BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0563600 Os05g0563600|AK099313
(272 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G44130.1 | chr5:17761128-17761871 FORWARD LENGTH=248 149 1e-36
AT2G20520.1 | chr2:8840663-8841406 FORWARD LENGTH=248 143 9e-35
AT1G03870.1 | chr1:982625-983368 REVERSE LENGTH=248 143 1e-34
AT5G03170.1 | chr5:752898-753638 REVERSE LENGTH=247 137 6e-33
AT5G60490.1 | chr5:24325916-24326665 REVERSE LENGTH=250 130 8e-31
AT2G04780.1 | chr2:1677488-1678252 FORWARD LENGTH=255 74 6e-14
AT3G60900.1 | chr3:22499573-22500841 REVERSE LENGTH=423 72 2e-13
AT4G12730.1 | chr4:7491598-7492809 REVERSE LENGTH=404 70 1e-12
AT2G45470.1 | chr2:18742797-18744059 REVERSE LENGTH=421 67 1e-11
AT5G55730.1 | chr5:22558375-22560392 REVERSE LENGTH=425 65 3e-11
AT3G46550.1 | chr3:17136612-17137874 REVERSE LENGTH=421 61 6e-10
>AT5G44130.1 | chr5:17761128-17761871 FORWARD LENGTH=248
Length = 247
Score = 149 bits (376), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 77/151 (50%), Positives = 101/151 (66%), Gaps = 2/151 (1%)
Query: 52 NVTAVLEKSGKYTTFLRLLHESRVDTQINSQLMDSYNGLTMFAPTDAAFAALKPGTLNSL 111
N+TA+LEK G++ T +RLL+ +++ QIN Q+ S G+T+ APTD AF LKPGTLN L
Sbjct: 36 NITAILEKGGQFVTLIRLLNTTQIGNQINIQINSSSEGMTVLAPTDNAFQNLKPGTLNKL 95
Query: 112 SSQDQIQLMLYCVLPRFYSLAMLTTLGGPVNTQASGAD--GPYKYKIKPSNNNVNISTGV 169
S DQ++L+LY V P+FY+L L ++ PV TQASG D G Y N VN+STGV
Sbjct: 96 SPDDQVKLILYHVSPKFYTLEDLLSVSNPVRTQASGRDVGGVYGLNFTGQGNQVNVSTGV 155
Query: 170 NWALLSTVVSKDFPLAVYSVDKVPLPYELFG 200
LST + ++ PLAVY VD V LP E+FG
Sbjct: 156 VETRLSTSLRQERPLAVYVVDMVLLPEEMFG 186
>AT2G20520.1 | chr2:8840663-8841406 FORWARD LENGTH=248
Length = 247
Score = 143 bits (361), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 75/152 (49%), Positives = 103/152 (67%), Gaps = 3/152 (1%)
Query: 52 NVTAVLEKSGKYTTFLRLLHESRVDTQINSQLMDSYNGLTMFAPTDAAFAALKPGTLNSL 111
N+TA+LE ++TT ++LL+ ++V Q++ QL S G+T+FAPTD AF LKPGTLNSL
Sbjct: 38 NLTAILEAGHQFTTLIQLLNTTQVGFQVSVQLNSSDQGMTIFAPTDNAFNKLKPGTLNSL 97
Query: 112 SSQDQIQLMLYCVLPRFYSLAMLTTLGGPVNTQASGADGPY---KYKIKPSNNNVNISTG 168
+ Q QIQLMLY ++P++YSL+ L PV TQA+G DG + + +N VN+STG
Sbjct: 98 TYQQQIQLMLYHIIPKYYSLSDLLLASNPVRTQATGQDGGVFGLNFTGQAQSNQVNVSTG 157
Query: 169 VNWALLSTVVSKDFPLAVYSVDKVPLPYELFG 200
