BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0568900 Os05g0568900|AK067365
(437 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G27925.1 | chr3:10366659-10368864 REVERSE LENGTH=440 630 0.0
AT5G39830.1 | chr5:15942883-15945676 FORWARD LENGTH=449 286 1e-77
AT4G18370.1 | chr4:10149235-10151051 FORWARD LENGTH=324 195 5e-50
AT5G27660.1 | chr5:9789835-9792235 REVERSE LENGTH=429 127 2e-29
AT2G47940.1 | chr2:19618372-19622164 REVERSE LENGTH=608 82 6e-16
AT1G65640.1 | chr1:24411695-24413527 REVERSE LENGTH=437 67 2e-11
AT5G40200.1 | chr5:16070402-16073101 FORWARD LENGTH=593 62 7e-10
AT5G36950.1 | chr5:14594992-14598216 FORWARD LENGTH=587 58 9e-09
AT1G28320.1 | chr1:9920673-9924347 REVERSE LENGTH=710 58 1e-08
AT5G40560.1 | chr5:16244543-16246519 FORWARD LENGTH=411 56 3e-08
AT1G65630.1 | chr1:24406542-24409068 REVERSE LENGTH=560 52 7e-07
>AT3G27925.1 | chr3:10366659-10368864 REVERSE LENGTH=440
Length = 439
Score = 630 bits (1624), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 311/338 (92%), Positives = 328/338 (97%)
Query: 100 SASAFVVATPRKLQADELATVRLFQENTPSVVYITNLAVRQDAFTLDVLEVPQGSGSGFV 159
SASAFVV+TP+KLQ DELATVRLFQENTPSVVYITNLAVRQDAFTLDVLEVPQGSGSGFV
Sbjct: 102 SASAFVVSTPKKLQTDELATVRLFQENTPSVVYITNLAVRQDAFTLDVLEVPQGSGSGFV 161
Query: 160 WDKSGHIVTNFHVIRGASDLRVTLADQTVYEAQVVGFDQDKDVAVLRIKAPTDKLRPVPV 219
WDK GHIVTN+HVIRGASDLRVTLADQT ++A+VVGFDQDKDVAVLRI AP +KLRP+PV
Sbjct: 162 WDKQGHIVTNYHVIRGASDLRVTLADQTTFDAKVVGFDQDKDVAVLRIDAPKNKLRPIPV 221
Query: 220 GVSADLLVGQKVFAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGN 279
GVSADLLVGQKVFAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGN
Sbjct: 222 GVSADLLVGQKVFAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGN 281
Query: 280 SGGPLLDSSGNLIGVNTAIYSPSGASSGVGFSIPVDTVGGIVDQLIKFGKVTRPILGIKF 339
SGGPLLDSSG LIG+NTAIYSPSGASSGVGFSIPVDTVGGIVDQL++FGKVTRPILGIKF
Sbjct: 282 SGGPLLDSSGTLIGINTAIYSPSGASSGVGFSIPVDTVGGIVDQLVRFGKVTRPILGIKF 341
Query: 340 APDQSVEQLGLSGVLVLDAPPNGPAGKAGLQSTKRDSYGRLILGDIITSVNGTKVTNGSD 399
APDQSVEQLG+SGVLVLDAPP+GPAGKAGLQSTKRD YGRL+LGDIITSVNGTKV+NGSD
Sbjct: 342 APDQSVEQLGVSGVLVLDAPPSGPAGKAGLQSTKRDGYGRLVLGDIITSVNGTKVSNGSD 401
Query: 400 LYRILDQCKVGEKVTVEVLRGDQKEKIPVILEPKPDES 437
LYRILDQCKVG++VTVEVLRGD KEKI V LEPKPDES
Sbjct: 402 LYRILDQCKVGDEVTVEVLRGDHKEKISVTLEPKPDES 439
