BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0533600 Os05g0533600|AK067577
(915 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G18240.1 | chr4:10082221-10087044 FORWARD LENGTH=1041 1015 0.0
AT1G11720.2 | chr1:3951597-3956840 FORWARD LENGTH=1095 376 e-104
AT5G65685.1 | chr5:26273252-26275864 REVERSE LENGTH=461 250 3e-66
AT5G24300.1 | chr5:8266934-8270860 FORWARD LENGTH=653 211 2e-54
AT3G01180.1 | chr3:62456-65678 REVERSE LENGTH=793 211 2e-54
AT1G32900.1 | chr1:11920582-11923506 REVERSE LENGTH=611 187 3e-47
>AT4G18240.1 | chr4:10082221-10087044 FORWARD LENGTH=1041
Length = 1040
Score = 1015 bits (2624), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 494/847 (58%), Positives = 636/847 (75%), Gaps = 28/847 (3%)
Query: 86 ISNLQLEDLIQMIQNTEKNIMLLNQARLQALEHVETVLKEKEDLQRKLKILETRLSETDA 145
IS+ Q +L+ MI++ EKNI+ L++AR AL+ + +L +KE LQ ++ +LE +LSETD
Sbjct: 180 ISDGQFGELMTMIRSAEKNILRLDEARATALDDLNKILSDKEALQGEINVLEMKLSETDE 239
Query: 146 RLKLSAE----------------GQFGTEINDSLPVL----ELDDIKEENMLLKDDIQFL 185
R+K +A+ + + I VL EL+ +K EN+ L++DI+ L
Sbjct: 240 RIKTAAQEKAHVELLEEQLEKLRHEMISPIESDGYVLALSKELETLKLENLSLRNDIEML 299
Query: 186 KTMLIEVAETENSIFTLEKERALLDASLRELESRFIDAQADM--LKSDPRQYDAWWEKVE 243
K+ L V +T + LEKE + L++S+++LES+ +Q D+ L + + W KVE
Sbjct: 300 KSELDSVKDTGERVVVLEKECSGLESSVKDLESKLSVSQEDVSQLSTLKIECTDLWAKVE 359
Query: 244 NLGDLLETATNKVENAAMVLGRNHDLEDKVDKLEASLAEANISKFSC----YFVDLLQEK 299
L LL+ AT + E A +VL +N DL +KVDK+E SL EAN+ K S + +L+Q K
Sbjct: 360 TLQLLLDRATKQAEQAVIVLQQNQDLRNKVDKIEESLKEANVYKESSEKIQQYNELMQHK 419
Query: 300 IKSVEERFQVCNHEMHSQIELYENSIAEFHDILSKLVEETEKRSLEHSASSMPSELWSRI 359
+ +EER + + E+ S ++LY+ SI EF + L L EE++K+S + MP + WSR+
Sbjct: 420 VTLLEERLEKSDAEIFSYVQLYQESIKEFQETLESLKEESKKKSRDEPVDDMPWDYWSRL 479
Query: 360 SLLIDGWLLEKRISYNDANTLREMVRKRDSCLREAYLSCRGMKDREIVDNFLKITLPGTS 419
L +DGWLLEK+I+ NDA+ LR+MV K+D + + Y+ + +R+ + FLK+ TS
Sbjct: 480 LLTVDGWLLEKKIASNDADLLRDMVWKKDRRIHDTYIDVKDKNERDAISAFLKLVSSPTS 539
