BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0556400 Os05g0556400|AK058980
(369 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G61750.1 | chr3:22857897-22859254 REVERSE LENGTH=399 308 4e-84
AT3G07570.1 | chr3:2418205-2420206 REVERSE LENGTH=370 225 4e-59
AT3G25290.1 | chr3:9208955-9210353 FORWARD LENGTH=394 112 2e-25
AT5G47530.1 | chr5:19281471-19282870 FORWARD LENGTH=396 110 1e-24
AT5G35735.1 | chr5:13900913-13902934 REVERSE LENGTH=405 106 2e-23
AT2G04850.1 | chr2:1704298-1705608 FORWARD LENGTH=405 104 6e-23
AT3G59070.1 | chr3:21832364-21834514 REVERSE LENGTH=467 104 7e-23
AT4G12980.1 | chr4:7589670-7591074 REVERSE LENGTH=395 103 1e-22
AT4G17280.1 | chr4:9678887-9680277 REVERSE LENGTH=403 103 1e-22
AT2G30890.1 | chr2:13147774-13149663 FORWARD LENGTH=258 52 5e-07
>AT3G61750.1 | chr3:22857897-22859254 REVERSE LENGTH=399
Length = 398
Score = 308 bits (788), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 152/321 (47%), Positives = 208/321 (64%), Gaps = 6/321 (1%)
Query: 41 LNCQPVWNNFVLRYHQDKNNVLRVVLSTMYSTGWVGMGFSRDGLMVGSSAMVGWIGRKGL 100
+ C P+WN FVLRY ++++NV+ +++S +Y+TGWVG+GFS++G MVGSSAM+GWI +KG
Sbjct: 57 MPCTPLWNTFVLRYSENRDNVMTIIVSALYTTGWVGIGFSKEGRMVGSSAMIGWISKKGH 116
Query: 101 PHVKQFALRGKTSGKVVVNRGFLVSNSNNHDHTVVVQQARIYLAFQLQFSYRLTHQHIIL 160
+KQ+ L+G +VV ++G L V + A IYLAFQ++F+ R+ + +IL
Sbjct: 117 AKIKQYYLQGTERDQVVPDQGEL--QLQKVPPVVALHGAMIYLAFQVKFAVRVPRRAVIL 174
Query: 161 AFGSSIPVN-NKLTKHQDKTSFTFDFTTGKAFVD-GSFPYGLRRAHGALNLFAWGVLMPI 218
AF ++ P +LTKH DKT+ DF+ + + HG + + WG L+P+
Sbjct: 175 AFSTAYPSKLGRLTKHDDKTTVIVDFSKASGATSIKTTTSTEKTKHGVMAILGWGFLLPV 234
Query: 219 GAILARYFRRMDPLWFYLHVGVQFVAFIIGLAGVVAGVALYNKIQADIPAHRXXXXXXXX 278
GAILARY R DPLW+YLH+G QF FI GLA V+ G+ LYN+IQ DIPAHR
Sbjct: 235 GAILARYLRHKDPLWYYLHIGFQFTGFIFGLAAVILGIQLYNRIQPDIPAHRGIGIFLLV 294
Query: 279 XXXXXXXAFFLRPNTDSKYRKYWNWYHHWSGRLVLFFAAVNIVLGIHVG-GGDNSWKIGY 337
AFF RP ++K R+YWNWYHHW GR+ LFF AVNIVLGI + G + WKIGY
Sbjct: 295 LSTLQVLAFFARPQKETKMRRYWNWYHHWIGRISLFFGAVNIVLGIRMADNGGDGWKIGY 354
Query: 338 GFNLAIILLAVIGLEFMLRTR 358
GF L++ LLA + LE + R R
Sbjct: 355 GFVLSVTLLAFVVLE-IFRIR 374
>AT3G07570.1 | chr3:2418205-2420206 REVERSE LENGTH=370
Length = 369
Score = 225 bits (573), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 131/341 (38%), Positives = 195/341 (57%), Gaps = 18/341 (5%)
Query: 24 ESCNTELP-GVLVGNYSGLNCQPVWN--NFVLRYHQDKNNVLRVVLSTMYSTGWVGMGFS 80
+SCN+ LP L N S L C W NF+LRY + N +LS S+ ++G+GFS
Sbjct: 28 DSCNSTLPLNDLTFNTSLLQCTEAWTPQNFILRYARTAENTWSFILSAPDSSAFIGIGFS 87
Query: 81 RDGLMVGSSAMVGWIGRKGLP-HVKQFALRGKTSGKVVVNRGFL-VSNSNNHDHTVVVQQ 138
