BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0541100 Os05g0541100|AK107193
(408 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G72670.1 | chr1:27356898-27358657 REVERSE LENGTH=415 155 3e-38
AT2G26180.1 | chr2:11143433-11144982 REVERSE LENGTH=417 153 1e-37
AT1G17480.1 | chr1:6006675-6008132 REVERSE LENGTH=372 108 4e-24
AT3G22190.1 | chr3:7831280-7833512 REVERSE LENGTH=423 103 2e-22
AT5G03040.1 | chr5:710380-712406 REVERSE LENGTH=462 75 6e-14
AT3G52290.1 | chr3:19394441-19396196 FORWARD LENGTH=431 72 5e-13
AT4G00820.1 | chr4:349300-351307 FORWARD LENGTH=535 67 2e-11
AT3G49260.3 | chr3:18262755-18265859 FORWARD LENGTH=473 64 1e-10
AT3G09710.2 | chr3:2976834-2978900 REVERSE LENGTH=469 64 1e-10
AT1G01110.2 | chr1:52239-54494 FORWARD LENGTH=528 62 4e-10
AT3G15050.1 | chr3:5066879-5067892 REVERSE LENGTH=260 60 1e-09
AT2G26410.1 | chr2:11234651-11236719 REVERSE LENGTH=528 60 3e-09
AT3G59690.1 | chr3:22049572-22051479 FORWARD LENGTH=518 57 2e-08
AT2G33990.1 | chr2:14360502-14361630 REVERSE LENGTH=264 56 3e-08
AT5G13460.1 | chr5:4316323-4318247 FORWARD LENGTH=444 56 4e-08
AT2G43680.1 | chr2:18109302-18111587 FORWARD LENGTH=670 50 3e-06
>AT1G72670.1 | chr1:27356898-27358657 REVERSE LENGTH=415
Length = 414
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 105/340 (30%), Positives = 172/340 (50%), Gaps = 23/340 (6%)
Query: 69 PPRDFRVIRQEWXXXXXXXXXXXXXXXXXXXXXXGIVRLQALVRGRLVRRQLAVTLKCMN 128
PP+DF ++++EW +VR+QA+ RGR VR+Q VTL+CM
Sbjct: 83 PPKDFFLVKREWAATRIQAAFRAFLARQALRALKAVVRIQAIFRGRQVRKQADVTLRCMQ 142
Query: 129 ALLRVQXXXXXXXXXCSADGRDSQDAVGERDGRADPIKQAEEQWCDSQGSVSEVRSKIHM 188
AL+RVQ +DG++ + ++ + DP KQAE+ WCDS GS++EVR+K+ M
Sbjct: 143 ALVRVQARVRAHCNRGPSDGQELEKPSDQQ--KDDPAKQAEKGWCDSPGSINEVRTKLQM 200
Query: 189 RHDAVAKRERAIAYALSHXXXXXXXXXXXXXXXXXLRNHESNRCNHDWSYIEGWMATKPW 248
R + KRERA+ YAL+H +N+ S + + W++++ W+A +PW
Sbjct: 201 RQEGAIKRERAMVYALTHQPRTCPSPAKASKQGSVKKNNGSCKSSPGWNWLDRWVADRPW 260
Query: 249 ESRLMEQSHAELKCSKNSGELNLAGAQLSNASSVKMRGN----RVAAKPPSVLSASSSDF 304
E RLME S+N+ + + + +S +V++R N RV A+PP + S+++S
Sbjct: 261 EGRLME---GPTNSSENARK---SESSVSEHDTVQVRKNNLTTRVLARPPPMSSSATSSE 314