Query: 420 SGLHIIHIAAEMAPVAKVGGLADVISGLGKALQKKGHLVEIILPKYDCMQNDQVNNLKVL 479
SGL+++HIAAEMAPVAKVGGL DV++GLGKALQ+KGHLVEIILPKYDCMQ D+V +L+ L
Sbjct: 540 SGLYVVHIAAEMAPVAKVGGLGDVVAGLGKALQRKGHLVEIILPKYDCMQYDRVRDLRAL 599
Query: 480 DVVVQSYFEGNLFNNKIWTGTVEGLPVYFIEPQHPAKFFWRAQYYGEHDDFKRFAYFSRA 539
D VV+SYF+G L+ NKIW GTVEGLPV+FIEPQHP+KFFWR Q+YGE DDF+RF+YFSRA
Sbjct: 600 DTVVESYFDGKLYKNKIWIGTVEGLPVHFIEPQHPSKFFWRGQFYGEQDDFRRFSYFSRA 659
Query: 540 ALELLYQSQKKIDIIHCHDWQTAFVAPLYWEAYANLGFNSARICFTCHNFEYQGAAPAQD 599
ALELL QS KK DIIHCHDWQTAFVAPLYW+ YA G +SARICFTCHNFEYQG A A +
Sbjct: 660 ALELLLQSGKKPDIIHCHDWQTAFVAPLYWDLYAPKGLDSARICFTCHNFEYQGTASASE 719
Query: 600 LACCGLDVQQLDREDRMRDNSHG-RINVVKGAIVYSNIVTTVSPTYALEVRS-EGGRGLQ 657
L CGLDV QL+R DRM+D+S G R+N VKGAI++SNIVTTVSPTYA EVR+ EGG+GL
Sbjct: 720 LGSCGLDVNQLNRPDRMQDHSSGDRVNPVKGAIIFSNIVTTVSPTYAQEVRTAEGGKGLH 779
Query: 658 DSLKLHSRKFVGILNGIDTDTWNPSTDRHLKVQYNANDLQGKAANKAALRKQLNLSSTNA 717
+L HS+KF+GILNGIDTD+WNP+TD LK Q+NA DLQGK NK ALRKQL LSS +
Sbjct: 780 STLNFHSKKFIGILNGIDTDSWNPATDPFLKAQFNAKDLQGKEENKHALRKQLGLSSAES 839
Query: 718 SQPLVGCITRLVPQKGVHLIRHAIYKTAELGGQFVLLGSSPVPHIQREFEGIADHFQNNN 777
+PLVGCITRLVPQKGVHLIRHAIY+T ELGGQFVLLGSSPVPHIQREFEGI F++++
Sbjct: 840 RRPLVGCITRLVPQKGVHLIRHAIYRTLELGGQFVLLGSSPVPHIQREFEGIEQQFKSHD 899
Query: 778 NIRLLLKYDDSLSHWIYAASDMFIVPSMFEPCGLTQMIAMRYGSVPIVRKTGGLNDSVFD 837
++RLLLKYD++LSH IYAASD+FI+PS+FEPCGLTQMIAMRYGS+PI RKTGGLNDSVFD
Sbjct: 900 HVRLLLKYDEALSHTIYAASDLFIIPSIFEPCGLTQMIAMRYGSIPIARKTGGLNDSVFD 959
Query: 838 FDDETIPKELRNGFTFVHPDEKALSGAMERAFNYYNRKPEVWKQLVQKDMRIDFSWASSA 897
DD+TIP + +NGFTF DE+ + A+ERAFN+Y + E W +LV+K M IDFSW SSA
Sbjct: 960 IDDDTIPTQFQNGFTFQTADEQGFNYALERAFNHYKKDEEKWMRLVEKVMSIDFSWGSSA 1019
Query: 898 SQYEDIY 904
+QYE++Y
Sbjct: 1020 TQYEELY 1026
>AT1G11720.2 | chr1:3951597-3956840 FORWARD LENGTH=1095
Length = 1094
Score = 376 bits (965), Expect = e-104, Method: Compositional matrix adjust.
