BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0560400 Os05g0560400|Os05g0560400
(349 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G53320.1 | chr1:19891237-19893429 REVERSE LENGTH=380 372 e-103
AT2G47900.3 | chr2:19611196-19612766 REVERSE LENGTH=408 282 2e-76
AT2G18280.1 | chr2:7946754-7948176 FORWARD LENGTH=395 276 2e-74
AT3G06380.1 | chr3:1936384-1938028 FORWARD LENGTH=381 261 5e-70
AT1G43640.1 | chr1:16439619-16441253 REVERSE LENGTH=430 260 6e-70
AT1G47270.1 | chr1:17326828-17328564 FORWARD LENGTH=414 260 8e-70
AT5G18680.1 | chr5:6228358-6230426 REVERSE LENGTH=390 256 1e-68
AT1G76900.1 | chr1:28882741-28884377 FORWARD LENGTH=456 176 2e-44
AT1G25280.1 | chr1:8864961-8866608 FORWARD LENGTH=446 166 2e-41
AT1G16070.2 | chr1:5511899-5513779 REVERSE LENGTH=399 52 5e-07
>AT1G53320.1 | chr1:19891237-19893429 REVERSE LENGTH=380
Length = 379
Score = 372 bits (955), Expect = e-103, Method: Compositional matrix adjust.
Identities = 188/315 (59%), Positives = 222/315 (70%), Gaps = 20/315 (6%)
Query: 47 WPARKDLVSXXXXXXXXXXXXXXXXXPLPESGRITFPSSLKQPGPKDFPIQCFVKRNKKK 106
WP R+D+V+ SG+ITFPS LK PGP+DF QC +KRNKK
Sbjct: 66 WPQRRDVVTCACVSKKWREITHDFARSSLNSGKITFPSCLKLPGPRDFSNQCLIKRNKKT 125
Query: 107 SMFYLYLGLLNGTMDKGKFLMAARRFRRGPHTEYVISLDADDLSQGSNAYVGKLRSDFWG 166
S FYLYL L DKGKFL+AARRFR G +TEY+ISLDADD SQGSNAYVGKLRSDF G
Sbjct: 126 STFYLYLALTPSFTDKGKFLLAARRFRTGAYTEYIISLDADDFSQGSNAYVGKLRSDFLG 185
Query: 167 TNFKIYDNQPPYDDAKTSSTRSSQRFGSTHRFGSRRICPQISAGNFNVGQISYKYNLLKS 226
TNF +YD+QPP++ AK S+ ++S+ RF S++I PQ+ AGNF VG +SYK+NLLKS
Sbjct: 186 TNFTVYDSQPPHNGAKPSNGKASR------RFASKQISPQVPAGNFEVGHVSYKFNLLKS 239
Query: 227 RGPRRMFCTMECPSTQETWENS--------------LKTKSLRCTGTTVLRNKAPRWHEH 272
RGPRRM T+ CPS + ++ +K + + T+L+NKAPRWHEH
Sbjct: 240 RGPRRMVSTLRCPSPSPSSSSAGLSSDQKPCDVTKIMKKPNKDGSSLTILKNKAPRWHEH 299
Query: 273 LQCWCLNFHGRVTVASVKNFQLVATADPSHPDSVGDEETVILQFGKVDSNIFTMDYRQPL 332
LQCWCLNFHGRVTVASVKNFQLVAT D S P GDEETV+LQFGKV + FTMDYRQPL
Sbjct: 300 LQCWCLNFHGRVTVASVKNFQLVATVDQSQPSGKGDEETVLLQFGKVGDDTFTMDYRQPL 359
Query: 333 SAFQAFAICLSSFET 347
SAFQAFAICL+SF T
Sbjct: 360 SAFQAFAICLTSFGT 374
>AT2G47900.3 | chr2:19611196-19612766 REVERSE LENGTH=408
Length = 407
Score = 282 bits (721), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 155/339 (45%), Positives = 205/339 (60%), Gaps = 48/339 (14%)
Query: 47 WPARKDLVSXXXXXXXXXXXXXXXXXPLPESGRITFPSSLKQPGPKDFPIQCFVKRNKKK 106
