 0.357
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 1,328,501
Number of extensions: 28601
Number of successful extensions: 59
Number of sequences better than 1.0e-05: 11
Number of HSP's gapped: 59
Number of HSP's successfully gapped: 11
Length of query: 152
Length of database: 11,106,569
Length adjustment: 90
Effective length of query: 62
Effective length of database: 8,639,129
Effective search space: 535625998
Effective search space used: 535625998
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 107 (45.8 bits)