BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0573500 Os05g0573500|AB095440
(143 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G37060.1 | chr2:15576336-15577660 FORWARD LENGTH=174 176 3e-45
AT3G53340.1 | chr3:19774667-19775991 REVERSE LENGTH=177 175 6e-45
AT4G14540.1 | chr4:8344663-8345148 FORWARD LENGTH=162 165 8e-42
AT2G13570.1 | chr2:5655842-5656489 REVERSE LENGTH=216 163 3e-41
AT5G47640.1 | chr5:19309414-19309986 FORWARD LENGTH=191 162 5e-41
AT2G38880.8 | chr2:16238685-16240316 FORWARD LENGTH=165 159 4e-40
AT2G47810.1 | chr2:19582938-19583420 REVERSE LENGTH=161 143 3e-35
AT5G47670.1 | chr5:19315061-19315975 FORWARD LENGTH=235 140 2e-34
AT1G21970.1 | chr1:7727750-7729571 REVERSE LENGTH=239 129 4e-31
AT1G09030.1 | chr1:2908611-2909030 REVERSE LENGTH=140 124 1e-29
AT5G23090.2 | chr5:7749391-7750203 FORWARD LENGTH=160 66 7e-12
AT5G08190.1 | chr5:2636204-2637125 FORWARD LENGTH=164 64 3e-11
AT2G27470.1 | chr2:11745196-11746375 REVERSE LENGTH=276 47 4e-06
>AT2G37060.1 | chr2:15576336-15577660 FORWARD LENGTH=174
Length = 173
Score = 176 bits (447), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 84/110 (76%), Positives = 94/110 (85%), Gaps = 1/110 (0%)
Query: 21 KEQDRFLPIANIGRIMRRAVPENGKIAKDSKESVQECVSEFISFITSEASDKCLKEKRKT 80
+EQDRFLPIANI RIM+R +P NGKIAKD+KE VQECVSEFISF+TSEASDKC +EKRKT
Sbjct: 29 REQDRFLPIANISRIMKRGLPANGKIAKDAKEIVQECVSEFISFVTSEASDKCQREKRKT 88
Query: 81 INGDDLIWSMGTLGFEDYVEPLKLYLRLYRETEGDTKGSRASELP-VKKD 129
INGDDL+W+M TLGFEDY+EPLK+YL YRE EGDTKGS P KKD
Sbjct: 89 INGDDLLWAMATLGFEDYMEPLKVYLMRYREMEGDTKGSAKGGDPNAKKD 138
>AT3G53340.1 | chr3:19774667-19775991 REVERSE LENGTH=177
Length = 176
Score = 175 bits (444), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 81/110 (73%), Positives = 96/110 (87%), Gaps = 1/110 (0%)
Query: 21 KEQDRFLPIANIGRIMRRAVPENGKIAKDSKESVQECVSEFISFITSEASDKCLKEKRKT 80
+EQDRFLPIANI RIM+R +P NGKIAKD+KE++QECVSEFISF+TSEASDKC +EKRKT
Sbjct: 28 REQDRFLPIANISRIMKRGLPLNGKIAKDAKETMQECVSEFISFVTSEASDKCQREKRKT 87
Query: 81 INGDDLIWSMGTLGFEDYVEPLKLYLRLYRETEGDTKGS-RASELPVKKD 129
INGDDL+W+M TLGFEDY++PLK+YL YRE EGDTKGS + E K+D
Sbjct: 88 INGDDLLWAMATLGFEDYIDPLKVYLMRYREMEGDTKGSGKGGESSAKRD 137
>AT4G14540.1 | chr4:8344663-8345148 FORWARD LENGTH=162
Length = 161
Score = 165 bits (417), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 73/95 (76%), Positives = 87/95 (91%)
Query: 21 KEQDRFLPIANIGRIMRRAVPENGKIAKDSKESVQECVSEFISFITSEASDKCLKEKRKT 80
+EQDRFLPIAN+ RIM++A+P N KI+KD+KE+VQECVSEFISFIT EASDKC +EKRKT
Sbjct: 20 REQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKT 79
Query: 81 INGDDLIWSMGTLGFEDYVEPLKLYLRLYRETEGD 115
INGDDL+W+M TLGFEDYVEPLK+YL+ YRE EG+
Sbjct: 80 INGDDLLWAMTTLGFEDYVEPLKVYLQKYREVEGE 114
>AT2G13570.1 | chr2:5655842-5656489 REVERSE LENGTH=216
Length = 215
Score = 163 bits (412), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 72/95 (75%), Positives = 87/95 (91%)