V ++ + + FPLAVY VD V LP ELFG
Sbjct: 158 VVETRINNALRQQFPLAVYVVDSVLLPEELFG 189
>AT1G03870.1 | chr1:982625-983368 REVERSE LENGTH=248
Length = 247
Score = 143 bits (360), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 74/150 (49%), Positives = 101/150 (67%), Gaps = 1/150 (0%)
Query: 52 NVTAVLEKSGKYTTFLRLLHESRVDTQINSQLMDSYNGLTMFAPTDAAFAALKPGTLNSL 111
N+TA+LEK G++TTF+ LL+ ++V +Q+N Q+ S G+T+FAPTD AF LKPGTLN L
Sbjct: 39 NLTAILEKGGQFTTFIHLLNITQVGSQVNIQVNSSSEGMTVFAPTDNAFQNLKPGTLNQL 98
Query: 112 SSQDQIQLMLYCVLPRFYSLAMLTTLGGPVNTQASGAD-GPYKYKIKPSNNNVNISTGVN 170
S DQ++L+LY V P++YS+ L ++ PV TQASG D G Y N +N+STG
Sbjct: 99 SPDDQVKLILYHVSPKYYSMDDLLSVSNPVRTQASGRDNGVYGLNFTGQTNQINVSTGYV 158
Query: 171 WALLSTVVSKDFPLAVYSVDKVPLPYELFG 200
+S + + PLAVY VD V LP E+FG
Sbjct: 159 ETRISNSLRQQRPLAVYVVDMVLLPGEMFG 188
>AT5G03170.1 | chr5:752898-753638 REVERSE LENGTH=247
Length = 246
Score = 137 bits (345), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 74/151 (49%), Positives = 100/151 (66%), Gaps = 2/151 (1%)
Query: 52 NVTAVLEKSGKYTTFLRLLHESRVDTQINSQL-MDSYNGLTMFAPTDAAFAALKPGTLNS 110
N+TA+LEK+G++T F+RLL ++ QIN+QL S NGLT+FAPTD AF +LK GTLNS
Sbjct: 36 NITAILEKAGQFTLFIRLLKSTQASDQINTQLNSSSSNGLTVFAPTDNAFNSLKSGTLNS 95
Query: 111 LSSQDQIQLMLYCVLPRFYSLAMLTTLGGPVNTQAS-GADGPYKYKIKPSNNNVNISTGV 169
LS Q ++QL+ + VLP ++ T+ P+ TQA G +G + I S N VNI+TGV
Sbjct: 96 LSDQQKVQLVQFHVLPTLITMPQFQTVSNPLRTQAGDGQNGKFPLNITSSGNQVNITTGV 155
Query: 170 NWALLSTVVSKDFPLAVYSVDKVPLPYELFG 200
A ++ V D LAVY VD+V LP +FG
Sbjct: 156 VSATVANSVYSDKQLAVYQVDQVLLPLAMFG 186
>AT5G60490.1 | chr5:24325916-24326665 REVERSE LENGTH=250
Length = 249
Score = 130 bits (327), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 67/149 (44%), Positives = 98/149 (65%), Gaps = 1/149 (0%)
Query: 52 NVTAVLEKSGKYTTFLRLLHESRVDTQINSQLMDSYNGLTMFAPTDAAFAALKPGTLNSL 111
NVT +LEK+G++T F+RLL + V Q+ QL +S NG+T+FAP+D++F LK GTLNSL
Sbjct: 39 NVTKILEKAGQFTVFIRLLKSTGVANQLYGQLNNSDNGITIFAPSDSSFTGLKAGTLNSL 98
Query: 112 SSQDQIQLMLYCVLPRFYSLAMLTTLGGPVNTQA-SGADGPYKYKIKPSNNNVNISTGVN 170
+ + Q++L+ + V+P + S + T+ P+ TQA ADG + + S N VNI++GV
Sbjct: 99 TDEQQVELIQFHVIPSYVSSSNFQTISNPLRTQAGDSADGHFPLNVTTSGNTVNITSGVT 158
Query: 171 WALLSTVVSKDFPLAVYSVDKVPLPYELF 199
+S V D LAVY VDKV LP ++F
