BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0541200 Os05g0541200|AK068633
(223 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G11950.1 | chr5:3855072-3856815 FORWARD LENGTH=217 286 8e-78
AT3G53450.1 | chr3:19812977-19815430 REVERSE LENGTH=216 283 4e-77
AT2G28305.1 | chr2:12081186-12084307 FORWARD LENGTH=214 275 1e-74
AT2G37210.2 | chr2:15624253-15626834 REVERSE LENGTH=240 263 8e-71
AT2G35990.1 | chr2:15114070-15116647 FORWARD LENGTH=214 256 8e-69
AT4G35190.1 | chr4:16746724-16748090 FORWARD LENGTH=229 254 2e-68
AT5G06300.1 | chr5:1922042-1925278 REVERSE LENGTH=218 252 9e-68
AT5G03270.1 | chr5:781870-783997 FORWARD LENGTH=230 212 1e-55
AT5G26140.1 | chr5:9130796-9131636 FORWARD LENGTH=144 155 1e-38
>AT5G11950.1 | chr5:3855072-3856815 FORWARD LENGTH=217
Length = 216
Score = 286 bits (731), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 138/200 (69%), Positives = 162/200 (81%)
Query: 14 SRFGTICVFCGSNAGRRRVFGDAALDLGHELVRRGVDLVYGGGSIGLMGLIARTVLDGGR 73
SRF ICVFCGS++G R VF DAA++LG+ELV+R +DLVYGGGS+GLMGLI+R V +GG
Sbjct: 7 SRFRKICVFCGSHSGHREVFSDAAIELGNELVKRKIDLVYGGGSVGLMGLISRRVYEGGL 66
Query: 74 RVVGVIPRALMAVEISGESVGEVIVVQDMHERKAEMARRSKAFIALPGGYGTMEELLEMI 133
V+G+IP+ALM +EISGE+VG+V VV DMHERKA MA+ ++AFIALPGGYGTMEELLEMI
Sbjct: 67 HVLGIIPKALMPIEISGETVGDVRVVADMHERKAAMAQEAEAFIALPGGYGTMEELLEMI 126
Query: 134 TWCQLGIHDKPVGLLNVDGYYDPLLALFDKGEAEGFINSDCRQIFVSAPTASELLTKMEQ 193
TW QLGIH K VGLLNVDGYY+ LLALFD G EGFI R I VSAPTA EL+ KME+
Sbjct: 127 TWSQLGIHKKTVGLLNVDGYYNNLLALFDTGVEEGFIKPGARNIVVSAPTAKELMEKMEE 186
Query: 194 YTRLHQEVAPATSWEISELG 213
YT H VA SW++ ELG
Sbjct: 187 YTPSHMHVASHESWKVEELG 206
>AT3G53450.1 | chr3:19812977-19815430 REVERSE LENGTH=216
Length = 215
Score = 283 bits (725), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 131/201 (65%), Positives = 162/201 (80%)
Query: 14 SRFGTICVFCGSNAGRRRVFGDAALDLGHELVRRGVDLVYGGGSIGLMGLIARTVLDGGR 73
S+FG ICVFCGS+ G++ + DAA+DLG+ELV R +DLVYGGGSIGLMGL+++ V DGGR
Sbjct: 11 SKFGRICVFCGSSQGKKSSYQDAAVDLGNELVLRNIDLVYGGGSIGLMGLVSQAVHDGGR 70
Query: 74 RVVGVIPRALMAVEISGESVGEVIVVQDMHERKAEMARRSKAFIALPGGYGTMEELLEMI 133
V+GVIP+ LM E++GE+VGEV V DMH+RKAEMAR S AFIALPGGYGT+EELLE+I
Sbjct: 71 HVIGVIPKTLMPRELTGETVGEVRAVADMHQRKAEMARHSDAFIALPGGYGTLEELLEVI 130
Query: 134 TWCQLGIHDKPVGLLNVDGYYDPLLALFDKGEAEGFINSDCRQIFVSAPTASELLTKMEQ 193