+G M+GSSA+VGWI G VK + L GK+ G+V ++G L + N + +V
Sbjct: 88 TNGQMIGSSAIVGWIPSDGGSGTVKPYLLGGKSPGEVNPDQGDLTIVNGSLKIESV---S 144
Query: 139 ARIYLAFQLQFSYRLTHQHIILAFGS-----SIPVNNKLTKHQDKTSFTFDFTTGKAFVD 193
+R+Y+ FQL + L Q ++ A G S P + +L +H+ T+ T ++ TG V
Sbjct: 145 SRLYMRFQL--TATLPRQSLLYAVGPAGFFPSSP-DFRLREHRFVTTTTINYNTGSQSVV 201
Query: 194 GSFPYG-LRRAHGALNLFAWGVLMPIGAILARYFRRMDPLWFYLHVGVQFVAFIIGLAGV 252
P+ L++ HG +N+F WG+L+ +GAI+AR+ ++ DP WFY H+ +Q F++GL GV
Sbjct: 202 KVSPHSKLKKTHGLMNMFGWGILIIVGAIVARHMKQWDPTWFYAHIALQTTGFLLGLTGV 261
Query: 253 VAGVALYNKIQAD-IPAHRXXXXXXXXXXXXXXXAFFLRPNTDSKYRKYWNWYHHWSGRL 311
+ G+ L N+++A+ + H+ A RP+ SKYRKYWNWYHH GRL
Sbjct: 262 ICGLVLENRLKANNVSKHKGLGITILVMGVLQMLALLARPDKQSKYRKYWNWYHHNIGRL 321
Query: 312 VLFFAAVNIVLGIHVGGGDNSWKIGYGFNLAIILLAVIGLE 352
++ A NI GIH+ SW GYGF +A++ L IGLE
Sbjct: 322 LIILAISNIFYGIHLAKAGTSWNGGYGFAVAVLALTAIGLE 362
>AT3G25290.1 | chr3:9208955-9210353 FORWARD LENGTH=394
Length = 393
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 91/177 (51%), Gaps = 9/177 (5%)
Query: 201 RRAHGALNLFAWGVLMPIGAILARYFR---RMDPLWFYLHVGVQFVAFIIGLAGVVAGVA 257
R HG LN +WG+L PIGAI+ARY R DP WFYLHV QF A++IG+AG G+
Sbjct: 217 RNIHGILNAVSWGILFPIGAIIARYMRVFDSADPAWFYLHVSCQFSAYVIGVAGWATGLK 276
Query: 258 LYNKIQA-DIPAHRXXXXXXXXXXXXXXXAFFLRPNTDSKYRKYWNWYHHWSGRLVLFFA 316
L N+ + AHR A LRP D KYR YWN YHH G +L
Sbjct: 277 LGNESEGIRFSAHRNIGIALFTLATIQMFAMLLRPKKDHKYRFYWNIYHHGVGYAILTLG 336
Query: 317 AVNIVLGIHVGGGDNSWKIGYGFNLAI-----ILLAVIGLEFMLRTRWSKESEPTPT 368
+N+ G+++ +++K Y +A+ +LL I +L+ + + +P T
Sbjct: 337 IINVFKGLNILKPQDTYKTAYIAVIAVLGGIALLLEAITWVVVLKRKSNNSMKPLRT 393
>AT5G47530.1 | chr5:19281471-19282870 FORWARD LENGTH=396
Length = 395
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 81/156 (51%), Gaps = 4/156 (2%)
Query: 201 RRAHGALNLFAWGVLMPIGAILARYFR---RMDPLWFYLHVGVQFVAFIIGLAGVVAGVA 257
R HG LN +WG++MPIGAI+ARY + DP WFYLHV Q A+IIG+AG G+
Sbjct: 208 RNIHGILNGVSWGIMMPIGAIIARYLKVSKSADPAWFYLHVFCQSSAYIIGVAGWATGLK 267
Query: 258 LYNKIQA-DIPAHRXXXXXXXXXXXXXXXAFFLRPNTDSKYRKYWNWYHHWSGRLVLFFA 316
L N+ HR A FLRP + KYR YWN YHH G V+ A
Sbjct: 268 LGNESAGIQFTFHRAVGIALFCLATIQVFAMFLRPKPEHKYRVYWNIYHHTVGYSVIILA 327
Query: 317 AVNIVLGIHVGGGDNSWKIGYGFNLAIILLAVIGLE 352
VN+ G+ + + W+ Y + ++ + + LE
Sbjct: 328 VVNVFKGLDILSPEKQWRNAYTAIIVVLGIVAVVLE 363
>AT5G35735.1 | chr5:13900913-13902934 REVERSE LENGTH=405
Length = 404
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 76/154 (49%), Gaps = 2/154 (1%)
Query: 201 RRAHGALNLFAWGVLMPIGAILARYFRRM-DPLWFYLHVGVQFVAFIIGLAGVVAGVALY 259
R HG LN +WGVLMP+GA++ARY + DP WFYLH+ Q ++IG+AG G+ L