>AT5G39830.1 | chr5:15942883-15945676 FORWARD LENGTH=449
Length = 448
Score = 286 bits (733), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 163/328 (49%), Positives = 215/328 (65%), Gaps = 15/328 (4%)
Query: 120 VRLFQENTPSVVYITNLAVRQDAFTLDVLEVPQGSGSGFVWDKSGHIVTNFHVIRGASDL 179
V+LF++NT SVV I ++ +R V+E+P+G+GSG VWD G+IVTN+HVI A
Sbjct: 120 VQLFEKNTYSVVNIFDVTLRPQLKMTGVVEIPEGNGSGVVWDGQGYIVTNYHVIGNALSR 179
Query: 180 RVTLAD-------------QTVYEAQVVGFDQDKDVAVLRIKAPTDKLRPVPVGVSADLL 226
+ D Q +E ++VG D+ KD+AVL++ AP L+P+ VG S L
Sbjct: 180 NPSPGDVVGRVNILASDGVQKNFEGKLVGADRAKDLAVLKVDAPETLLKPIKVGQSNSLK 239
Query: 227 VGQKVFAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLD 286
VGQ+ AIGNPFG DHTLT GVISGL R+I S TG I IQTDAAINPGNSGGPLLD
Sbjct: 240 VGQQCLAIGNPFGFDHTLTVGVISGLNRDIFSQ-TGVTIGGGIQTDAAINPGNSGGPLLD 298
Query: 287 SSGNLIGVNTAIYSPSGASSGVGFSIPVDTVGGIVDQLIKFGKVTRPILGIKFAPDQSVE 346
S GNLIG+NTAI++ +G S+GVGF+IP TV IV QLI+F KV R + I+ APD
Sbjct: 299 SKGNLIGINTAIFTQTGTSAGVGFAIPSSTVLKIVPQLIQFSKVLRAGINIELAPDPVAN 358
Query: 347 QLGL-SGVLVLDAPPNGPAGKAGLQSTKRDSYGRLILGDIITSVNGTKVTNGSDLYRILD 405
QL + +G LVL P A KAGL T R G ++LGDII +V+ V N ++L +ILD
Sbjct: 359 QLNVRNGALVLQVPGKSLAEKAGLHPTSRGFAGNIVLGDIIVAVDDKPVKNKAELMKILD 418
Query: 406 QCKVGEKVTVEVLRGDQKEKIPVILEPK 433
+ VG+KVT+++ RG++ ++ + LE K
Sbjct: 419 EYSVGDKVTLKIKRGNEDLELKISLEEK 446
>AT4G18370.1 | chr4:10149235-10151051 FORWARD LENGTH=324
Length = 323
Score = 195 bits (495), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 116/230 (50%), Positives = 147/230 (63%), Gaps = 18/230 (7%)
Query: 120 VRLFQENTPSVVYITNLAVRQ----DAFTLDVLEVPQGSGSGFVWDKSGHIVTNFHVIR- 174
V LFQ+ +PSVVYI + + + D T + +G+GSGFVWDK GHIVTN+HVI
Sbjct: 92 VNLFQKTSPSVVYIEAIELPKTSSGDILTDEENGKIEGTGSGFVWDKLGHIVTNYHVIAK 151
Query: 175 ------GASDLRVTLAD----QTVYEAQVVGFDQDKDVAVLRIKAPTDKLRPVPVGVSAD 224
G +V+L D + E ++VG D D D+AVL+I+ +L PV +G S D
Sbjct: 152 LATDQFGLQRCKVSLVDAKGTRFSKEGKIVGLDPDNDLAVLKIETEGRELNPVVLGTSND 211
Query: 225 LLVGQKVFAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPL 284
L VGQ FAIGNP+G ++TLT GV+SGL REI S G+ I + IQTDA IN GNSGGPL
Sbjct: 212 LRVGQSCFAIGNPYGYENTLTIGVVSGLGREIPS-PNGKSISEAIQTDADINSGNSGGPL 270
Query: 285 LDSSGNLIGVNTAIYSP--SGASSGVGFSIPVDTVGGIVDQLIKFGKVTR 332
LDS G+ IGVNTA ++ SG SSGV F+IP+DTV V LI +G R