Sbjct: 159 NTTVSGNVYSDGQLAVYQVDKVLLPQQVF 187
>AT2G04780.1 | chr2:1677488-1678252 FORWARD LENGTH=255
Length = 254
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 78/151 (51%), Gaps = 5/151 (3%)
Query: 52 NVTAVLEKSGKYTTFLRLLHESRVDTQINSQLMDSYNGLTMFAPTDAAFAALKPGTLNSL 111
N+T +L +G + TFL L + V +Q ++ G+T+F P D AF A K L++L
Sbjct: 46 NLTELLSVAGPFHTFLDYLLSTGVIETFQNQANNTEEGITIFVPKDDAFKAQKNPPLSNL 105
Query: 112 SSQDQIQLMLYCVLPRFYSLAMLTTL--GGPVNTQASGADGPYKYKIKPSNNNVNISTGV 169
+ QL+L+ LP +YSL+ L GPV+T A G Y K + V I +
Sbjct: 106 TKDQLKQLVLFHALPHYYSLSEFKNLSQSGPVSTFAGGQ---YSLKFTDVSGTVRIDSLW 162
Query: 170 NWALLSTVVSKDFPLAVYSVDKVPLPYELFG 200
+S+ V P+AVY V++V LP +FG
Sbjct: 163 TRTKVSSSVFSTDPVAVYQVNRVLLPEAIFG 193
>AT3G60900.1 | chr3:22499573-22500841 REVERSE LENGTH=423
Length = 422
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 75/149 (50%), Gaps = 4/149 (2%)
Query: 52 NVTAVLEKSGKYTTFLRLLHESRVDTQINSQLMDSYNGLTMFAPTDAAFAALKPGTLNSL 111
N+T +LEK+G TF LL S V S + GLT+FAP+D AF A L +L
Sbjct: 190 NITGLLEKAG-CKTFANLLVSSGVIKTFESTV---EKGLTVFAPSDEAFKARGVPDLTNL 245
Query: 112 SSQDQIQLMLYCVLPRFYSLAMLTTLGGPVNTQASGADGPYKYKIKPSNNNVNISTGVNW 171
+ + + L+ Y L + L T ++T A+ G Y S + V + TGV
Sbjct: 246 TQAEVVSLLEYHALAEYKPKGSLKTNKDAISTLATNGAGKYDLTTSTSGDEVILHTGVGP 305
Query: 172 ALLSTVVSKDFPLAVYSVDKVPLPYELFG 200
+ L+ V + P+ +++VD V LP ELFG
Sbjct: 306 SRLADTVVDETPVVIFTVDNVLLPAELFG 334
>AT4G12730.1 | chr4:7491598-7492809 REVERSE LENGTH=404
Length = 403
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 73/147 (49%), Gaps = 5/147 (3%)
Query: 53 VTAVLEKSGKYTTFLRLLHESRVDTQINSQLMDSYNGLTMFAPTDAAFAALKPGTLNSLS 112
+T +LEK G F +L + D + GLT+F P+D+A P SLS
Sbjct: 191 LTTILEKQG-CKAFSDILKSTGADKTFQDTV---DGGLTVFCPSDSAVGKFMP-KFKSLS 245
Query: 113 SQDQIQLMLYCVLPRFYSLAMLTTLGGPVNTQASGADGPYKYKIKPSNNNVNISTGVNWA 172
++ L+LY +P + SL ML + G VNT A+ + + + ++ +V + T V A
Sbjct: 246 PANKTALVLYHGMPVYQSLQMLRSGNGAVNTLATEGNNKFDFTVQNDGEDVTLETDVVTA 305
Query: 173 LLSTVVSKDFPLAVYSVDKVPLPYELF 199
+ + PL VY +DKV LP E++
Sbjct: 306 KVMGTLKDQEPLIVYKIDKVLLPREIY 332
>AT2G45470.1 | chr2:18742797-18744059 REVERSE LENGTH=421
Length = 420
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 73/149 (48%), Gaps = 4/149 (2%)
Query: 52 NVTAVLEKSGKYTTFLRLLHESRVDTQINSQLMDSYNGLTMFAPTDAAFAALKPGTLNSL 111
