BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0543100 Os05g0543100|AK065138
(430 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G60780.1 | chr1:22369289-22371885 REVERSE LENGTH=429 791 0.0
AT1G10730.1 | chr1:3565463-3567779 FORWARD LENGTH=429 750 0.0
AT5G46630.2 | chr5:18920580-18923060 FORWARD LENGTH=442 331 6e-91
AT4G24550.2 | chr4:12675873-12678903 FORWARD LENGTH=452 261 4e-70
AT1G56590.1 | chr1:21202250-21204697 REVERSE LENGTH=416 166 2e-41
>AT1G60780.1 | chr1:22369289-22371885 REVERSE LENGTH=429
Length = 428
Score = 791 bits (2043), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/428 (85%), Positives = 405/428 (94%), Gaps = 1/428 (0%)
Query: 3 AGAVSALFLLDIKGRVLVWRDYRGDVSALQAERFFTKLLDKESDAEVLSPVVHDDAGVSY 62
AGA SALFLLDIKGRVLVWRDYRGDVSA QAERFFTKL++KE D++ PV +D+ GV+Y
Sbjct: 2 AGAASALFLLDIKGRVLVWRDYRGDVSAAQAERFFTKLIEKEGDSQSNDPVAYDN-GVTY 60
Query: 63 MFIQHNNVFLLTASRQNCNAASILLFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEM 122
MF+QH+NV+L+ ASRQNCNAAS+L FLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEM
Sbjct: 61 MFVQHSNVYLMIASRQNCNAASLLFFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEM 120
Query: 123 MDFGYPQYTEAMILSEFIKTDAYRMEVTQRPPMAVTNAVSWRSEGIRYKKNEVFLDVVES 182
MDFGYPQYTEA ILSEFIKTDAYRMEVTQRPPMAVTNAVSWRSEGI+YKKNEVFLDV+E+
Sbjct: 121 MDFGYPQYTEARILSEFIKTDAYRMEVTQRPPMAVTNAVSWRSEGIQYKKNEVFLDVIEN 180
Query: 183 VNILVNSNGQIVRSDVIGELKMRTFLSGMPECKLGLNDRVLLEAQGRTTKGKAIDLDDIK 242
VNILVNSNGQIVRSDV+G LKMRT+L+GMPECKLGLNDRVLLEAQGR TKGKAIDL+DIK
Sbjct: 181 VNILVNSNGQIVRSDVVGALKMRTYLTGMPECKLGLNDRVLLEAQGRATKGKAIDLEDIK 240
Query: 243 FHQCVRLARFENDRTISFIPPDGSFDLMTYRLSTQVKPLIWVEAQVEKHSRSRIQITVKT 302
FHQCVRLARFENDRTISFIPPDG+FDLMTYRLSTQVKPLIWVEAQ+E HSRSR+++ +K
Sbjct: 241 FHQCVRLARFENDRTISFIPPDGAFDLMTYRLSTQVKPLIWVEAQIESHSRSRVEMLIKA 300
Query: 303 RSQFKERSTATNVEIEVPVPEDSTNPNIRTSMGSAAYAPERDAMVWKIKSFPGGKEYMCR 362
RSQFKERSTATNVEIE+PVP D++NP +RTS+GSA+YAPE+DA+VWKIKSFPG KEYM R
Sbjct: 301 RSQFKERSTATNVEIELPVPTDASNPTVRTSLGSASYAPEKDALVWKIKSFPGNKEYMLR 360
Query: 363 AEFSLPSITSEDGMPEKKAPIRVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITMA 422
AEF LPSIT+E+ PE+KAPIRVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITMA
Sbjct: 361 AEFHLPSITAEEATPERKAPIRVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITMA 420
Query: 423 GEYELRLI 430
GEYELRL+
Sbjct: 421 GEYELRLV 428
>AT1G10730.1 | chr1:3565463-3567779 FORWARD LENGTH=429
Length = 428