WP+RK++VS S ++TFP SLKQPGP+ +QC++ RN+
Sbjct: 74 WPSRKNVVSCAGVCRNWREIVKEIVRVPELSSKLTFPISLKQPGPRGSLVQCYIMRNRSN 133
Query: 107 SMFYLYLGL--LNGTMDKGKFLMAARRFRRGPHTEYVISLDADDLSQGSNAYVGKLRSDF 164
+YLYLGL + D GKFL+AA+RFRR T+Y+ISL+ DD+S+GSN Y+GKLRS+F
Sbjct: 134 QTYYLYLGLNQAAASNDDGKFLLAAKRFRRPTCTDYIISLNCDDVSRGSNTYIGKLRSNF 193
Query: 165 WGTNFKIYDNQPPYDDAKTSSTRSSQRFGSTHRFGSRRICPQISAGNFNVGQISYKYNLL 224
GT F +YD QP + + TRSS+ +++ P+I +GN+ V ISY+ N+L
Sbjct: 194 LGTKFTVYDAQPTNPGTQVTRTRSSR------LLSLKQVSPRIPSGNYPVAHISYELNVL 247
Query: 225 KSRGPRRMFCTME------------CPSTQETWENSL--------------KTKSL---- 254
SRGPRRM C M+ P+ E ++L + +SL
Sbjct: 248 GSRGPRRMQCVMDAIPASAVEPGGTAPTQTELVHSNLDSFPSFSFFRSKSIRAESLPSGP 307
Query: 255 ----RCTGTTVLRNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVATAD--PSHPDSVGD 308
+ G VL+NKAPRWHE LQCWCLNF+GRVTVASVKNFQLVA + P+ P +
Sbjct: 308 SSAAQKEGLLVLKNKAPRWHEQLQCWCLNFNGRVTVASVKNFQLVAAPENGPAGP----E 363
Query: 309 EETVILQFGKVDSNIFTMDYRQPLSAFQAFAICLSSFET 347
E VILQFGKV ++FTMDY+ P+SAFQAF ICLSSF+T
Sbjct: 364 HENVILQFGKVGKDVFTMDYQYPISAFQAFTICLSSFDT 402
>AT2G18280.1 | chr2:7946754-7948176 FORWARD LENGTH=395
Length = 394
Score = 276 bits (705), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 151/329 (45%), Positives = 191/329 (58%), Gaps = 38/329 (11%)
Query: 47 WPARKDLVSXXXXXXXXXXXXXXXXXPLPESGRITFPSSLKQPGPKDFPIQCFVKRNKKK 106
WPAR +VS + G++TFP SLKQPGP+D PIQCF+KRN+
Sbjct: 70 WPARAAVVSCASVCKSWRGITMEIVRIPEQCGKLTFPISLKQPGPRDSPIQCFIKRNRAT 129
Query: 107 SMFYLYLGLLNGTMDKGKFLMAARRFRRGPHTEYVISLDADDLSQGSNAYVGKLRSDFWG 166
+ + LY GL+ + K L+AARR RR T+++ISL A + S+ S+ YVGKLRS F G
Sbjct: 130 ATYILYYGLMPSETENDKLLLAARRIRRATCTDFIISLSAKNFSRSSSTYVGKLRSGFLG 189
Query: 167 TNFKIYDNQPPYDDAKTSSTRSSQRFGSTHRFGSRRICPQISAGNFNVGQISYKYNLLKS 226
T F IYDNQ SST +Q R ++ P++ + VG I+Y+ N+L++
Sbjct: 190 TKFTIYDNQ------TASSTAQAQ---PNRRLHPKQAAPKLPTNSSTVGNITYELNVLRT 240
Query: 227 RGPRRMFCTMEC---------PSTQETWENSLKTK-------------------SLRCTG 258
RGPRRM C M+ PS + E + + SLR
Sbjct: 241 RGPRRMHCAMDSIPLSSVIAEPSVVQGIEEEVSSSPSPKGETITTDKEIPDNSPSLR-DQ 299
Query: 259 TTVLRNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVATADPSHPDSVGDEETVILQFGK 318
VL+NK+PRWHE LQCWCLNF GRVTVASVKNFQLVA D S + E VILQFGK
Sbjct: 300 PLVLKNKSPRWHEQLQCWCLNFKGRVTVASVKNFQLVAEIDASLDAPPEEHERVILQFGK 359
Query: 319 VDSNIFTMDYRQPLSAFQAFAICLSSFET 347