Sbjct: 208 RNTHGVLNAVSWGVLMPMGAMMARYMKVFADPTWFYLHIAFQVSGYVIGVAGWATGIKLG 267
Query: 260 NKIQ-ADIPAHRXXXXXXXXXXXXXXXAFFLRPNTDSKYRKYWNWYHHWSGRLVLFFAAV 318
N HR A +RP D KYR YWN YHH G + + V
Sbjct: 268 NDSPGTSYSTHRNLGIALFTFATLQVFALLVRPKPDHKYRTYWNVYHHTVGYTTIILSIV 327
Query: 319 NIVLGIHVGGGDNSWKIGYGFNLAIILLAVIGLE 352
NI G + ++ W+ Y L + V+ LE
Sbjct: 328 NIFKGFDILDPEDKWRWAYIGILIFLGACVLILE 361
>AT2G04850.1 | chr2:1704298-1705608 FORWARD LENGTH=405
Length = 404
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 99/202 (49%), Gaps = 10/202 (4%)
Query: 173 TKHQDKTSF-TFDFTTGKAFVD-GSFPYGLRRAHGALNLFAWGVLMPIGAILARYFRRMD 230
T D +SF TFD T+G A V+ S L+ HG +N +WG L+P GA+ ARY R+M
Sbjct: 186 TTSTDLSSFSTFDVTSGFATVNQNSGSRALKVTHGVVNAISWGFLLPAGAVTARYLRQMQ 245
Query: 231 ---PLWFYLHVGVQFVAFIIGLAGVVAGVAL-YNKIQADIPAHRXXXXXXXXXXXXXXXA 286
P WFY+H +Q F++G G G+ L +N HR A
Sbjct: 246 SIGPTWFYIHAAIQLTGFLLGTIGFSIGIVLGHNSPGVTYGLHRSLGIATFTAAALQTLA 305
Query: 287 FFLRPNTDSKYRKYWNWYHHWSGRLVLFFAAVNIVLGIHVGGGDNSW-KIGYGFNLAIIL 345
RP T +K+R+YW YHH+ G + VN+ G V S+ K+GY L+ ++
Sbjct: 306 LLFRPKTTNKFRRYWKSYHHFVGYACVVMGVVNVFQGFEVLREGRSYAKLGYCLCLSTLV 365
Query: 346 LAVIGLE---FMLRTRWSKESE 364
+ +E +++ R +KE +
Sbjct: 366 GVCVAMEVNSWVVFCRKAKEEK 387
>AT3G59070.1 | chr3:21832364-21834514 REVERSE LENGTH=467
Length = 466
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 149/349 (42%), Gaps = 55/349 (15%)
Query: 46 VWNNFVLRYHQDKNNVLRVVL--STMYSTGWVGMGFSRDGL-MVGSSAMVGWIGRKGLPH 102
V N+++ + + VL + S + S+ W+ + MVG+ A+V +
Sbjct: 56 VLNSYLHFNYAQETGVLEIAYHHSNLESSSWISWAINPTSKGMVGAQALVAY-------- 107
Query: 103 VKQFALRGKTSGKVVVNRGFLVSNSNNHDHTVVVQQARIYLAFQLQFSYRLTHQHIILAF 162
R TSG V R + S+ + ++ ++Q++ + L Q S ++ +++
Sbjct: 108 ------RNSTSG---VMRAY---TSSINSYSPMLQESPLSLRVT-QVSAEYSNGEMMIFA 154
Query: 163 GSSIPVNNKLTKH--QD-------------------KTSFTFDFTTGKAFVDGSFPYGL- 200
+P N + H QD K+ + D +G+ S +
Sbjct: 155 TLVLPPNTTVVNHLWQDGPLKEGDRLGMHAMSGDNLKSMASLDLLSGQVTTTKSVNRNML 214
Query: 201 --RRAHGALNLFAWGVLMPIGAILARYFRR---MDPLWFYLHVGVQFVAFIIGLAGVVAG 255
++ H +N +WG+LMPIG + ARY + +DP WFY+HV Q + GL G + G
Sbjct: 215 LVKQIHAIVNALSWGILMPIGVMAARYMKNYEVLDPTWFYIHVVCQTTGYFSGLIGGL-G 273
Query: 256 VALYNKIQADIPA--HRXXXXXXXXXXXXXXXAFFLRPNTDSKYRKYWNWYHHWSGRLVL 313
A+Y + H + RPN D KYRKYWNWYHH G +V+
Sbjct: 274 TAIYMARHTGMRTTLHTVIGLLLFALGFLQILSLKARPNKDHKYRKYWNWYHHTMGYIVI 333
Query: 314 FFAAVNIVLGIHVGGGDNSWKIGYGFNLAIILLAVIGLEFM-LRTRWSK 361
+ NI G+ + + WKI Y + I + +E + + RW++
Sbjct: 334 VLSIYNIYKGLSILQPGSIWKIAYTTIICCIAAFAVVMEILQFKKRWAR 382
>AT4G12980.1 | chr4:7589670-7591074 REVERSE LENGTH=395
Length = 394