Score = 750 bits (1936), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/428 (81%), Positives = 395/428 (92%), Gaps = 1/428 (0%)
Query: 3 AGAVSALFLLDIKGRVLVWRDYRGDVSALQAERFFTKLLDKESDAEVLSPVVHDDAGVSY 62
AGA SALFLLDIKGRVLVWRDYRGDV+A QAERFFTKL++ E D++ PV +D+ GV+Y
Sbjct: 2 AGAASALFLLDIKGRVLVWRDYRGDVTAAQAERFFTKLIETEGDSQSNDPVAYDN-GVTY 60
Query: 63 MFIQHNNVFLLTASRQNCNAASILLFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEM 122
MF+QH+N++L+ ASRQNCNAAS+L FLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEM
Sbjct: 61 MFVQHSNIYLMIASRQNCNAASLLFFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEM 120
Query: 123 MDFGYPQYTEAMILSEFIKTDAYRMEVTQRPPMAVTNAVSWRSEGIRYKKNEVFLDVVES 182
MDFGYPQ+TEA ILSEFIKTDAYRMEVTQRPPMAVTN+VSWRSEG+++KKNEVFLDV+ES
Sbjct: 121 MDFGYPQFTEARILSEFIKTDAYRMEVTQRPPMAVTNSVSWRSEGLKFKKNEVFLDVIES 180
Query: 183 VNILVNSNGQIVRSDVIGELKMRTFLSGMPECKLGLNDRVLLEAQGRTTKGKAIDLDDIK 242
VNILVNSNGQIVRSDV+G LKMRT+LSGMPECKLGLNDR+LLEAQGR KGKAIDL+DIK
Sbjct: 181 VNILVNSNGQIVRSDVVGALKMRTYLSGMPECKLGLNDRILLEAQGRAIKGKAIDLEDIK 240
Query: 243 FHQCVRLARFENDRTISFIPPDGSFDLMTYRLSTQVKPLIWVEAQVEKHSRSRIQITVKT 302
FHQCVRLARFENDRTISFIPPDGSFDLMTYRLSTQVKPLIWVEA +E+HSRSR+++ VK
Sbjct: 241 FHQCVRLARFENDRTISFIPPDGSFDLMTYRLSTQVKPLIWVEAHIERHSRSRVEMLVKA 300
Query: 303 RSQFKERSTATNVEIEVPVPEDSTNPNIRTSMGSAAYAPERDAMVWKIKSFPGGKEYMCR 362
RSQFK+RS AT+VEIE+PVP D+ NP++RTS+GSAAYAPE+DA+VWKI+ F G KE+ +
Sbjct: 301 RSQFKDRSYATSVEIELPVPTDAYNPDVRTSLGSAAYAPEKDALVWKIQYFYGNKEHTLK 360
Query: 363 AEFSLPSITSEDGMPEKKAPIRVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITMA 422
A+F LPSI +E+ PE+KAPIRVKFEIP F VSGIQVRYLKIIEKSGYQA PWVRYITMA
Sbjct: 361 ADFHLPSIAAEEATPERKAPIRVKFEIPKFIVSGIQVRYLKIIEKSGYQAHPWVRYITMA 420
Query: 423 GEYELRLI 430
GEYELRL+
Sbjct: 421 GEYELRLM 428
>AT5G46630.2 | chr5:18920580-18923060 FORWARD LENGTH=442
Length = 441
Score = 331 bits (848), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 169/418 (40%), Positives = 257/418 (61%), Gaps = 26/418 (6%)
Query: 5 AVSALFLLDIKGRVLVWRDYRGDVSALQAERFFTKLLDKESDAEVLSPVVHDDAGVSYMF 64
A SA++ L+++G VL+ R YR DV + F T ++ + E+ + V G S+++
Sbjct: 4 AASAIYFLNLRGDVLINRTYRDDVGGNMVDAFRTHIMQTK---ELGNCPVRQIGGCSFVY 60
Query: 65 IQHNNVFLLTASRQNCNAASILLFLHRVVDVFKHYFE-ELEEESLRDNFVVVYELLDEMM 123
++ +NV+++ N N A F+ V +FK YF +E+++R+NFV++YELLDE+M
Sbjct: 61 MRISNVYIVIVVSSNANVACGFKFVVEAVALFKSYFGGAFDEDAIRNNFVLIYELLDEIM 120
Query: 124 DFGYPQYTEAMILSEFIKTDAYRMEVTQRP--------PMAVTNAVSWRSEGIRYKKNEV 175
DFGYPQ IL +I + R + +P + VT AV WR EG+ YKKNEV