Identities = 211/491 (42%), Positives = 286/491 (58%), Gaps = 53/491 (10%)
Query: 422 LHIIHIAAEMAPVAKVGGLADVISGLGKALQKKGHLVEIILPKYDCMQNDQVNNLKVLDV 481
LHI+HIA EMAP+AKVGGL DV++ L +A+Q+ H V+I+ PKYDC++++ V +L+
Sbjct: 646 LHIVHIAVEMAPIAKVGGLGDVVTSLSRAVQELNHNVDIVFPKYDCIKHNFVKDLQF--- 702
Query: 482 VVQSYFEGNLFNNKIWTGTVEGLPVYFIEPQHPAKFFWRAQYYGEHDDFKRFAYFSRAAL 541
+SY G K+W G VEGL VYF++PQ+ F R YG DD RF +F AAL
Sbjct: 703 -NRSYHWGGT-EIKVWHGKVEGLSVYFLDPQN--GLFQRGCVYGCADDAGRFGFFCHAAL 758
Query: 542 ELLYQSQKKIDIIHCHDWQTAFVAPLYWEAYANLGFNSARICFTCHNFEYQGAAPAQDLA 601
E L Q DI+HCHDW +A V+ L+ + Y G RI FT HN E+ GA
Sbjct: 759 EFLLQGGFHPDILHCHDWSSAPVSWLFKDHYTQYGLIKTRIVFTIHNLEF-GA------- 810
Query: 602 CCGLDVQQLDREDRMRDNSHGRINVVKGAIVYSNIVTTVSPTYALEVRSEGGRGLQDSLK 661
N + A+ +++ TTVSPTYA EV +
Sbjct: 811 -----------------------NAIGKAMTFADKATTVSPTYAKEVAG------NSVIS 841
Query: 662 LHSRKFVGILNGIDTDTWNPSTDRHLKVQYNA-NDLQGKAANKAALRKQLNLSSTNASQP 720
H KF GI+NGID D W+P D + V Y + N ++GK A K L+ +L L S A P
Sbjct: 842 AHLYKFHGIINGIDPDIWDPYNDNFIPVPYTSENVVEGKRAAKEELQNRLGLKS--ADFP 899
Query: 721 LVGCITRLVPQKGVHLIRHAIYKTAELGGQFVLLGSSPVPHIQREFEGIAD--HFQNNNN 778
+VG ITRL QKG+HLI+HAI++T E GQ VLLGS+P P IQ +F +A+ H + +
Sbjct: 900 VVGIITRLTHQKGIHLIKHAIWRTLERNGQVVLLGSAPDPRIQNDFVNLANQLHSSHGDR 959
Query: 779 IRLLLKYDDSLSHWIYAASDMFIVPSMFEPCGLTQMIAMRYGSVPIVRKTGGLNDSVFDF 838
RL+L YD+ LSH IYA +D +VPS+FEPCGLTQ+IAMRYG+VP+VRKTGGL D+VFD
Sbjct: 960 ARLVLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLIAMRYGAVPVVRKTGGLFDTVFDV 1019
Query: 839 DDETIPKELR----NGFTFVHPDEKALSGAMERAFNYYNRKPEVWKQLVQKDMRIDFSWA 894
D + + + NGF+F D + A+ RA + + E + L + M D+SW
Sbjct: 1020 DHDKERAQAQVLEPNGFSFDGADAPGVDYALNRAISAWYDGREWFNSLCKTVMEQDWSWN 1079
Query: 895 SSASQYEDIYQ 905
A +Y ++Y
Sbjct: 1080 RPALEYLELYH 1090
>AT5G65685.1 | chr5:26273252-26275864 REVERSE LENGTH=461
Length = 460
Score = 250 bits (638), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 123/324 (37%), Positives = 196/324 (60%), Gaps = 8/324 (2%)
Query: 353 SELWSRISLLIDGWLLEKRISYNDANTLREMVRKRDSCLREAYLSCRGMKDREIVDNFLK 412
S L+ + L ID ++ ++ +A+++R++V++ ++ + L D EI+ +
Sbjct: 122 SSLFWELLLRIDSMVINGLVNIEEASSMRKLVKEHEANISVFPLDVLQQGDAEILAELRR 181
Query: 413 ITLPGTSSGLHIIHIAAEMAPVAKVGGLADVISGLGKALQKKGHLVEIILPKYDCMQNDQ 472
T G +GLH+IHI EMAP+ VG LA I+GL ALQ++G++VE+ILPKY + D+
Sbjct: 182 FTNKGKRNGLHVIHICTEMAPLVSVGPLASYITGLSCALQEEGYMVEVILPKYSTLDLDE 241