TW QLGIHDKPVGLLNVDGYY+ LL+ DK EGFI+++ RQI +SAPTA EL+ K+E+
Sbjct: 131 TWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEGFISTNARQIIISAPTAKELVKKLEE 190
Query: 194 YTRLHQEVAPATSWEISELGY 214
Y+ H+ VA WEI + Y
Sbjct: 191 YSPCHESVATKLCWEIERIDY 211
>AT2G28305.1 | chr2:12081186-12084307 FORWARD LENGTH=214
Length = 213
Score = 275 bits (703), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 129/204 (63%), Positives = 159/204 (77%)
Query: 14 SRFGTICVFCGSNAGRRRVFGDAALDLGHELVRRGVDLVYGGGSIGLMGLIARTVLDGGR 73
S+F ICVFCGS+AG + + DAA++LG ELV R +DLVYGGGSIGLMGLI++ V +GGR
Sbjct: 5 SKFKRICVFCGSSAGNKVSYKDAAIELGTELVSRNIDLVYGGGSIGLMGLISQAVFNGGR 64
Query: 74 RVVGVIPRALMAVEISGESVGEVIVVQDMHERKAEMARRSKAFIALPGGYGTMEELLEMI 133
V+GVIP+ LM EI+GE+VGEV V DMH+RKAEMA+ S AFIALPGGYGT+EELLE+I
Sbjct: 65 HVIGVIPKTLMPREITGETVGEVKAVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVI 124
Query: 134 TWCQLGIHDKPVGLLNVDGYYDPLLALFDKGEAEGFINSDCRQIFVSAPTASELLTKMEQ 193
TW QLGIHDKPVGLLNV+GYY+ LL+ DK EGFI+ R I VSAP+A EL+ K+E
Sbjct: 125 TWAQLGIHDKPVGLLNVEGYYNSLLSFIDKAVEEGFISPTARHIIVSAPSAKELVKKLED 184
Query: 194 YTRLHQEVAPATSWEISELGYGRT 217
Y H++VA SWE+ ++G T
Sbjct: 185 YVPRHEKVASKKSWEMEQIGLSPT 208
>AT2G37210.2 | chr2:15624253-15626834 REVERSE LENGTH=240
Length = 239
Score = 263 bits (671), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 127/225 (56%), Positives = 158/225 (70%), Gaps = 24/225 (10%)
Query: 14 SRFGTICVFCGSNAGRRRVFGDAALDLGHELVRRGVDLVYGGGSIGLMGLIARTVLDGGR 73
S+F ICVFCGS+ G++ + DAA+DLG+ELV R +DLVYGGGSIGLMGL+++ V DGGR
Sbjct: 11 SKFRRICVFCGSSQGKKSSYQDAAVDLGNELVSRNIDLVYGGGSIGLMGLVSQAVHDGGR 70
Query: 74 RVVGVIPRALMAVEISGESVGEVIVVQDMHERKAEMARRSKAFIALP------------- 120
V+G+IP+ LM E++GE+VGEV V DMH+RKAEMA+ S AFIALP
Sbjct: 71 HVIGIIPKTLMPRELTGETVGEVRAVADMHQRKAEMAKHSDAFIALPEENNLVKLKNMLS 130
Query: 121 -----------GGYGTMEELLEMITWCQLGIHDKPVGLLNVDGYYDPLLALFDKGEAEGF 169
GYGT+EELLE+ITW QLGIHDKPVGLLNVDGYY+ LL+ DK EGF
Sbjct: 131 WSSCSVKATLKSGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEGF 190
Query: 170 INSDCRQIFVSAPTASELLTKMEQYTRLHQEVAPATSWEISELGY 214
I+ R+I VSAPTA EL+ K+E+Y H+ VA WE+ +GY
Sbjct: 191 ISPTAREIIVSAPTAKELVKKLEEYAPCHERVATKLCWEMERIGY 235
>AT2G35990.1 | chr2:15114070-15116647 FORWARD LENGTH=214
Length = 213
Score = 256 bits (653), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 119/195 (61%), Positives = 147/195 (75%)