Sbjct: 121 DFGYPQNLSPEILKLYITQEGVRSPFSSKPKDKPVPNATLQVTGAVGWRREGLAYKKNEV 180
Query: 176 FLDVVESVNILVNSNGQIVRSDVIGELKMRTFLSGMPECKLGLNDRVLLEAQGR-----T 230
FLD+VESVN+L++S G ++R DV G++ M+ FLSGMP+ KLGLND++ LE +
Sbjct: 181 FLDIVESVNLLMSSKGNVLRCDVTGKVLMKCFLSGMPDLKLGLNDKIGLEKESEMKSRPA 240
Query: 231 TKGKAIDLDDIKFHQCVRLARFENDRTISFIPPDGSFDLMTYRLSTQVKPLIWVEAQVEK 290
GK I+LDD+ FHQCV L RF +++T+SF+PPDG F+LM YR++ V V +++
Sbjct: 241 KSGKTIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEGVNLPFRVLPTIKE 300
Query: 291 HSRSRIQITVKTRSQFKERSTATNVEIEVPVPEDSTNPNIRTSMGSAAYAPERDAMVWKI 350
R+R+++ VK +S F + A V +++PVP+ + N + + G A Y P D +VWKI
Sbjct: 301 LGRTRMEVNVKVKSVFGAKMFALGVVVKIPVPKQTAKTNFQVTTGRAKYNPSIDCLVWKI 360
Query: 351 KSFPGGKEYMCRAEFSLPSITSEDGMPEKKA----PIRVKFEIPYFTVSGIQVRYLKI 404
+ FPG E AE L S M EKK+ PI+++F++P FT SG++VR+LK+
Sbjct: 361 RKFPGQTESTLSAEIELIST-----MGEKKSWTRPPIQMEFQVPMFTASGLRVRFLKV 413
>AT4G24550.2 | chr4:12675873-12678903 FORWARD LENGTH=452
Length = 451
Score = 261 bits (668), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 141/451 (31%), Positives = 243/451 (53%), Gaps = 29/451 (6%)
Query: 6 VSALFLLDIKGRVLVWRDYRGDVSALQAERFFTKLLDKESDAEVLSPVVHDDAGVSYMFI 65
+S F+L +G +V+RDYR +V E FF K+ + D +P + + GV+Y +
Sbjct: 3 ISQFFVLSQRGDNIVFRDYRAEVPKGSTETFFRKVKFWKEDGNAEAPPIFNVDGVNYFHV 62
Query: 66 QHNNVFLLTASRQNCNAASILLFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEMMDF 125
+ ++ + +R N + + +L L R+ V K Y L E+S R NFV+VYELLDE++DF
Sbjct: 63 KVVGLYFVATTRVNVSPSLVLELLQRIARVIKDYLGVLNEDSFRKNFVLVYELLDEVIDF 122
Query: 126 GYPQYTEAMILSEFIKTDA----------------YRMEVTQRPPMAVTNAVSWRSEGIR 169
GY Q T +L +I + + + P AVT +V G R
Sbjct: 123 GYVQTTSTEVLKSYIFNEPIVVSPARLQPIDPAAIFTQGAKRMPGTAVTKSVVANDPGGR 182
Query: 170 YKKNEVFLDVVESVNILVNSNGQIVRSDVIGELKMRTFLSGMPECKLGLNDRVLLEAQG- 228
++ E+F+D++E +++ +S+G I+ S++ G ++M+++LSG PE +L LN+ + + G
Sbjct: 183 -RREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLSGNPEIRLALNEDLNIGRGGR 241
Query: 229 -----RTTKGKAIDLDDIKFHQCVRLARFENDRTISFIPPDGSFDLMTYRLSTQVKPLIW 283
R++ G + LDD FH+ VRL F++DRT+S +PPDG F +M YR++ + KP
Sbjct: 242 SVYDYRSSSGSGVILDDCNFHESVRLDSFDSDRTLSLVPPDGEFPVMNYRMTQEFKPPFH 301
Query: 284 VEAQVEKHSRSRIQITVKTRSQFKERSTATNVEIEVPVPEDSTNPNIRTSMGSAA----Y 339
V +E+ R + ++ +K R++F A + +++P+P ++ + G+A +
Sbjct: 302 VNTLIEEAGRLKAEVIIKIRAEFPSDIIANTITVQMPLPNYTSRASFELEPGAAGQRTDF 361
Query: 340 APERDAMVWKIKSFPGGKEYMCRAEFSLPSITSEDGMPEKKAPIRVKFEIPYFTVSGIQV 399