Query: 21 KEQDRFLPIANIGRIMRRAVPENGKIAKDSKESVQECVSEFISFITSEASDKCLKEKRKT 80
KEQDRFLPIAN+GRIM++ +P NGKI+KD+KE+VQECVSEFISF+T EASDKC +EKRKT
Sbjct: 35 KEQDRFLPIANVGRIMKKVLPGNGKISKDAKETVQECVSEFISFVTGEASDKCQREKRKT 94
Query: 81 INGDDLIWSMGTLGFEDYVEPLKLYLRLYRETEGD 115
INGDD+IW++ TLGFEDYV PLK+YL YR+TEG+
Sbjct: 95 INGDDIIWAITTLGFEDYVAPLKVYLCKYRDTEGE 129
>AT5G47640.1 | chr5:19309414-19309986 FORWARD LENGTH=191
Length = 190
Score = 162 bits (410), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 72/98 (73%), Positives = 88/98 (89%)
Query: 21 KEQDRFLPIANIGRIMRRAVPENGKIAKDSKESVQECVSEFISFITSEASDKCLKEKRKT 80
+EQDRFLPIAN+ RIM++A+P N KI+KD+KE++QECVSEFISF+T EASDKC KEKRKT
Sbjct: 26 REQDRFLPIANVSRIMKKALPANAKISKDAKETMQECVSEFISFVTGEASDKCQKEKRKT 85
Query: 81 INGDDLIWSMGTLGFEDYVEPLKLYLRLYRETEGDTKG 118
INGDDL+W+M TLGFEDYVEPLK+YL+ +RE EG+ G
Sbjct: 86 INGDDLLWAMTTLGFEDYVEPLKVYLQRFREIEGERTG 123
>AT2G38880.8 | chr2:16238685-16240316 FORWARD LENGTH=165
Length = 164
Score = 159 bits (403), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 71/92 (77%), Positives = 84/92 (91%)
Query: 21 KEQDRFLPIANIGRIMRRAVPENGKIAKDSKESVQECVSEFISFITSEASDKCLKEKRKT 80
+EQDR+LPIANI RIM++A+P NGKI KD+K++VQECVSEFISFITSEASDKC KEKRKT
Sbjct: 20 REQDRYLPIANISRIMKKALPPNGKIGKDAKDTVQECVSEFISFITSEASDKCQKEKRKT 79
Query: 81 INGDDLIWSMGTLGFEDYVEPLKLYLRLYRET 112
+NGDDL+W+M TLGFEDY+EPLK+YL YRE
Sbjct: 80 VNGDDLLWAMATLGFEDYLEPLKIYLARYREV 111
>AT2G47810.1 | chr2:19582938-19583420 REVERSE LENGTH=161
Length = 160
Score = 143 bits (361), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 62/95 (65%), Positives = 77/95 (81%)
Query: 21 KEQDRFLPIANIGRIMRRAVPENGKIAKDSKESVQECVSEFISFITSEASDKCLKEKRKT 80
KEQDR LPIAN+GRIM+ +P N K++K++KE++QECVSEFISF+T EASDKC KEKRKT
Sbjct: 50 KEQDRLLPIANVGRIMKNILPANAKVSKEAKETMQECVSEFISFVTGEASDKCHKEKRKT 109
Query: 81 INGDDLIWSMGTLGFEDYVEPLKLYLRLYRETEGD 115
+NGDD+ W+M LGF+DY LK YL YR EG+
Sbjct: 110 VNGDDICWAMANLGFDDYAAQLKKYLHRYRVLEGE 144
>AT5G47670.1 | chr5:19315061-19315975 FORWARD LENGTH=235
Length = 234
Score = 140 bits (354), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 59/95 (62%), Positives = 80/95 (84%)
Query: 21 KEQDRFLPIANIGRIMRRAVPENGKIAKDSKESVQECVSEFISFITSEASDKCLKEKRKT 80
+EQDRF+PIAN+ RIMRR +P + KI+ DSKE++QECVSE+ISFIT EA+++C +E+RKT
Sbjct: 57 REQDRFMPIANVIRIMRRILPAHAKISDDSKETIQECVSEYISFITGEANERCQREQRKT 116
Query: 81 INGDDLIWSMGTLGFEDYVEPLKLYLRLYRETEGD 115
I +D++W+M LGF+DY+EPL LYL YRE EG+
Sbjct: 117 ITAEDVLWAMSKLGFDDYIEPLTLYLHRYRELEGE 151
>AT1G21970.1 | chr1:7727750-7729571 REVERSE LENGTH=239
Length = 238
Score = 129 bits (325), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 87/122 (71%), Gaps = 2/122 (1%)
Query: 21 KEQDRFLPIANIGRIMRRAVPENGKIAKDSKESVQECVSEFISFITSEASDKCLKEKRKT 80
+EQD+++PIAN+ RIMR+ +P + KI+ D+KE++QECVSE+ISF+T EA+++C +E+RKT
Sbjct: 58 REQDQYMPIANVIRIMRKTLPSHAKISDDAKETIQECVSEYISFVTGEANERCQREQRKT 117