Query: 305 PCDVXXXXXXXXXPARSDGGHGEGPSYMSLTKSAKARQ--------SCNSPFQIQRQRS- 355
+GG+ PSYMSLT+S KA+Q +PF+ ++ S
Sbjct: 315 SSSTSQSPVPFSGSFLEEGGYYRKPSYMSLTQSIKAKQRRSGSSSSCSKTPFEKKQSMSY 374
Query: 356 -GGMSSYKRVALSPLDVQ-SNACSEFSVTSRKLNSLSLKG 393
G ++ + PL+ Q ++ VT R + + S +G
Sbjct: 375 NGDVNVRRSAGSDPLNNQWTDLYPPAQVTGRHMWAKSQRG 414
>AT2G26180.1 | chr2:11143433-11144982 REVERSE LENGTH=417
Length = 416
Score = 153 bits (387), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 111/375 (29%), Positives = 166/375 (44%), Gaps = 39/375 (10%)
Query: 1 MGASGKWIKSLVSLKAAP----EGTTKGRRWTRLWRXXXXXX-XXXXXXXXXXXXXXXXX 55
MGASGKW+KS++ LK E + +LWR
Sbjct: 1 MGASGKWVKSIIGLKKLEKDEIEKGNGKNKKWKLWRTTSVDSWKGFRGKHRSDSDGVDSS 60
Query: 56 XXXXXXXXXXXXXPPRDFRVIRQEWXXXXXXXXXXXXXXXXXXXXXXGIVRLQALVRGRL 115
PP+DF+ +R+EW GIVRLQALVRGR
Sbjct: 61 TVYSAAVATVLRAPPKDFKAVREEWAAIRIQTAFRGFLARRALRALKGIVRLQALVRGRQ 120
Query: 116 VRRQLAVTLKCMNALLRVQXXXXXXXXXCSADGRDSQDAVGERDGRADPIKQAEEQWCDS 175
VR+Q AVTL+CM AL+RVQ + +G+ Q + E ++D +K+ EE WCD
Sbjct: 121 VRKQAAVTLRCMQALVRVQARVRARRVRMTVEGQAVQKLLDEHRTKSDLLKEVEEGWCDR 180
Query: 176 QGSVSEVRSKIHMRHDAVAKRERAIAYALSHXX--XXXXXXXXXXXXXXXLRNHESNRCN 233
+G+V +++SK+ R + KRERA+AYAL+ L++ E ++ +
Sbjct: 181 KGTVDDIKSKLQQRQEGAFKRERALAYALAQKQWRSTTSSNLKTNSSISYLKSQEFDKNS 240
Query: 234 HDWSYIEGWMATKPWESRLMEQ----------SHAELKCSKNSGELNLAGAQLSNASSVK 283
WS++E WMA +PWE+RLM+ H LK + + ++ + +N ++
Sbjct: 241 WGWSWLERWMAARPWETRLMDTVDTAATPPPLPHKHLKSPETA---DVVQVRRNNVTT-- 295
Query: 284 MRGNRVAAKPPSVLSASSSDFPCD---VXXXXXXXXXPARSDGG----------HGEGPS 330
RV+AKPP + +SS + + P G PS
Sbjct: 296 ----RVSAKPPPHMLSSSPGYEFNESSGSSSICTSTTPVSGKTGLVSDNSSSQAKKHKPS 351
Query: 331 YMSLTKSAKARQSCN 345
YMSLT+S KA++ N
Sbjct: 352 YMSLTESTKAKRRTN 366
>AT1G17480.1 | chr1:6006675-6008132 REVERSE LENGTH=372
Length = 371
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 129/290 (44%), Gaps = 43/290 (14%)
Query: 69 PPRDFRVIRQEWXXXXXXXXXXXXXXXXXXXXXXGIVRLQALVRGRLVRRQLAVTLKCMN 128
PPRDF ++++EW +VR+QA+ RGR VR+Q AVTL+CM
Sbjct: 84 PPRDFLMVKREWASTRIQAAFRAFLARQAFRALKAVVRIQAIFRGRQVRKQAAVTLRCMQ 143
Query: 129 ALLRVQXXXXXXXXXCSADGRDSQDAVGERDGRADPIKQAEEQWCDSQGSVSEVRSKIHM 188