+ +IFTMDYR PLSAFQAFAIC+SSF+T
Sbjct: 360 IGKDIFTMDYRYPLSAFQAFAICISSFDT 388
>AT3G06380.1 | chr3:1936384-1938028 FORWARD LENGTH=381
Length = 380
Score = 261 bits (666), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 143/334 (42%), Positives = 195/334 (58%), Gaps = 47/334 (14%)
Query: 47 WPARKDLVSXXXXXXXXXXXXXXXXXPLPE-SGRITFPSSLKQPGPKDFPIQCFVKRNKK 105
WP+R+++V+ +PE S ++TFP SLKQ GP+D +QCF+KRN+
Sbjct: 56 WPSRRNVVACAGVCRSWRILTKEIVA-VPEFSSKLTFPISLKQSGPRDSLVQCFIKRNRN 114
Query: 106 KSMFYLYLGLLNGTMDKGKFLMAARRFRRGPHTEYVISLDADDLSQGSNAYVGKLRSDFW 165
++LYLGL D GKFL+AA + +R T+Y+ISL +DD+S+ SNAY+G++RS+F
Sbjct: 115 TQSYHLYLGLTTSLTDNGKFLLAASKLKRATCTDYIISLRSDDISKRSNAYLGRMRSNFL 174
Query: 166 GTNFKIYDNQPPYDDAKTSSTRSSQRFGSTHRFGSRRICPQISAGNFNVGQISYKYNLLK 225
GT F ++D AK +RSS ++ P++ G++ + ISY+ N+L
Sbjct: 175 GTKFTVFDGSQT-GAAKMQKSRSSNFI---------KVSPRVPQGSYPIAHISYELNVLG 224
Query: 226 SRGPRRMFCTMECPSTQ------------------------ETWENSLKTKSLRCTGT-- 259
SRGPRRM C M+ + L++ S C+ +
Sbjct: 225 SRGPRRMRCIMDTIPMSIVESRGVVASTSISSFSSRSSPVFRSHSKPLRSNSASCSDSGN 284
Query: 260 ------TVLRNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVATADPSHPDSVGDEETVI 313
VL NKAPRWHE L+CWCLNFHGRVTVASVKNFQLVA +D ++ E +I
Sbjct: 285 NLGDPPLVLSNKAPRWHEQLRCWCLNFHGRVTVASVKNFQLVAVSD---CEAGQTSERII 341
Query: 314 LQFGKVDSNIFTMDYRQPLSAFQAFAICLSSFET 347
LQFGKV ++FTMDY P+SAFQAFAICLSSFET
Sbjct: 342 LQFGKVGKDMFTMDYGYPISAFQAFAICLSSFET 375
>AT1G43640.1 | chr1:16439619-16441253 REVERSE LENGTH=430
Length = 429
Score = 260 bits (665), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 144/355 (40%), Positives = 203/355 (57%), Gaps = 61/355 (17%)
Query: 47 WPARKDLVSXXXXXXXXXXXXXXXXXPLPESGRITFPSSLKQPGPKDFPIQCFVKRNKKK 106
WPARK +V+ SG++TFP SLKQPGP+D IQC++KR+K
Sbjct: 77 WPARKQVVACAGVCKTWRLMCKDIVKSPEFSGKLTFPVSLKQPGPRDGIIQCYIKRDKSN 136
Query: 107 SMFYLYLGLLNGTM-DKGKFLMAARRFRRGPHTEYVISLDADDLSQGSNAYVGKLRSDFW 165
++LYL L + + GKFL++A+R RR +TEYVIS+DAD++S+ S+ Y+GKL+S+F
Sbjct: 137 MTYHLYLSLSPAILVESGKFLLSAKRSRRATYTEYVISMDADNISRSSSTYIGKLKSNFL 196
Query: 166 GTNFKIYDNQPPYDDAKTSSTRSSQRFGSTHRFGSRRICPQISAGNFNVGQISYKYNLLK 225
GT F +YD P Y+ ++ S + R F S+++ P++ +G++N+ Q++Y+ NLL
Sbjct: 197 GTKFIVYDTAPAYNSSQILSPPNRSR-----SFNSKKVSPKVPSGSYNIAQVTYELNLLG 251
Query: 226 SRGPRRMFCTME------------CPSTQETWENSLKTKSLRCTGTT------------- 260
+RGPRRM C M PS E + SL +S R G++