Sbjct: 271 LDSYGHTIGVNTATFTRKGSGMSSGVNFAIPIDTVVRTVPYLIVYGTAYR 320
>AT5G27660.1 | chr5:9789835-9792235 REVERSE LENGTH=429
Length = 428
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/269 (36%), Positives = 139/269 (51%), Gaps = 39/269 (14%)
Query: 133 ITNLAVRQDAFTLDVLEVPQGS---------GSGFVWDKSG------HIVTNFHVIRGAS 177
I N A R ++ L VPQG GSG + D G H+V +F IR +S
Sbjct: 119 IANAAARIGPAVVN-LSVPQGFHGISMGKSIGSGTIIDADGTILTCAHVVVDFQNIRHSS 177
Query: 178 DLRV--TLADQTVYEAQVVGFDQDKDVAVLRIKAPTDKLRPVP---VGVSADLLVGQKVF 232
RV TL D +E VV D D+A+++IK+ T P+P +G S+ L G V
Sbjct: 178 KGRVDVTLQDGRTFEGVVVNADLQSDIALVKIKSKT----PLPTAKLGFSSKLRPGDWVI 233
Query: 233 AIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGNLI 292
A+G P L +T+T G++S + R+ S G ++ +QTD +IN GNSGGPL++ G +I
Sbjct: 234 AVGCPLSLQNTVTAGIVSCVDRKSSDLGLGGKHREYLQTDCSINAGNSGGPLVNLDGEVI 293
Query: 293 GVNTAIYSPSGASSGVGFSIPVDTVGGIVDQLIKFGKVTRPILGIKFAPDQS--VEQLG- 349
GVN A+ G+GFS+P+D+V I++ K G+V RP +G+K + V QL
Sbjct: 294 GVNIMKVL---AADGLGFSVPIDSVSKIIEHFKKSGRVIRPWIGLKMVELNNLIVAQLKE 350
Query: 350 --------LSGVLVLDAPPNGPAGKAGLQ 370
GVLV P PA +AG +
Sbjct: 351 RDPMFPDVERGVLVPTVIPGSPADRAGFK 379
>AT2G47940.1 | chr2:19618372-19622164 REVERSE LENGTH=608
Length = 607
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 134/302 (44%), Gaps = 41/302 (13%)
Query: 154 SGSGFVWDKSGHIVTNFHVIRGASDLRVTL-ADQTVYEAQVVGFDQDKDVAVLRIKAPTD 212
+GS F+ G ++TN H + + ++V D Y A+V+ D D+A+L +++
Sbjct: 143 TGSAFMIG-DGKLLTNAHCVEHDTQVKVKRRGDDRKYVAKVLVRGVDCDIALLSVESEDF 201
Query: 213 KLRPVPVGVSADLLVGQKVFAIGNPFGLDH-TLTTGVISGLRREISSAATGRPIQDVIQT 271
P+ + + V +G P G D ++T GV+S R E++S A G IQ
Sbjct: 202 WKGAEPLRLGHLPRLQDSVTVVGYPLGGDTISVTKGVVS--RIEVTSYAHGSSDLLGIQI 259
Query: 272 DAAINPGNSGGPLLDSSGNLIGVNTAIYSPSGASSGVGFSIPVDTVGGIVDQLIKFGKVT 331
DAAINPGNSGGP + G IGV +Y S + +G+ IP V + + GK T
Sbjct: 260 DAAINPGNSGGPAFNDQGECIGVAFQVYR-SEETENIGYVIPTTVVSHFLTDYERNGKYT 318
Query: 332 -RPILGIKFAPDQSVEQLGL---------SGVLVLDAPPNGPAGKAGLQSTKRDSYGRLI 381
P LG+ Q +E L GVLV P A K L
Sbjct: 319 GYPCLGVLL---QKLENPALRECLKVPTNEGVLVRRVEPTSDASKV------------LK 363
Query: 382 LGDIITSVNGTKV-TNGSDLYR---------ILDQCKVGEKVTVEVLRGDQKEKIPVILE 431
GD+I S + V G+ +R ++ Q G+ + ++R + +K+ V+L
Sbjct: 364 EGDVIVSFDDLHVGCEGTVPFRSSERIAFRYLISQKFAGDIAEIGIIRAGEHKKVQVVLR 423
Query: 432 PK 433
P+
Sbjct: 424 PR 425