Query: 14 SRFGTICVFCGSNAGRRRVFGDAALDLGHELVRRGVDLVYGGGSIGLMGLIARTVLDGGR 73
SRF ICVFCGS++G + + DAAL L H+LV R +DLVYGGGS+GLMGLI++ V DGGR
Sbjct: 6 SRFRRICVFCGSSSGNKTTYHDAALQLAHQLVERNIDLVYGGGSVGLMGLISQAVHDGGR 65
Query: 74 RVVGVIPRALMAVEISGESVGEVIVVQDMHERKAEMARRSKAFIALPGGYGTMEELLEMI 133
V+G+IP++L EI+GES+GEVI V MH+RKAEM R++ AFIALPGGYGT EELLE+I
Sbjct: 66 HVLGIIPKSLAPREITGESIGEVITVSTMHQRKAEMGRQADAFIALPGGYGTFEELLEVI 125
Query: 134 TWCQLGIHDKPVGLLNVDGYYDPLLALFDKGEAEGFINSDCRQIFVSAPTASELLTKMEQ 193
TW QLGIH KPVGLLNVDG+YD LL DK EGF++S R+I VSAP A +LL +E+
Sbjct: 126 TWSQLGIHTKPVGLLNVDGFYDSLLTFIDKAVDEGFVSSTARRIIVSAPNAPQLLQLLEE 185
Query: 194 YTRLHQEVAPATSWE 208
Y H + W+
Sbjct: 186 YVPKHDDFVSKMVWD 200
>AT4G35190.1 | chr4:16746724-16748090 FORWARD LENGTH=229
Length = 228
Score = 254 bits (650), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 121/198 (61%), Positives = 147/198 (74%)
Query: 14 SRFGTICVFCGSNAGRRRVFGDAALDLGHELVRRGVDLVYGGGSIGLMGLIARTVLDGGR 73
SRF +CVFCGS++G+R + DAA DL ELV R ++LVYGGGSIGLMGL+++ V + G
Sbjct: 6 SRFKRVCVFCGSSSGKRECYSDAATDLAQELVTRRLNLVYGGGSIGLMGLVSQAVHEAGG 65
Query: 74 RVVGVIPRALMAVEISGESVGEVIVVQDMHERKAEMARRSKAFIALPGGYGTMEELLEMI 133
V+G+IPR LM EI+GE+ GEVI V DMHERKAEMAR S FIALPGGYGT+EELLE+I
Sbjct: 66 HVLGIIPRTLMDKEITGETYGEVIAVADMHERKAEMARHSDCFIALPGGYGTLEELLEVI 125
Query: 134 TWCQLGIHDKPVGLLNVDGYYDPLLALFDKGEAEGFINSDCRQIFVSAPTASELLTKMEQ 193
W QLGIHDKPVGLLNVDGYY+ LL DK +GFI R IFVSAP A EL+ K+E
Sbjct: 126 AWAQLGIHDKPVGLLNVDGYYNYLLTFIDKAVDDGFIKPSQRHIFVSAPNAKELVQKLEA 185
Query: 194 YTRLHQEVAPATSWEISE 211
Y ++ V + WE+ +
Sbjct: 186 YKPVNDGVIAKSRWEVEK 203
>AT5G06300.1 | chr5:1922042-1925278 REVERSE LENGTH=218
Length = 217
Score = 252 bits (644), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 122/209 (58%), Positives = 157/209 (75%), Gaps = 3/209 (1%)
Query: 14 SRFGTICVFCGSNAGRRRVFGDAALDLGHELVRRGVDLVYGGGSIGLMGLIARTVLDGGR 73
SRF ICVFCGS++G++ + +AA+ LG+ELV R +DLVYGGGS+GLMGL+++ V GGR
Sbjct: 6 SRFKRICVFCGSSSGKKPSYQEAAIQLGNELVERRIDLVYGGGSVGLMGLVSQAVHHGGR 65
Query: 74 RVVGVIPRALMAVEISGESVGEVIVVQDMHERKAEMARRSKAFIALPGGYGTMEELLEMI 133
V+GVIP+ LM EI+GE++GEV V DMH+RKAEMAR++ AFIALPGGYGT+EELLE+I
Sbjct: 66 HVLGVIPKTLMPREITGETIGEVKAVADMHQRKAEMARQADAFIALPGGYGTLEELLEVI 125
Query: 134 TWCQLGIHDKPVGLLNVDGYYDPLLALFDKGEAEGFINSDCRQIFVSAPTASELLTKMEQ 193
TW QLGIH KPVGLLNVDGYY+ LL DK EGFI+ R+I VSAP A EL+ ++E+