AL+RVQ A R D++ +D P+KQ E+ WC S S+ EV++K+ M
Sbjct: 144 ALVRVQSR-------VRAHRRAPSDSLELKD----PVKQTEKGWCGSPRSIKEVKTKLQM 192
Query: 189 RHDAVAKRERAIAYALSHXXXXXXXXXXXXXXXXXLRNHESNRCNHDWSYIE--GWMATK 246
+ + KRERA+ YAL+H + +H + + W++ + G + K
Sbjct: 193 KQEGAIKRERAMVYALTH-----QSRTCPSPSGRAITHHGLRKSSPGWNWYDDVGTFSRK 247
Query: 247 PWESRLMEQSHAELKCSKNSGELNLAGAQLSNASSVKMRGNRVAAKPPSVLSASSSDFPC 306
ES ++ + + + KN N SS ++ R P V S S D
Sbjct: 248 SSESSVLSE-YETVTVRKN------------NLSSTRVLA-RPPLLLPPVSSGMSYDSLH 293
Query: 307 DVXXXXXXXXXPAR------SDGGHGEGPSYMSLTKSAKARQ-----SCN 345
D P GG+ PSYMSLT+S +A+Q SCN
Sbjct: 294 DETSTSSTSQSPVAFSSSVLDGGGYYRKPSYMSLTQSTQAKQRQSGLSCN 343
>AT3G22190.1 | chr3:7831280-7833512 REVERSE LENGTH=423
Length = 422
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 87/154 (56%), Gaps = 8/154 (5%)
Query: 103 GIVRLQALVRGRLVRRQLAVTLKCMNALLRVQXXXXXXXXXCSADGRDSQDAVGERDGRA 162
G+VRLQALVRG VR+Q AVTL+CM AL+RVQ + + + A
Sbjct: 112 GLVRLQALVRGHAVRKQAAVTLRCMQALVRVQARVRARRVRLALELESETSQQTLQQQLA 171
Query: 163 DP--IKQAEEQWCDSQGSVSEVRSKIHMRHDAVAKRERAIAYALSHXXXXXXXXXXXXXX 220
D +++ EE WCDS GSV ++++K+ R +A AKRERA+AYAL+H
Sbjct: 172 DEARVREIEEGWCDSIGSVEQIQAKLLKRQEAAAKRERAMAYALTHQWQAGTRLLSAHS- 230
Query: 221 XXXLRNHESNRCNHDWSYIEGWMATKPWESRLME 254
+ ++ N W+++E WMA +PWE+R ++
Sbjct: 231 -----GFQPDKNNWGWNWLERWMAVRPWENRFLD 259
>AT5G03040.1 | chr5:710380-712406 REVERSE LENGTH=462
Length = 461
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 117/287 (40%), Gaps = 36/287 (12%)
Query: 103 GIVRLQALVRGRLVRRQLAVTLKCMNALLRVQXXXXXXXXXCSADGRDSQDAVGERDGRA 162
G+VRL+ L+ G +V+RQ A TLKCM L RVQ S + + Q + ++ +
Sbjct: 139 GLVRLKLLMEGSVVKRQAANTLKCMQTLSRVQSQIRARRIRMSEENQARQKQLLQKHAKE 198
Query: 163 DPIKQAEEQWCDSQGSVSEVRSKIHMRHDAVAKRERAIAYALSHXXXXXXXXXXXXXXXX 222
+ + W DS S +V + + +++A +RERA+AY+ SH
Sbjct: 199 LAGLKNGDNWNDSIQSKEKVEANLLSKYEATMRRERALAYSYSHQQNWKNNSKSGNPMFM 258
Query: 223 XLRNHESNRCNHDWSYIEGWMATKPWESRLMEQSH------AELKCSKNSGE----LNLA 272
N WS++E WMA +P ES EQS+ A +K S N E L
Sbjct: 259 DPSN-----PTWGWSWLERWMAGRPLESSEKEQSNSNNDNAASVKGSINRNEAAKSLTRN 313