Sbjct: 252 TRGPRRMNCIMHSIPSLALEPGGTVPSQPEFLQRSLD-ESFRSIGSSKIVNHSGDFTRPK 310
Query: 261 ---------VLRNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVATA------------- 298
VL+ K PRW + L+CWCLNF GRVTVASVKNFQL++ A
Sbjct: 311 EEEGKVRPLVLKTKPPRWLQPLRCWCLNFKGRVTVASVKNFQLMSAATVQPGSGSDGGAL 370
Query: 299 ------DPSHPDSVGDEETVILQFGKVDSNIFTMDYRQPLSAFQAFAICLSSFET 347
P P+ + + +IL FGKV ++FTMDYR PLSAFQAFAI LS+F+T
Sbjct: 371 ATRPSLSPQQPEQ-SNHDKIILHFGKVGKDMFTMDYRYPLSAFQAFAISLSTFDT 424
>AT1G47270.1 | chr1:17326828-17328564 FORWARD LENGTH=414
Length = 413
Score = 260 bits (664), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 149/334 (44%), Positives = 198/334 (59%), Gaps = 49/334 (14%)
Query: 47 WPARKDLVSXXXXXXXXXXXXXXXXXPLPESGRITFPSSLKQPGPKDFPIQCFVKRNKKK 106
WP R+D+V+ SG ITFP SL+QPGP+D PIQCF+KR +
Sbjct: 91 WPGRRDVVACASVCKSWREMTKEVVKVPELSGLITFPISLRQPGPRDAPIQCFIKRERAT 150
Query: 107 SMFYLYLGL---LNGTMDKGKFLMAARRFRRGPHTEYVISLDADDLSQGSNAYVGKLRSD 163
++ LYLGL L+G DK K L++A+R RR E+V+SL +D S+ S+ Y+GKLRS+
Sbjct: 151 GIYRLYLGLSPALSG--DKSKLLLSAKRVRRATGAEFVVSLSGNDFSRSSSNYIGKLRSN 208
Query: 164 FWGTNFKIYDNQPPYDDAKTSSTRSSQRFGSTHRFGSRRICPQISAGN--FNVGQISYKY 221
F GT F +Y+NQPP + K S ++ P +S+ + +N+ I Y+
Sbjct: 209 FLGTKFTVYENQPPPFNRKLPP--------------SMQVSPWVSSSSSSYNIASILYEL 254
Query: 222 NLLKSRGPRRMFCTMEC-------------PSTQETWENSLKTKSLR--CTGTT------ 260
N+L++RGPRRM C M T+ T + K K L C+G
Sbjct: 255 NVLRTRGPRRMQCIMHSIPISAIQEGGKIQSPTEFTNQGKKKKKPLMDFCSGNLGGESVI 314
Query: 261 ----VLRNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVATADPSHPD-SVGDEET--VI 313
+L+NK+PRWHE LQCWCLNF GRVTVASVKNFQLVA A + + ++ +EE VI
Sbjct: 315 KEPLILKNKSPRWHEQLQCWCLNFKGRVTVASVKNFQLVAAAAEAGKNMNIPEEEQDRVI 374
Query: 314 LQFGKVDSNIFTMDYRQPLSAFQAFAICLSSFET 347
LQFGK+ +IFTMDYR P+SAFQAFAICLSSF+T
Sbjct: 375 LQFGKIGKDIFTMDYRYPISAFQAFAICLSSFDT 408
>AT5G18680.1 | chr5:6228358-6230426 REVERSE LENGTH=390
Length = 389
Score = 256 bits (654), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 147/334 (44%), Positives = 194/334 (58%), Gaps = 44/334 (13%)
Query: 47 WPARKDLVSXXXXXXXXXXXXXXXXXPLPESGRITFPSSLKQPGPKDFPIQCFVKRNKKK 106
WP+R+ +V+ S ++TFP SLKQPGP+D +QCF+KRN+
Sbjct: 62 WPSRRSVVACAGVCRGWRLLMNETVVVPEISSKLTFPISLKQPGPRDSLVQCFIKRNRIT 121
Query: 107 SMFYLYLGLLNGTMDKGKFLMAARRFRRGPHTEYVISLDADDLSQGSNAYVGKLRSDFWG 166
++LYLGL N D GKFL+AA + + T+Y+ISL +DD+S+ S AYVGK+RS+F G
Sbjct: 122 QSYHLYLGLTNSLTDDGKFLLAACKLKHTTCTDYIISLRSDDMSRRSQAYVGKVRSNFLG 181