Sbjct: 126 TWAQLGIHRKPVGLLNVDGYYNSLLTFIDKAVDEGFISPMARRIIVSAPNAKELVRQLEE 185
Query: 194 YTRLHQEVAPATSW-EISELGYGRTPGAD 221
Y E+ W E+ + Y PG++
Sbjct: 186 YEPEFDEITSKLVWDEVDRISY--VPGSE 212
>AT5G03270.1 | chr5:781870-783997 FORWARD LENGTH=230
Length = 229
Score = 212 bits (540), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 112/190 (58%), Positives = 132/190 (69%), Gaps = 11/190 (5%)
Query: 14 SRFGTICVFCGSNAGRRRVFGDAALDLGHELVRRGVDLVYGGGSIGLMGLIARTVLDGGR 73
SRF +ICVFCGS+ G + + DAA+DL ELV R +DLVYGGGSIGLMGL+++ V DGGR
Sbjct: 16 SRFKSICVFCGSSNGNKASYQDAAIDLAKELVMRKIDLVYGGGSIGLMGLVSQAVHDGGR 75
Query: 74 RVVGV-----------IPRALMAVEISGESVGEVIVVQDMHERKAEMARRSKAFIALPGG 122
+ + +++GE+VGEV V DMH+RKA MA+ S AFI LPGG
Sbjct: 76 HNNNNNGNDDALFCHSVNVSQTNSKLTGETVGEVKEVADMHQRKAVMAKHSDAFITLPGG 135
Query: 123 YGTMEELLEMITWCQLGIHDKPVGLLNVDGYYDPLLALFDKGEAEGFINSDCRQIFVSAP 182
YGT+EELLE+ITW QLGIHDKPVGLLNVDGYYD LL DK EGFI R I VSAP
Sbjct: 136 YGTLEELLEVITWAQLGIHDKPVGLLNVDGYYDALLLFIDKAVEEGFILPTARHIIVSAP 195
Query: 183 TASELLTKME 192
TA EL K+E
Sbjct: 196 TARELFIKLE 205
>AT5G26140.1 | chr5:9130796-9131636 FORWARD LENGTH=144
Length = 143
Score = 155 bits (393), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 81/127 (63%), Positives = 92/127 (72%), Gaps = 1/127 (0%)
Query: 88 ISGESVGEVIVVQDMHERKAEMARRSKAFIALPGG-YGTMEELLEMITWCQLGIHDKPVG 146
ISGE+VGEV +V DMHERKA MA+ + AFIAL G Y TMEELLEMITW QLGIH K VG
Sbjct: 6 ISGETVGEVRIVSDMHERKATMAQEAGAFIALLGERYETMEELLEMITWAQLGIHKKTVG 65
Query: 147 LLNVDGYYDPLLALFDKGEAEGFINSDCRQIFVSAPTASELLTKMEQYTRLHQEVAPATS 206
LLNVDGYY+ LLA FD G EGFI I VSAP+A EL+ KME YT H+ +A S
Sbjct: 66 LLNVDGYYNNLLAFFDTGVEEGFIKQGACNIVVSAPSARELMEKMELYTPSHKYIASHQS 125
Query: 207 WEISELG 213
W++ LG
Sbjct: 126 WKVEPLG 132
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.140 0.417
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,641,787
Number of extensions: 189306
Number of successful extensions: 388
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 386
Number of HSP's successfully gapped: 9
Length of query: 223
Length of database: 11,106,569
Length adjustment: 95
Effective length of query: 128
Effective length of database: 8,502,049
Effective search space: 1088262272
Effective search space used: 1088262272
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 110 (47.0 bits)