Query: 273 GAQLSNASSVKMRG-----NRVAAKP-PSVLSASSSDFPCDVXXXX-----------XXX 315
G+ N S RG N + P PS L+ SS D
Sbjct: 314 GSTQPNTPS-SARGTPRNKNSFFSPPTPSRLNQSSRKSNDDDSKSTISVLSERNRRHSIA 372
Query: 316 XXPARSD---GGHGEGPSYMSLTKSAKARQSCNSPFQIQRQRSGGMS 359
R D G PSYM TKSA+AR SP Q + G +
Sbjct: 373 GSSVRDDESLAGSPALPSYMVPTKSARARLKPQSPLGGTTQENEGFT 419
>AT3G52290.1 | chr3:19394441-19396196 FORWARD LENGTH=431
Length = 430
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 110/259 (42%), Gaps = 29/259 (11%)
Query: 103 GIVRLQALVRGRLVRRQLAVTLKCMNALLRVQXXXXXXXXXCSADGRDSQDAVGERDGRA 162
G+VRL++LV+G+ VRRQ TL+ M L RVQ S D + + ++ +
Sbjct: 132 GLVRLKSLVQGKCVRRQATSTLQSMQTLARVQYQIRERRLRLSEDKQALTRQLQQKHNKD 191
Query: 163 DPIKQAEEQWCDSQGSVSEVRSKIHMRHDAVAKRERAIAYALSHXXXXXXXXXXXXXXXX 222
+ E W DS S +V + + + A +RE+A+AYA SH
Sbjct: 192 --FDKTGENWNDSTLSREKVEANMLNKQVATMRREKALAYAFSHQNTWKNSTKMGSQTFM 249
Query: 223 XLRNHESNRCNHDWSYIEGWMATKPWESRLMEQSHAELKCSKNS------GELNLAGAQL 276
+ N + WS++E WMA +P E+ + +AE S S E+ G L
Sbjct: 250 -----DPNNPHWGWSWLERWMAARPNENHSLTPDNAEKDSSARSVASRAMSEMIPRGKNL 304
Query: 277 S---------NASSVKMRGNRVAAKPPSVLSASSSDFPCDVXXXXXXXXXPARSDGGHGE 327
S SS ++R +V ++ + + + S+ PC+ R D
Sbjct: 305 SPRGKTPNSRRGSSPRVR--QVPSEDSNSIVSFQSEQPCNRRHSTCGSIPSTRDDESFTS 362
Query: 328 G-----PSYMSLTKSAKAR 341
P YM+ T++AKAR
Sbjct: 363 SFSQSVPGYMAPTQAAKAR 381
>AT4G00820.1 | chr4:349300-351307 FORWARD LENGTH=535
Length = 534
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 26/165 (15%)
Query: 103 GIVRLQALVRGRLVRRQLAVTLKCMNALLRVQXXXXXXXXXCSADG------RDSQDA-- 154
G+V+LQALVRG VR+Q +TL+CM AL+RVQ S DG D+Q
Sbjct: 156 GLVKLQALVRGHNVRKQAKMTLRCMQALVRVQSRVLDQRKRLSHDGSRKSAFSDTQSVLE 215
Query: 155 ------VGERDGRADPIKQAEEQWCDSQGSVSEVRSKIHMRHDAVAKRE--RAIAYALSH 206
+ +R + E W D ++ EV++ + R D +RE +I+ A SH
Sbjct: 216 SRYLQEISDRRSMSREGSSIAEDWDDRPHTIEEVKAMLQQRRDNALRRESNNSISQAFSH 275
Query: 207 XXXXXXXXXXXXXXXXXLRNHESNRCNHDWSYIEGWMATKPWESR 251
+E R +++ WMA+KPW+ R
Sbjct: 276 QVRRTRGSYSTGD------EYEEERPK----WLDRWMASKPWDKR 310
>AT3G49260.3 | chr3:18262755-18265859 FORWARD LENGTH=473
Length = 472
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 78/165 (47%), Gaps = 23/165 (13%)