Query: 167 TNFKIYDNQ--PPYDDAKTSSTRSSQRFGSTHRFGSRRICPQISAGNFNVGQISYKYNLL 224
T F ++D P AK +RS + ++ ++ G++ V I+Y+ N+L
Sbjct: 182 TKFTVFDGNLLPSTGAAKLRKSRS---------YNPAKVSAKVPLGSYPVAHITYELNVL 232
Query: 225 KSRGPRRMFCTMEC--------------PS------TQETWENSLKTKSLRCTGT----- 259
SRGPR+M C M+ PS T+ T S ++K LR + +
Sbjct: 233 GSRGPRKMQCLMDTIPTSTMEPQGVASEPSEFPLLGTRSTLSRS-QSKPLRSSSSHLKET 291
Query: 260 -TVLRNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVATADPSHPDSVG-----DEETVI 313
VL NK PRWHE L+CWCLNFHGRVTVASVKNFQLVA A S G E +I
Sbjct: 292 PLVLSNKTPRWHEQLRCWCLNFHGRVTVASVKNFQLVA-AGASCGSGTGMSPERQSERII 350
Query: 314 LQFGKVDSNIFTMDYRQPLSAFQAFAICLSSFET 347
LQFGKV ++FTMDY P+SAFQAFAICLSSFET
Sbjct: 351 LQFGKVGKDMFTMDYGYPISAFQAFAICLSSFET 384
>AT1G76900.1 | chr1:28882741-28884377 FORWARD LENGTH=456
Length = 455
Score = 176 bits (446), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 91/215 (42%), Positives = 131/215 (60%), Gaps = 14/215 (6%)
Query: 47 WPARKDLVSXXXXXXXXXXXXXXXXXPLPESGRITFPSSLKQPGPKDFPIQCFVKRNKKK 106
WPAR+ +V+ SG+ITFP SLKQPGP+D +QCF+KR+K
Sbjct: 79 WPARRHVVACASVCRSWRDMCKEIVQSPELSGKITFPVSLKQPGPRDATMQCFIKRDKSN 138
Query: 107 SMFYLYLGLLNGTM-DKGKFLMAARRFRRGPHTEYVISLDADDLSQGSNAYVGKLRSDFW 165
++LYL L + + GKFL++A+R RR +TEYVIS+ AD +S+ SN Y+GK+RS+F
Sbjct: 139 LTYHLYLCLSPALLVENGKFLLSAKRIRRTTYTEYVISMHADTISRSSNTYIGKIRSNFL 198
Query: 166 GTNFKIYDNQPPYDDAKTSSTRSSQRFGSTHRFGSRRICPQISAGNFNVGQISYKYNLLK 225
GT F IYD QP Y+ ++ R+ Q G + RF S+R+ P++ +G++ + Q+SY+ N+L
Sbjct: 199 GTKFIIYDTQPAYN---SNIARAVQPVGLSRRFYSKRVSPKVPSGSYKIAQVSYELNVLG 255
Query: 226 SRGPRRMFCTMECPSTQETWENSLKTKSLRCTGTT 260
+RGPRRM C M NS+ SL GT
Sbjct: 256 TRGPRRMHCAM----------NSIPASSLAEGGTV 280
Score = 121 bits (303), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 64/121 (52%), Positives = 74/121 (61%), Gaps = 16/121 (13%)
Query: 243 ETWENSLKTKSLRCTGTTVLRNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVAT----- 297
E E L+ R + VL+NK PRWHE LQCWCLNF GRVTVASVKNFQL+A
Sbjct: 330 EDQEVVLEEGKERNSPPLVLKNKPPRWHEQLQCWCLNFRGRVTVASVKNFQLIAANQPQP 389
Query: 298 -----------ADPSHPDSVGDEETVILQFGKVDSNIFTMDYRQPLSAFQAFAICLSSFE 346
P + +ILQFGKV ++FTMD+R PLSAFQAFAICLSSF+
Sbjct: 390 QPQPQPQPQPLTQPQPSGQTDGPDKIILQFGKVGKDMFTMDFRYPLSAFQAFAICLSSFD 449
Query: 347 T 347
T
Sbjct: 450 T 450
>AT1G25280.1 | chr1:8864961-8866608 FORWARD LENGTH=446