Query: 473 VNNLKVLDVVVQSYFEGNLFNNKIWTGTVEGLPVYFIEPQHPAKFFWRAQYYGEHDDFKR 532
+ L+ ++ SYF+G L N+IW G V G+ V I+P + + F R + YG DDF R
Sbjct: 242 IEGLREIEADAYSYFDGQLHANRIWNGVVSGIGVTLIQPVYYSSMFSRDKVYGYQDDFDR 301
Query: 533 FAYFSRAALELLYQSQKKIDIIHCHDWQTAFVAPLYWEAYANLGFNSARICFTCHNFEYQ 592
FAYFSRA+L+ + +S K+ D++H H+WQTA V PL+W+ + N G RI TC +F+ +
Sbjct: 302 FAYFSRASLDYIAKSGKQPDVLHIHNWQTAIVGPLFWDVFVNQGLEGTRILLTCQDFD-K 360
Query: 593 GAAPAQDLACCGLDVQQLDREDRMRDNSHGR-INVVKGAIVYSNIVTTVSPTYALEVRSE 651
G P + L CGLD +L R DR++DN++ +N++KG +VYSN V +S +++
Sbjct: 361 GLVPPEKLELCGLDPAELHRLDRLQDNTNPHFVNILKGGVVYSNKVVIMSSSHS------ 414
Query: 652 GGRGLQDSLKLHSRKFVGILNGID 675
GL+ +L +H K G+D
Sbjct: 415 SIPGLEPTLAIHKDKLFFAPFGMD 438
>AT5G24300.1 | chr5:8266934-8270860 FORWARD LENGTH=653
Length = 652
Score = 211 bits (537), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 159/513 (30%), Positives = 241/513 (46%), Gaps = 43/513 (8%)
Query: 423 HIIHIAAEMAPVAKVGGLADVISGLGKALQKKGHLVEIILPKY--DCMQNDQVNNLKVLD 480
+++ + +E AP +K GGL DV L AL +GH V +I P+Y + K L
Sbjct: 143 NLVFVTSEAAPYSKTGGLGDVCGSLPIALAGRGHRVMVISPRYLNGTAADKNYARAKDLG 202
Query: 481 VVVQSYFEGNLFNNKIWTGTVEGLPVYFIE------PQHPAKFFWRAQYYGEH-----DD 529
+ V G + +G+ F++ P +P YG+ D+
Sbjct: 203 IRVTVNCFGGSQEVSFYHEYRDGVDWVFVDHKSYHRPGNP---------YGDSKGAFGDN 253
Query: 530 FKRFAYFSRAALE------LLYQSQKKIDIIHCHDWQTAFVAPLYWEAYANLG-FNSARI 582
RF AA E L + + + +DW V L Y G + AR
Sbjct: 254 QFRFTLLCHAACEAPLVLPLGGFTYGEKSLFLVNDWHAGLVPILLAAKYRPYGVYKDARS 313
Query: 583 CFTCHNFEYQGAAPAQDLACCGLDVQQLDREDRMRDN---SHG-----RINVVKGAIVYS 634
HN +QG PA GL + + +H +NV+KGAIV S
Sbjct: 314 ILIIHNLAHQGVEPAATYTNLGLPSEWYGAVGWVFPTWARTHALDTGEAVNVLKGAIVTS 373
Query: 635 NIVTTVSPTYALEVRS-EGGRGLQDSLKLHSRKFVGILNGIDTDTWNPSTDRHLKVQYNA 693
+ + TVS YA E+ + EGG GLQD L GI NGI+ D WNPSTD H+ Y+A
Sbjct: 374 DRIITVSQGYAWEITTVEGGYGLQDLLSSRKSVINGITNGINVDEWNPSTDEHIPFHYSA 433
Query: 694 NDLQGKAANKAALRKQLNLSSTNASQPLVGCITRLVPQKGVHLIRHAIYKTAELGGQFVL 753
+D+ K K AL+K+L L P++G I RL QKG+ LI+ A QFV+
Sbjct: 434 DDVSEKIKCKMALQKELGLP-IRPECPMIGFIGRLDYQKGIDLIQTAGPDLMVDDIQFVM 492
Query: 754 LGSSPVPHIQREFEGIADHFQNNNNIRLLLKYDDSLSHWIYAASDMFIVPSMFEPCGLTQ 813
LGS P + + + +++ R + ++ +SH I A D+ ++PS FEPCGL Q
Sbjct: 493 LGSGD-PKYESWMRSMEETYRDK--FRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQ 549