Query: 103 GIVRLQALVRGRLVRRQLAVTLKCMNALLRVQXXXXXXXXXCSAD-------------GR 149
G+VRLQALVRG VR+Q +T+KCM AL+RVQ + D G
Sbjct: 144 GLVRLQALVRGNHVRKQAQMTMKCMQALVRVQGRVRARRLQVAHDRFKKQFEEEEKRSGM 203
Query: 150 DSQDAVGE---RDGRADPIKQAEEQWCDSQGSVSEVRSKIHMRHDAVAKRERAIAYALSH 206
+ + VG + R P K E ++ S+ + + K R + + KRERA+AYA ++
Sbjct: 204 EKPNKVGFANLKTEREKPKKLHEV----NRTSLYQTQGKEKERSEGMMKRERALAYAYTY 259
Query: 207 XXXXXXXXXXXXXXXXXLRNHESNRCNHDWSYIEGWMATKPWESR 251
L ++ +R W++++ WM+++P+ R
Sbjct: 260 ---QRQMQHTNSEEGIGLSSNGPDRNQWAWNWLDHWMSSQPYTGR 301
>AT3G09710.2 | chr3:2976834-2978900 REVERSE LENGTH=469
Length = 468
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 93/216 (43%), Gaps = 24/216 (11%)
Query: 103 GIVRLQALVRGRLVRRQLAVTLKCMNALLRVQXXXXXXXXXCSADGRDSQDAVGERDGRA 162
G RL+ L+ G +V+RQ A+TLKCM L RVQ S + + + ++ +
Sbjct: 132 GQERLKLLMEGSVVQRQAAITLKCMQTLSRVQSQIRSRRIRMSEENQARHKQLLQKHAKE 191
Query: 163 -----------DPIKQAEEQ---WCDSQGSVSEVRSKIHMRHDAVAKRERAIAYALSHXX 208
I + + W S S +V + + +++A +RERA+AYA +H
Sbjct: 192 LGGLKLFMRLFKFIVVSSDNGGNWNYSNQSKEQVEAGMLHKYEATMRRERALAYAFTHQQ 251
Query: 209 XXXXXXXXXXXXXXXLRNHESNRCNHDWSYIEGWMATKPWESRLMEQSHAELKCS--KNS 266
N WS++E WMA +PWES EQ+ S KNS
Sbjct: 252 NLKSFSKTANPMFMDPSN-----PTWGWSWLERWMAGRPWESSEKEQNTTNNDNSSVKNS 306
Query: 267 GELNLAGAQLSNASSVKMRGNRVAAKPPSVLSASSS 302
N G + + +S+ R ++ P+ SASS+
Sbjct: 307 TNRNSQGGETAKSSN---RNKLNSSTKPNTPSASST 339
>AT1G01110.2 | chr1:52239-54494 FORWARD LENGTH=528
Length = 527
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 84/202 (41%), Gaps = 23/202 (11%)
Query: 103 GIVRLQALVRGRLVRRQLAVTLKCMNALLRVQXXXXXXXXXCSADG-------------- 148
G+V+LQALVRG VR+Q +TL+CM AL+RVQ S DG
Sbjct: 145 GLVKLQALVRGHNVRKQAKMTLRCMQALVRVQSRVLDQRKRLSHDGSRKSAFSDSHAVFE 204
Query: 149 -RDSQDAVGERDGRADPIKQAEEQWCDSQGSVSEVRSKIHMRHDAVAKRERA-IAYALSH 206
R QD + +R + A E W D ++ V+ + R D + ++ ++ A S
Sbjct: 205 SRYLQD-LSDRQSMSREGSSAAEDWDDRPHTIDAVKVMLQRRRDTALRHDKTNLSQAFSQ 263
Query: 207 XXXXXXXXXXXXXXXXXLRNHESNRCNHDWSYIEGWMATKPWESRLMEQSHAELKCSKNS 266
+HE +++ WMAT+PW+ R ++ + + S +
Sbjct: 264 KMWRTVGNQSTEG------HHEVELEEERPKWLDRWMATRPWDKRASSRASVDQRVSVKT 317