>AT1G65640.1 | chr1:24411695-24413527 REVERSE LENGTH=437
Length = 436
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 135/305 (44%), Gaps = 43/305 (14%)
Query: 152 QGSGSGFVWDKSGHIVTNFHVIRGASDLRV-TLADQTVYEAQVVGFDQDKDVAVLRIKAP 210
+ GSGFV I+TN HV+ L+V T Y+AQV + D+A+L I
Sbjct: 98 ESGGSGFVIS-GKKILTNAHVVADHIFLQVRKHGSPTKYKAQVRAIGHECDLAILEIDNE 156
Query: 211 TDKLRPVPVGVSADLLVGQKVFAIGNPFGLDH-TLTTGVISGLRREISSAATGRPIQDVI 269
+P+ + + + V G P G D ++T G +S R E + A G I
Sbjct: 157 EFWEDMIPLELGEIPSLDESVAVFGYPTGGDSVSITKGYVS--RVEYTRYAHGGTTLLAI 214
Query: 270 QTDAAINPGNSGGPLLDSSGNLIGVNTA--IYSPSGASSGVGFSIPVDTVGGI---VDQL 324
QTDAAINPGNSGGP +IG A + ++ +G+ IP + V++
Sbjct: 215 QTDAAINPGNSGGPA------IIGNKMAGVAFQKDPSADNIGYIIPTPVIKHFLTAVEEN 268
Query: 325 IKFGKVTRPILGIKFAPDQSVE---QLG--LSGVLVLDAPPNGPAGKAGLQSTKRDSYGR 379
++G + + + + ++G ++G+L+ + P D+Y R
Sbjct: 269 GQYGGFCTLDISYQLMENSQLRNHFKMGPEMTGILINEINP------------LSDAYKR 316
Query: 380 LILGDIITSV------NGTKVTNGS----DLYRILDQCKVGEKVTVEVLRGDQKEKIPVI 429
L DII ++ N KVT + + + K+ E V ++VLR ++ + ++
Sbjct: 317 LRKDDIILAIDDVLIGNDAKVTFRNKERINFNHFVSMKKLDETVLLQVLRDGKEHEFHIM 376
Query: 430 LEPKP 434
++P P
Sbjct: 377 VKPVP 381
>AT5G40200.1 | chr5:16070402-16073101 FORWARD LENGTH=593
Length = 592
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 122/281 (43%), Gaps = 43/281 (15%)
Query: 166 IVTNFHVIRGASDLRVT-LADQTVYEAQVVGFDQDKDVAVLRIKAPT--DKLRPVPVGVS 222
++TN H + + +++ T Y A V+ + D+A+L + + + PV G
Sbjct: 164 VLTNAHSVEHHTQVKLKKRGSDTKYLATVLAIGTECDIALLTVTDDEFWEGVSPVEFG-- 221
Query: 223 ADLLVGQ-KVFAIGNPFGLDH-TLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNS 280
DL Q V +G P G D ++T+GV+S R EI S G +Q DAAIN GNS
Sbjct: 222 -DLPALQDAVTVVGYPIGGDTISVTSGVVS--RMEILSYVHGSTELLGLQIDAAINSGNS 278
Query: 281 GGPLLDSSGNLIGVNTAIYSPSGASSGVGFSIPVDTVGGIVDQLIKFGKVT-RPILGIKF 339
GGP + G +G+ A + +G+ IP + + K K T P+LGI++
Sbjct: 279 GGPAFNDKGKCVGIAFQSLKHEDAEN-IGYVIPTPVIVHFIQDYEKHDKYTGFPVLGIEW 337
Query: 340 A----PDQSVEQLGLS----GVLVLDAPPNGPAGKAGLQSTKRDSYGRLILGDIITSVNG 391
PD + +G+ GV + P P + L DII S +G
Sbjct: 338 QKMENPDLR-KSMGMESHQKGVRIRRIEPTAPESQV------------LKPSDIILSFDG 384
Query: 392 TKVTN-GSDLYR---------ILDQCKVGEKVTVEVLRGDQ 422
+ N G+ +R ++ Q G+ V+VLR +
Sbjct: 385 VNIANDGTVPFRHGERIGFSYLISQKYTGDSALVKVLRNKE 425