+ W +K GG E+ RA+ + S + ++ P+ + F IP + VS +QV
Sbjct: 362 KESNKMLEWNLKKIVGGGEHTLRAKLTF-SQEFHGNITKEAGPVSMTFTIPMYNVSKLQV 420
Query: 400 RYLKIIEK-SGYQALPWVRYITMAGEYELRL 429
+YL+I +K S Y WVRY+T A Y R+
Sbjct: 421 KYLQIAKKSSSYNPYRWVRYVTQANSYVARI 451
>AT1G56590.1 | chr1:21202250-21204697 REVERSE LENGTH=416
Length = 415
Score = 166 bits (420), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 120/443 (27%), Positives = 204/443 (46%), Gaps = 48/443 (10%)
Query: 6 VSALFLLDIKGRVLVWRDYRGDVSALQAERFFTKLLDKESDAEVLSPVVHDDAGVSYMF- 64
+ +FL+ G V++ + G +F + D+ PV+ + Y+F
Sbjct: 2 LQCIFLISDSGEVMLEKQLTGHRVDRSICAWFWDQYISQGDSFKALPVIA--SPTHYLFQ 59
Query: 65 IQHNNVFLLTASRQNCNAASILLFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEMMD 124
I + + L S+ + FL RV DV Y L E+ ++DNF++VYELLDEM+D
Sbjct: 60 IVRDGITFLACSQVEMPPLMAIEFLCRVADVLSEYLGGLNEDLIKDNFIIVYELLDEMID 119
Query: 125 FGYPQYTEAMILSEFIK-----------TDAYRMEVTQRPPMAVTNAVSWRSEGIRYKKN 173
G+P TE IL E I V+ P + V WR +Y N
Sbjct: 120 NGFPLTTEPSILKEMIAPPNLVSKMLSVVTGNASNVSDTLPSGAGSCVPWRPTDPKYSSN 179
Query: 174 EVFLDVVESVNILVNSNGQIVRSDVIGELKMRTFLSGMPECKLGLNDRVLLEAQGRTTKG 233
EV++D+VE ++ +VN +G++V+ ++ GE++M + L+G P+ L + +LE
Sbjct: 180 EVYVDLVEEMDAIVNRDGELVKCEIYGEVQMNSQLTGFPDLTLSFANPSILE-------- 231
Query: 234 KAIDLDDIKFHQCVRLARFENDRTISFIPPDGSFDLMTYRLSTQVKPLIWVEAQVEKHSR 293
D++FH CVR +E+ + +SF+PPDG F LM+YR+ ++V+ Q+ S
Sbjct: 232 ------DMRFHPCVRYRPWESHQVLSFVPPDGEFKLMSYRVKKLKNTPVYVKPQITSDSG 285
Query: 294 S-RIQITVKTRSQFKERSTATNVEIEVPVPEDSTNPNIRTSMGSAAYAPERDAMVWKIKS 352
+ RI + V RS T ++ + +P ++ ++ ++ G+ + W I
Sbjct: 286 TCRISVLVGIRSD--PGKTIESITLSFQLPHCVSSADLSSNHGTVTILSNKTC-TWTIGR 342
Query: 353 FPGGKEYMCRAEFSL-PSITSEDGMPEKKAPIRVKFEIPYFTVSGIQVRYLKIIEKSGYQ 411
P K +L P + P ++ F+I +SG++ IEK Q
Sbjct: 343 IPKDKTPCLSGTLALEPGLERLHVFPT----FKLGFKIMGIALSGLR------IEKLDLQ 392
Query: 412 ALP-----WVRYITMAGEYELRL 429
+P R T AGE+++RL
Sbjct: 393 TIPPRLYKGFRAQTRAGEFDVRL 415
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.136 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,077,213
Number of extensions: 376514
Number of successful extensions: 858
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 845
Number of HSP's successfully gapped: 5
Length of query: 430
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 329
Effective length of database: 8,337,553
Effective search space: 2743054937
Effective search space used: 2743054937
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 113 (48.1 bits)