Query: 814 MIAMRYGSVPIVRKTGGLNDSVFDFDD-ETIPKELRNGFTFVHPDEKALSGAMERAFNYY 872
+ AMRYG++P+V TGGL D+V +F+ G+ F + ++ A+ A Y
Sbjct: 550 LYAMRYGTIPVVHGTGGLRDTVENFNPYAEGGAGTGTGWVFTPLSKDSMVSALRLAAATY 609
Query: 873 NRKPEVWKQLVQKDMRIDFSWASSASQYEDIYQ 905
+ W+ L+++ M ++SW ++A QYE ++Q
Sbjct: 610 REYKQSWEGLMRRGMTRNYSWENAAVQYEQVFQ 642
>AT3G01180.1 | chr3:62456-65678 REVERSE LENGTH=793
Length = 792
Score = 211 bits (536), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 161/503 (32%), Positives = 243/503 (48%), Gaps = 40/503 (7%)
Query: 422 LHIIHIAAEMAPVAKVGGLADVISGLGKALQKKGHLVEIILPKYDCMQNDQVNNLKVLDV 481
+++I +AAE AP +K GGL DV L K+L ++GH V +++P+Y + K L V
Sbjct: 301 MNVILVAAECAPFSKTGGLGDVAGALPKSLARRGHRVMVVVPRYA-----EYAEAKDLGV 355
Query: 482 VVQSYFEGNLFNNKIWTGTVEGLPVYFIEPQHPAKFFWRAQYYGEH--DDFKRFAYFSRA 539
+ G + ++G+ FI+ P YG + D KR F +A
Sbjct: 356 RKRYKVAGQDMEVMYFHAFIDGVDFVFID--SPEFRHLSNNIYGGNRLDILKRMVLFCKA 413
Query: 540 ALELLYQ--------SQKKIDIIHCHDWQTAFVAPLYWEAY-ANLG-FNSARICFTCHNF 589
A+E+ + + I +DW TA + P+Y +AY + G R HN
Sbjct: 414 AVEVPWYVPCGGVCYGDGNLAFI-ANDWHTALL-PVYLKAYYRDHGIMKYTRSVLVIHNI 471
Query: 590 EYQGAAPAQDLACCGLDVQQLDREDRMRDNSHG-RINVVKGAIVYSNIVTTVSPTYALEV 648
+QG P D + L LD ++ D G N+ + ++ V TVS Y+ EV
Sbjct: 472 AHQGRGPVDDFSYVDLPSHYLD-SFKLYDPVGGEHFNIFAAGLKAADRVLTVSHGYSWEV 530
Query: 649 RS-EGGRGLQDSLKLHSRKFVGILNGIDTDTWNPSTDRHLK----VQYNANDLQ-GKAAN 702
++ EGG GL + + + KF GI+NGIDT WNP D +L Y+ +L GK
Sbjct: 531 KTLEGGWGLHNIINENDWKFRGIVNGIDTQEWNPEFDTYLHSDDYTNYSLENLHIGKPQC 590
Query: 703 KAALRKQLNLSSTNASQPLVGCITRLVPQKGVHLIRHAIYKTAELGGQFVLLGSS--PVP 760
KAAL+K+L L PL+G I RL QKGV LI A+ Q V+LG+ +
Sbjct: 591 KAALQKELGLP-VRPDVPLIGFIGRLDHQKGVDLIAEAVPWMMSQDVQLVMLGTGRPDLE 649
Query: 761 HIQREFEGIADHFQNNNNIRLLLKYDDSLSHWIYAASDMFIVPSMFEPCGLTQMIAMRYG 820
+ R+ E Q + R + + +H I A +D+ ++PS FEPCGL Q+ AM YG
Sbjct: 650 EVLRQME-----HQYRDKARGWVGFSVKTAHRITAGADILLMPSRFEPCGLNQLYAMNYG 704
Query: 821 SVPIVRKTGGLNDSVFDFDDETIPKELRNGFTFVHPDEKALSGAMERAFNYYNRKPEVWK 880
++P+V GGL D+V FD + E G+TF + L A+ Y E W+
Sbjct: 705 TIPVVHAVGGLRDTVQQFDPYS---ETGLGWTFDSAEAGKLIHALGNCLLTYREYKESWE 761
Query: 881 QLVQKDMRIDFSWASSASQYEDI 903
L ++ M D SW ++A +YE++
Sbjct: 762 GLQRRGMTQDLSWDNAAEKYEEV 784
>AT1G32900.1 | chr1:11920582-11923506 REVERSE LENGTH=611
Length = 610
Score = 187 bits (474), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 170/517 (32%), Positives = 252/517 (48%), Gaps = 52/517 (10%)