>AT5G36950.1 | chr5:14594992-14598216 FORWARD LENGTH=587
Length = 586
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 142/305 (46%), Gaps = 47/305 (15%)
Query: 152 QGSGSGFVWDKSGH-IVTNFHVIRGASDLRVTLADQTVY---EAQVVGFDQDKDVAVLRI 207
+ GSGFV SG I+TN HV+ S + V ++ E Q VG + D + V+
Sbjct: 138 ESMGSGFVI--SGRKIITNAHVVADHSFVLVRKHGSSIKHRAEVQAVGHECDLAILVVDS 195
Query: 208 KAPTDKLRPVPVGVSADL-LVGQKVFAIGNPFGLDH-TLTTGVISGLRREISSAATGRPI 265
+ + + + +G D+ + + V +G P G D+ ++T GV+S R E + G
Sbjct: 196 EVFWEGMNALELG---DIPFLQEAVAVVGYPQGGDNISVTKGVVS--RVEPTQYVHGATQ 250
Query: 266 QDVIQTDAAINPGNSGGPLLDSSGNLIGVNTAIYSPSGASSGVGFSIPVDTVGGIVDQLI 325
IQ DAAINPGNSGGP + GN + A + SGA + +G+ IP + ++ +
Sbjct: 251 LMAIQIDAAINPGNSGGPAI--MGNKVA-GVAFQNLSGAEN-IGYIIPTPVIKHFINGVE 306
Query: 326 KFGK-VTRPILGIKFAPDQSVE-----QLG--LSGVLVLDAPPNGPAGKAGLQSTKRDSY 377
+ GK + +G+ P ++ E Q+ ++GVLV P A K K+D
Sbjct: 307 ECGKYIGFCSMGVSCQPMENGELRSGFQMSSEMTGVLVSKINPLSDAHKI----LKKD-- 360
Query: 378 GRLILGDIITSVNGTKVTN-GSDLYR---------ILDQCKVGEKVTVEVLRGDQKEKIP 427
D++ + +G + N G+ +R ++ K E V+VLR ++ +
Sbjct: 361 ------DVLLAFDGVPIANDGTVPFRNRERITFDHLVSMKKPDETALVKVLREGKEHEFS 414
Query: 428 VILEP 432
+ L P
Sbjct: 415 ITLRP 419
>AT1G28320.1 | chr1:9920673-9924347 REVERSE LENGTH=710
Length = 709
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 87/156 (55%), Gaps = 25/156 (16%)
Query: 175 GASDLRVTLAD---QTVYEAQVVGFDQDK-DVAVLRIKAPTDKLRPV-------PVGVSA 223
G D+RV L T A VV +++ D+A+L+++ KL+P+ P+G +A
Sbjct: 461 GHRDIRVRLCHLDSWTWCPANVVYICKEQLDIALLQLEYVPGKLQPITANFSSPPLGTTA 520
Query: 224 DLLVGQKVFAIGNPFGLDHTLTTGVISGL---RREISSAATGRPIQD---VIQTDAAINP 277
+ VG +F G GL ++ +GV++ + +R +++ + + + + +++T AA++P
Sbjct: 521 HV-VGHGLF--GPRCGLSPSICSGVVAKVVHAKRRLNTQSISQEVAEFPAMLETTAAVHP 577
Query: 278 GNSGGPLLDSSGNLIGVNTAIYSPSGASSGVGFSIP 313
G SGG +L+SSG++IG+ T S A G G IP
Sbjct: 578 GGSGGAVLNSSGHMIGLVT-----SNARHGAGTVIP 608
>AT5G40560.1 | chr5:16244543-16246519 FORWARD LENGTH=411
Length = 410
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 140/292 (47%), Gaps = 49/292 (16%)
Query: 166 IVTNFHVIRGASDLRVTLADQ---TVYEAQVVGFDQDKDVAVLRIKAPT--DKLRPVPVG 220
I+TN HV+ A+ + V + + Y+A+V ++ D+A+L I++ + + P+ +G
Sbjct: 2 IITNAHVV--ANHILVLVIKRGSPKKYKAEVKAIGRECDLAILVIESKEFWEDMNPLELG 59
Query: 221 VSADL-LVGQKVFAIGNPFGLDH-TLTTGVISGLRREISSAATGRPIQDVIQTDAAINPG 278