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 90/177 (50%), Gaps = 15/177 (8%)
Query: 201 RRAHGALNLFAWGVLMPIGAILARY---FRRMDPLWFYLHVGVQFVAFIIGLAGVVAGVA 257
R HG LN +WG+L PIGA++ARY F DP WFYLHV QF A++IG+AG G+
Sbjct: 218 RNIHGILNAVSWGLLFPIGAMIARYMRIFESADPAWFYLHVSCQFSAYVIGVAGWATGLK 277
Query: 258 LYNKIQA-DIPAHRXXXXXXXXXXXXXXXAFFLRPNTDSKYRKYWNWYHHWSGRLVLFFA 316
L ++ + HR A LRP D K+R WN YHH G +L
Sbjct: 278 LGSESKGIQYNTHRNIGICLFSIATLQMFAMLLRPRKDHKFRFVWNIYHHGVGYSILILG 337
Query: 317 AVNIVLGIHVGGGDNSWKIGYGFNLAII--------LLAVIGLEFMLRTRWSKESEP 365
+N+ G+ + +++K Y +A+I LL V+ +L+ + +K ++P
Sbjct: 338 IINVFKGLSILNPKHTYKTAY---IAVIGTLGGITLLLEVVTWVIVLKRKSAKSTKP 391
>AT4G17280.1 | chr4:9678887-9680277 REVERSE LENGTH=403
Length = 402
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 81/159 (50%), Gaps = 16/159 (10%)
Query: 201 RRAHGALNLFAWGVLMPIGAILARYFR---RMDPLWFYLHVGVQFVAFIIGLAGVVAGVA 257
R HG LN +WG++MP+GAI+ARY R DP WFY+HV Q A+IIG+AG G+
Sbjct: 216 RNIHGILNGVSWGIMMPLGAIIARYLRVAKSADPAWFYIHVFCQASAYIIGVAGWATGL- 274
Query: 258 LYNKIQADIP-----AHRXXXXXXXXXXXXXXXAFFLRPNTDSKYRKYWNWYHHWSGRLV 312
K+ D P HR A FLRP + K+R YWN YHH G +
Sbjct: 275 ---KLGGDSPGIQYSTHRAIGIALFSLATVQVFAMFLRPKPEHKHRLYWNIYHHTIGYTI 331
Query: 313 LFFAAVNIVLGIHVGGGDNSWKIGY-GFNLAIILLAVIG 350
+ VN+ G+ + WK Y G I++LA++
Sbjct: 332 IILGVVNVFKGLGILSPKKQWKNAYIGI---IVVLAIVA 367
>AT2G30890.1 | chr2:13147774-13149663 FORWARD LENGTH=258
Length = 257
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 66/165 (40%), Gaps = 8/165 (4%)
Query: 202 RAHGALNLFAWGVLMPIGAILARYFRRMD-PL-----WFYLHVGVQFVAFIIGLAGVVAG 255
+ HG + A GVLMPIG I R D P+ F+LHV Q VA I+ G V
Sbjct: 54 KVHGFMLWAAMGVLMPIGIISIRLMSIKDQPIITLRRLFFLHVTSQMVAVILVTIGAVMS 113
Query: 256 VALYNKIQADIPAHRXXXXXXXXXXXXXXXAFFLRPNTDSKYRKYWNWYHHWSGRLVLFF 315
V +N ++ H+ FLRP + K R+ W H G +
Sbjct: 114 VINFNNSFSN--HHQQLGIGLYVIVWFQALLGFLRPPREEKARRKWFVGHWILGTSIAIL 171
Query: 316 AAVNIVLGIHVGGGDNSWKIGYGFNLAIILLAVIGLEFMLRTRWS 360
+NI G+H S L L+ I L ++ + +WS
Sbjct: 172 GIINIYTGLHAYAKKTSKSANLWTILFTAQLSCIALVYLFQDKWS 216
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.326 0.141 0.455
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,481,043
Number of extensions: 302880
Number of successful extensions: 810
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 789
Number of HSP's successfully gapped: 10
Length of query: 369
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 269
Effective length of database: 8,364,969
Effective search space: 2250176661
Effective search space used: 2250176661
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 112 (47.8 bits)