Query: 421 GLHIIHIAAEMAPVAKVGGLADVISGLGKALQKKGHLVEIILPKYDCMQNDQVNNLKVLD 480
G+ +I I AE+ P +K GGL DV+ GL AL +GH V I P+YD Q +
Sbjct: 83 GMSVIFIGAEVGPWSKTGGLGDVLGGLPPALAARGHRVMTICPRYD-----QYKDAWDTC 137
Query: 481 VVVQSYFEGNLFNNKIWTGTVEGLPVYFIE-PQHPAKFFWR--AQYYGE------HDDFK 531
VVVQ + N + + G+ F++ P AK + ++ YG +D+
Sbjct: 138 VVVQIKVGDKVENVRFFHCYKRGVDRVFVDHPIFLAKVVGKTGSKIYGPITGVDYNDNQL 197
Query: 532 RFAYFSRAALE----LLYQSQKKI------DIIH-CHDWQTAFVAPLYWEA-YANLG-FN 578
RF+ +AALE L S K D++ +DW TA + P Y ++ Y + G +
Sbjct: 198 RFSLLCQAALEAPQVLNLNSSKYFSGPYGEDVVFVANDWHTALL-PCYLKSMYQSRGVYM 256
Query: 579 SARICFTCHNFEYQGAAPAQDLACCGLDVQ---QLDREDRMRDNSHGR-INVVKGAIVYS 634
+A++ F HN YQG D + L + D D GR IN +K AI+ +
Sbjct: 257 NAKVVFCIHNIAYQGRFAFDDYSLLNLPISFKSSFDFMDGYEKPVKGRKINWMKAAILEA 316
Query: 635 NIVTTVSPTYALEVRSEGGRGLQDSLKLHSRKFVGILNGIDTDTWNPSTDRHLKVQYNAN 694
+ V TVSP YA E+ S RG++ L + GI+NG+D WNPSTD+++ ++Y+
Sbjct: 317 HRVLTVSPYYAQELISGVDRGVELHKYLRMKTVSGIINGMDVQEWNPSTDKYIDIKYDIT 376
Query: 695 DLQ-GKAANKAALRKQLNLSSTNASQPLVGCITRLVPQKGVHLIRHAIYKTAELGGQFVL 753
+ K K AL+ + L + P++G I RL QKG ++ AI K L Q V+
Sbjct: 377 TVTDAKPLIKEALQAAVGLP-VDRDVPVIGFIGRLEEQKGSDILVEAISKFMGLNVQMVI 435
Query: 754 LGS------SPVPHIQREFEGIADHFQNNNNIRLLLKYDDSLSHWIYAASDMFIVPSMFE 807
LG+ + + ++ +F G A + K++ L+H I A +D IVPS FE
Sbjct: 436 LGTGKKKMEAQILELEEKFPGKAVG---------VAKFNVPLAHMITAGADFIIVPSRFE 486
Query: 808 PCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPKELRNGFTFVHPDEK-ALSGAME 866
PCGL Q+ AMRYG+VPIV TGGL D+V D V PD+ A + A+
Sbjct: 487 PCGLIQLHAMRYGTVPIVASTGGLVDTVKDGYTGFHIGRFNVKCEVVDPDDVIATAKAVT 546
Query: 867 RAFNYYNRKPEVWKQLVQKDMRIDFSWASSASQYEDI 903
RA Y +++V+ M DFSW A +E +
Sbjct: 547 RAVAVYGT--SAMQEMVKNCMDQDFSWKGPARLWEKV 581
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.134 0.390
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 18,627,030
Number of extensions: 807192
Number of successful extensions: 2961
Number of sequences better than 1.0e-05: 15
Number of HSP's gapped: 2948
Number of HSP's successfully gapped: 18
Length of query: 915
Length of database: 11,106,569
Length adjustment: 108
Effective length of query: 807
Effective length of database: 8,145,641
Effective search space: 6573532287
Effective search space used: 6573532287
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 116 (49.3 bits)