D+ + + V IG P G ++ ++T GV+S R E A G IQTDAA+NPG
Sbjct: 60 ---DMPFLQESVNVIGYPTGGENISVTKGVVS--RIESMDYAHGAINLPAIQTDAAMNPG 114
Query: 279 NSGGPLLDSSGN-LIGVNTAIYSPSGASSGVGFSIPVDTVGGIVDQLIKFGK-VTRPILG 336
NSGGP+ GN ++GV + G S+ +G IP V + + K G+ V L
Sbjct: 115 NSGGPV--CIGNKVVGV---AFQTLGHSNNIGCLIPAPVVKHFITGVEKTGQYVGFCSLN 169
Query: 337 IKF----APDQSVEQLG--LSGVLVLDAPPNGPAGKAGLQSTKRDSYGRLILGDIITSVN 390
+ + A +S ++ ++G+L+ + + D+ L D+I S++
Sbjct: 170 LSYQHMDAQTRSHFKMNSEMTGILIYNI------------NQHSDALNILKKYDVILSID 217
Query: 391 GTKVTNG----------SDLYRILDQCKVGEKVTVEVLRGDQKEKIPVILEP 432
G + N + L ++ ++GE + +++LR + + + L P
Sbjct: 218 GVAIENDGTVIIPNRERTRLDDLVSLKQLGETILLKILREGKMHEFNITLRP 269
>AT1G65630.1 | chr1:24406542-24409068 REVERSE LENGTH=560
Length = 559
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 124/270 (45%), Gaps = 49/270 (18%)
Query: 152 QGSGSGFVWDKSGHIVTNFHVIRGASDLRV-TLADQTVYEAQVVGFDQDKDVAVLRIKAP 210
+ +GSGFV I+TN HV+ + ++V T Y+A+V + D+A+L I
Sbjct: 120 ESTGSGFVIS-GKKILTNAHVVANQTSVKVRKHGSTTKYKAKVQAVGHECDLAILEID-- 176
Query: 211 TDK----LRPVPVGVSADLLVGQ-KVFAIGNPFGLDH-TLTTGVISGLRREISSAATGRP 264
DK + P+ +G D+ Q V+ +G P G D +++ GV+S + I + +G
Sbjct: 177 NDKFWEGMNPLELG---DIPSMQDTVYVVGYPKGGDTISVSKGVVSRVG-PIKYSHSGTE 232
Query: 265 IQDVIQTDAAINPGNSGGPLLDSSGNL---IGVNTAIYSPSGASSGVGFSIPVDTVGGIV 321
+ IQ DAAIN GNSGGP++ GN + + YS S +G+ IP + +
Sbjct: 233 LL-AIQIDAAINNGNSGGPVI--MGNKVAGVAFESLCYSDS-----IGYIIPTPVIRHFL 284
Query: 322 DQL------IKFGKVTRPILGIKFAPDQSVEQLGLS----GVLVLDAPPNGPAGKAGLQS 371
+ + + FG + + K DQ + +S G+L+ P K
Sbjct: 285 NAIEESGEDVSFGSIN--LTYQKMDNDQLRKDFKMSDKMTGILINKINPLSDVHKV---- 338
Query: 372 TKRDSYGRLILGDIITSVNGTKVTNGSDLY 401
K+D DII +++G + N S ++
Sbjct: 339 LKKD--------DIILAIDGVPIGNDSSVH 360
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.316 0.137 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,889,092
Number of extensions: 335870
Number of successful extensions: 774
Number of sequences better than 1.0e-05: 11
Number of HSP's gapped: 766
Number of HSP's successfully gapped: 11
Length of query: 437
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 335
Effective length of database: 8,310,137
Effective search space: 2783895895
Effective search space used: 2783895895
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 113 (48.1 bits)