Query: 81 INGDDLIWSMGTLGFEDYVEPLKLYLRLYRETEGDTKGSRASELPVKKDVVLNGDPGSSF 140
I +D++W+M LGF++YV+PL +++ YRE E D + E P + G G F
Sbjct: 118 ITAEDILWAMSKLGFDNYVDPLTVFINRYREIETDRGSALRGEPPSLRQTY--GGNGIGF 175
Query: 141 EG 142
G
Sbjct: 176 HG 177
>AT1G09030.1 | chr1:2908611-2909030 REVERSE LENGTH=140
Length = 139
Score = 124 bits (312), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 74/92 (80%)
Query: 22 EQDRFLPIANIGRIMRRAVPENGKIAKDSKESVQECVSEFISFITSEASDKCLKEKRKTI 81
++DR LPIAN+GR+M++ +P N KI+K++K++VQEC +EFISF+T EAS+KC +E RKT+
Sbjct: 3 DEDRLLPIANVGRLMKQILPSNAKISKEAKQTVQECATEFISFVTCEASEKCHRENRKTV 62
Query: 82 NGDDLIWSMGTLGFEDYVEPLKLYLRLYRETE 113
NGDD+ W++ TLG ++Y + + +L YRE E
Sbjct: 63 NGDDIWWALSTLGLDNYADAVGRHLHKYREAE 94
>AT5G23090.2 | chr5:7749391-7750203 FORWARD LENGTH=160
Length = 159
Score = 65.9 bits (159), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 63/98 (64%), Gaps = 1/98 (1%)
Query: 23 QDRFLPIANIGRIMRRAVPENGKIAKDSKESVQECVSEFISFITSEASDKCLKEKRKTIN 82
+D LP A + +I++ +P + ++A+D+++ + EC EFI+ ++SE++D C KE ++TI
Sbjct: 12 EDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNDVCNKEDKRTIA 71
Query: 83 GDDLIWSMGTLGFEDYVEPL-KLYLRLYRETEGDTKGS 119
+ ++ ++ LGF +Y+E + Y + ET DT+ S
Sbjct: 72 PEHVLKALQVLGFGEYIEEVYAAYEQHKYETMQDTQRS 109
>AT5G08190.1 | chr5:2636204-2637125 FORWARD LENGTH=164
Length = 163
Score = 63.9 bits (154), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 63/98 (64%), Gaps = 1/98 (1%)
Query: 23 QDRFLPIANIGRIMRRAVPENGKIAKDSKESVQECVSEFISFITSEASDKCLKEKRKTIN 82
+D LP A + +I++ +P + ++A+D+++ + EC EFI+ I+SE+++ C KE ++TI
Sbjct: 12 EDASLPKATMTKIIKEMLPADVRVARDAQDLLIECCVEFINLISSESNEVCNKEDKRTIA 71
Query: 83 GDDLIWSMGTLGFEDYVEPL-KLYLRLYRETEGDTKGS 119
+ ++ ++ LGF +YVE + Y + ET D++ S
Sbjct: 72 PEHVLKALQVLGFGEYVEEVYAAYEQHKYETMQDSQRS 109
>AT2G27470.1 | chr2:11745196-11746375 REVERSE LENGTH=276
Length = 275
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 49/85 (57%), Gaps = 5/85 (5%)
Query: 27 LPIANIGRIMRRAVPE-----NGKIAKDSKESVQECVSEFISFITSEASDKCLKEKRKTI 81
LP+A + R++++ + E + I K++ + E FI ++++ A+D C +R+T+
Sbjct: 11 LPLAIVRRVVKKKLSECSPDYDVSIHKEALLAFSESARIFIHYLSATANDFCKDARRQTM 70
Query: 82 NGDDLIWSMGTLGFEDYVEPLKLYL 106
DD+ ++ + F +++EPLK L
Sbjct: 71 KADDVFKALEEMDFSEFLEPLKSSL 95
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.313 0.134 0.377
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,832,155
Number of extensions: 111260
Number of successful extensions: 222
Number of sequences better than 1.0e-05: 13
Number of HSP's gapped: 222
Number of HSP's successfully gapped: 13
Length of query: 143
Length of database: 11,106,569
Length adjustment: 89
Effective length of query: 54
Effective length of database: 8,666,545
Effective search space: 467993430
Effective search space used: 467993430
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 106 (45.4 bits)