N+T +LEK+G TF LL S V S + GLT+FAP+D AF A L L
Sbjct: 189 NITGLLEKAG-CKTFANLLVSSGVLKTYESAV---EKGLTVFAPSDEAFKAEGVPDLTKL 244
Query: 112 SSQDQIQLMLYCVLPRFYSLAMLTTLGGPVNTQASGADGPYKYKIKPSNNNVNISTGVNW 171
+ + + L+ Y L + L T ++T A+ G + S + V + TGV
Sbjct: 245 TQAEVVSLLEYHALAEYKPKGSLKTNKNNISTLATNGAGKFDLTTSTSGDEVILHTGVAP 304
Query: 172 ALLSTVVSKDFPLAVYSVDKVPLPYELFG 200
+ L+ V P+ +++VD V LP ELFG
Sbjct: 305 SRLADTVLDATPVVIFTVDNVLLPAELFG 333
>AT5G55730.1 | chr5:22558375-22560392 REVERSE LENGTH=425
Length = 424
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 59/111 (53%), Gaps = 1/111 (0%)
Query: 89 GLTMFAPTDAAFAALKPGTLNSLSSQDQIQLMLYCVLPRFYSLAMLTTLGGPVNTQASGA 148
G+T+F P D A P N L++ + + + +P +YS+AML + GP+NT A+
Sbjct: 220 GMTVFCPGDDAMKGFLPKYKN-LTAPKKEAFLDFLAVPTYYSMAMLKSNNGPMNTLATDG 278
Query: 149 DGPYKYKIKPSNNNVNISTGVNWALLSTVVSKDFPLAVYSVDKVPLPYELF 199
++ ++ V + T +N + + + PLA+Y+ DKV LP ELF
Sbjct: 279 ANKFELTVQNDGEKVTLKTRINTVKIVDTLIDEQPLAIYATDKVLLPKELF 329
>AT3G46550.1 | chr3:17136612-17137874 REVERSE LENGTH=421
Length = 420
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 80/154 (51%), Gaps = 9/154 (5%)
Query: 52 NVTAVLEKSGKYTTFLRLLHESRVDTQINSQLMDSYNGLTMFAPTDAAFAALKPGT-LNS 110
N+T +L + L LL S V T+ + + G+T+F PTD+AF+ L L S
Sbjct: 207 NLTQILINGHNFNVALSLLVASGVITEFEND--ERGAGITVFVPTDSAFSDLPSNVNLQS 264
Query: 111 LSSQDQIQLMLYCVLPRFYSLAMLTTLGGPVN----TQASGADGPYKYKIKPSNNN-VNI 165
L ++ + ++ + VL +Y+L L ++ PV T+ GA G Y I N + V I
Sbjct: 265 LPAEQKAFVLKFHVLHSYYTLGSLESITNPVQPTLATEEMGA-GSYTLNISRVNGSIVTI 323
Query: 166 STGVNWALLSTVVSKDFPLAVYSVDKVPLPYELF 199
++GV A+++ P++V+ V KV LP ELF
Sbjct: 324 NSGVVLAVVTQTAFDQNPVSVFGVSKVLLPKELF 357
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.317 0.131 0.382
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,053,613
Number of extensions: 110415
Number of successful extensions: 262
Number of sequences better than 1.0e-05: 11
Number of HSP's gapped: 252
Number of HSP's successfully gapped: 11
Length of query: 272
Length of database: 11,106,569
Length adjustment: 97
Effective length of query: 175
Effective length of database: 8,447,217
Effective search space: 1478262975
Effective search space used: 1478262975
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 111 (47.4 bits)