Length = 445
Score = 166 bits (420), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 89/191 (46%), Positives = 124/191 (64%), Gaps = 4/191 (2%)
Query: 47 WPARKDLVSXXXXXXXXXXXXXXXXXPLPESGRITFPSSLKQPGPKDFPIQCFVKRNKKK 106
WPARK +V+ G++TFP SLKQPGP+D IQCF+KR+K K
Sbjct: 81 WPARKHVVACASVCRSWRAMCQEIVLGPEICGKLTFPVSLKQPGPRDAMIQCFIKRDKSK 140
Query: 107 SMFYLYLGLLNGTM-DKGKFLMAARRFRRGPHTEYVISLDADDLSQGSNAYVGKLRSDFW 165
F+L+L L + + GKFL++A+R RR TEY+IS+DAD++S+ SN+Y+GKLRS+F
Sbjct: 141 LTFHLFLCLSPALLVENGKFLLSAKRTRRTTRTEYIISMDADNISRSSNSYLGKLRSNFL 200
Query: 166 GTNFKIYDNQPPYDDAKTSSTRSSQRFGSTHRFGSRRICPQISAGNFNVGQISYKYNLLK 225
GT F +YD QPP TSS+ S RF SRR+ P++ +G++N+ QI+Y+ N+L
Sbjct: 201 GTKFLVYDTQPP---PNTSSSALITDRTSRSRFHSRRVSPKVPSGSYNIAQITYELNVLG 257
Query: 226 SRGPRRMFCTM 236
+RGPRRM C M
Sbjct: 258 TRGPRRMHCIM 268
Score = 131 bits (330), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 64/99 (64%), Positives = 72/99 (72%), Gaps = 13/99 (13%)
Query: 261 VLRNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVATADPSHPDSVG------------D 308
+L+NK PRWHE LQCWCLNF GRVTVASVKNFQLVA P P G +
Sbjct: 343 ILKNKQPRWHEQLQCWCLNFRGRVTVASVKNFQLVAARQP-QPQGTGAAAAPTSAPAHPE 401
Query: 309 EETVILQFGKVDSNIFTMDYRQPLSAFQAFAICLSSFET 347
++ VILQFGKV ++FTMDYR PLSAFQAFAICLSSF+T
Sbjct: 402 QDKVILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDT 440
>AT1G16070.2 | chr1:5511899-5513779 REVERSE LENGTH=399
Length = 398
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 19/89 (21%)
Query: 264 NKAPRWHEHLQCWCLNFH--GRVTV---ASVKNFQLVATADPSHPDSVGDEETVILQFGK 318
NK + HE L+F GR + +SVKNFQL T + ILQ G+
Sbjct: 318 NKISKQHE------LDFRDRGRTGLRIQSSVKNFQLTLTQETPRQ--------TILQMGR 363
Query: 319 VDSNIFTMDYRQPLSAFQAFAICLSSFET 347
VD + +D+R P S +QAF ICL+S ++
Sbjct: 364 VDKARYVIDFRYPFSGYQAFCICLASIDS 392
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.135 0.424
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,506,851
Number of extensions: 270658
Number of successful extensions: 551
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 525
Number of HSP's successfully gapped: 13
Length of query: 349
Length of database: 11,106,569
Length adjustment: 99
Effective length of query: 250
Effective length of database: 8,392,385
Effective search space: 2098096250
Effective search space used: 2098096250
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 112 (47.8 bits)