Query: 267 GELNLAGAQLSNASSVKMRGNR 288
E++ + + RG R
Sbjct: 318 VEIDTSQPYSRTGAGSPSRGQR 339
>AT3G15050.1 | chr3:5066879-5067892 REVERSE LENGTH=260
Length = 259
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 61/146 (41%), Gaps = 6/146 (4%)
Query: 106 RLQALVRGRLVRRQLAVTLKCMNALLRVQXXXXXXXXXCSADGRDSQDAVGERDGRADPI 165
R +L++G V Q + L +++ +Q GR + R +
Sbjct: 77 RFNSLIQGHTVMNQTSTALNVIHSWYDIQNQIRARRLYMVTQGRLQHKRLENRLKLEIKL 136
Query: 166 KQAEEQWCDSQGSVSEVRSKIHMRHDAVAKRERAIAYALSHXXXXXXXXXXXXXXXXXLR 225
+ E +WC ++ E+ +KI + +A KRERA+AYA SH
Sbjct: 137 HELEVEWCGGSETMEEILAKIQQKEEATVKRERAMAYAFSHQWRANATQYLGQA------ 190
Query: 226 NHESNRCNHDWSYIEGWMATKPWESR 251
+ + + WS+ E W+A +PWE R
Sbjct: 191 SFNLGKESWGWSWKERWIAARPWEIR 216
>AT2G26410.1 | chr2:11234651-11236719 REVERSE LENGTH=528
Length = 527
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 73/154 (47%), Gaps = 7/154 (4%)
Query: 103 GIVRLQALVRGRLVRRQLAVTLKCMNALLRVQXXXXXXXXXCSADGRDSQDAVGERDGRA 162
G+ RL++L++G+ V+RQ+ L M L R+Q SA+ + + ++ +
Sbjct: 172 GMARLKSLLQGKYVKRQMNAMLSSMQTLTRLQTQIQERRNRLSAENKTRHRLIQQKGHQK 231
Query: 163 DPIKQ--AEEQWCDSQGSVSEVRSKIHMRHDAVAKRERAIAYALSHXXXXXXXXXXXXXX 220
+ + + S S ++ ++ R +A +RERA+AYA SH
Sbjct: 232 ENHQNLVTAGNFDSSNKSKEQIVARSVNRKEASVRRERALAYAYSHQQTWRNSSKLPHQT 291
Query: 221 XXXLRNHESNRCNHDWSYIEGWMATKPWESRLME 254
++N + WS++E WMA++PW++ ++
Sbjct: 292 LM-----DTNTTDWGWSWLERWMASRPWDAESID 320
>AT3G59690.1 | chr3:22049572-22051479 FORWARD LENGTH=518
Length = 517
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 52/105 (49%), Gaps = 7/105 (6%)
Query: 103 GIVRLQALVRGRLVRRQLAVTLKCMNALLRVQXXXXXXXXXCSAD-GRDSQDAVGERDGR 161
G+VRLQ +VRG V+RQ +K M L+RVQ + R+ +D R
Sbjct: 193 GLVRLQGVVRGHSVKRQTMNAMKYMQLLVRVQTQVQSRRIQMLENRARNDKDDTKLVSSR 252
Query: 162 ADPIKQAEEQWCDSQGSVSEVRSKIHMRHDAVAKRERAIAYALSH 206
+ W DS + E ++H + DA+ KRER++AYA SH
Sbjct: 253 M------SDDWDDSVLTKEEKDVRLHRKIDAMIKRERSMAYAYSH 291
>AT2G33990.1 | chr2:14360502-14361630 REVERSE LENGTH=264
Length = 263
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 64/152 (42%), Gaps = 13/152 (8%)
Query: 106 RLQALVRGRL------VRRQLAVTLKCMNALLRVQXXXXXXXXXCSADGRDSQDAVGERD 159
RL+ + R +L V+ Q VTL+ +++ ++Q + R + +
Sbjct: 68 RLKGIARAKLSTEKQSVKNQAVVTLRYLHSWSKIQSEIKARRVCMVTEWRLKNKRLEHQQ 127
Query: 160 GRADPIKQAEEQWCDSQGSVSEVRSKIHMRHDAVAKRERAIAYALSHXXXXXXXXXXXXX 219
+ E +W + E+ +I R +A KRERA+AYA SH
Sbjct: 128 KLEAKLHDVEVEWNGGSETKDEILERILQREEATIKRERALAYAFSH-------QWKADG 180
Query: 220 XXXXLRNHESNRCNHDWSYIEGWMATKPWESR 251
L ++E N WS+ E W++ +PWE R
Sbjct: 181 KTQWLGSYELGNTNWGWSWKERWISARPWEVR 212
>AT5G13460.1 | chr5:4316323-4318247 FORWARD LENGTH=444
Length = 443
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 68/154 (44%), Gaps = 17/154 (11%)
Query: 103 GIVRLQALVRGRLVRRQLAVTLKCMNALLRVQXXXXXXXXXCSAD-GRDSQDAVGERDGR 161
GIV+LQA +RGR VRRQ TLKC+ +++ +Q RD +++ D
Sbjct: 135 GIVKLQAYIRGRAVRRQAMTTLKCLQSVVNIQSQVCGKRTQIPGGVHRDYEESNIFNDNI 194
Query: 162 ADPIKQAEEQWCDSQGSVSEVRSKIHMRHDAVAKRERAIAYALSHXXXXXXXXXXXXXXX 221
+++W DS + E + + + +A +RER YA++H
Sbjct: 195 LKVDTNGQKRWDDSLLTKEEKEAVVMSKKEASLRRERIKEYAVTHRKSAESYQ------- 247
Query: 222 XXLRNHESNRCNHDWSY-IEGWMATKPWESRLME 254
R N W Y ++ W+ T+ +S+ +E
Sbjct: 248 --------KRSNTKWKYWLDEWVDTQLTKSKELE 273
>AT2G43680.1 | chr2:18109302-18111587 FORWARD LENGTH=670
Length = 669
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 4/103 (3%)
Query: 103 GIVRLQALVRGRLVRRQLAVTLKCMNALLRVQXXXXXXXXXCSADGRDSQDAVGERDGRA 162
G+VRLQ +VRG V+RQ +K M ++RVQ ++Q V + + +
Sbjct: 347 GLVRLQGVVRGYSVKRQTINAMKYMQQVVRVQSQIQSRRIKM----LENQAQVEKDEAKW 402
Query: 163 DPIKQAEEQWCDSQGSVSEVRSKIHMRHDAVAKRERAIAYALS 205
+ + W DS + E S+ + DA+ KRER++AYA S
Sbjct: 403 AASEAGNDNWDDSVLTKEERDSRSQRKTDAIIKRERSMAYAYS 445
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.315 0.127 0.381
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,335,995
Number of extensions: 195319
Number of successful extensions: 619
Number of sequences better than 1.0e-05: 16
Number of HSP's gapped: 588
Number of HSP's successfully gapped: 16
Length of query: 408
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 307
Effective length of database: 8,337,553
Effective search space: 2559628771
Effective search space used: 2559628771
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 113 (48.1 bits)