BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0514300 Os05g0514300|AK061747
(372 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G53320.1 | chr1:19891237-19893429 REVERSE LENGTH=380 456 e-129
AT2G47900.3 | chr2:19611196-19612766 REVERSE LENGTH=408 352 2e-97
AT2G18280.1 | chr2:7946754-7948176 FORWARD LENGTH=395 327 5e-90
AT1G25280.1 | chr1:8864961-8866608 FORWARD LENGTH=446 327 8e-90
AT1G43640.1 | chr1:16439619-16441253 REVERSE LENGTH=430 319 2e-87
AT5G18680.1 | chr5:6228358-6230426 REVERSE LENGTH=390 314 5e-86
AT3G06380.1 | chr3:1936384-1938028 FORWARD LENGTH=381 311 4e-85
AT1G47270.1 | chr1:17326828-17328564 FORWARD LENGTH=414 311 4e-85
AT1G76900.1 | chr1:28882741-28884377 FORWARD LENGTH=456 233 1e-61
AT1G16070.2 | chr1:5511899-5513779 REVERSE LENGTH=399 62 6e-10
AT1G61940.1 | chr1:22897399-22898575 REVERSE LENGTH=245 59 5e-09
>AT1G53320.1 | chr1:19891237-19893429 REVERSE LENGTH=380
Length = 379
Score = 456 bits (1174), Expect = e-129, Method: Compositional matrix adjust.
Identities = 225/336 (66%), Positives = 252/336 (75%), Gaps = 15/336 (4%)
Query: 52 WSRLLPELLTEIMRRVDAGAERWPPRRDVVACACVCRRWRDAAVSVVRPPLECGRITFPS 111
WS +LPELL EI+RRV+ +RWP RRDVV CACV ++WR+ R L G+ITFPS
Sbjct: 44 WSAMLPELLGEIIRRVEETEDRWPQRRDVVTCACVSKKWREITHDFARSSLNSGKITFPS 103
Query: 112 SLKQPGPRDAPMHCFIRRNKKNSTFYLYLSLTQALTDKGKFLLAARRFRNGAHTEYIISY 171
LK PGPRD C I+RNKK STFYLYL+LT + TDKGKFLLAARRFR GA+TEYIIS
Sbjct: 104 CLKLPGPRDFSNQCLIKRNKKTSTFYLYLALTPSFTDKGKFLLAARRFRTGAYTEYIISL 163
Query: 172 DCDDLFPGSNSYVGKLRSDFLGTKFIIYDSQPPYDGAKPSRSQSSRRFASKQINPNVSGG 231
D DD GSN+YVGKLRSDFLGT F +YDSQPP++GAKPS ++SRRFASKQI+P V G
Sbjct: 164 DADDFSQGSNAYVGKLRSDFLGTNFTVYDSQPPHNGAKPSNGKASRRFASKQISPQVPAG 223
Query: 232 NYEVGQVSYKFNFLKSRGPRRMQCNIQC--------PVGQSTASDP------LKKLISTS 277
N+EVG VSYKFN LKSRGPRRM ++C G S+ P +KK
Sbjct: 224 NFEVGHVSYKFNLLKSRGPRRMVSTLRCPSPSPSSSSAGLSSDQKPCDVTKIMKKPNKDG 283
Query: 278 SPLA-LRNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVAPAGTSDPWGIADEETVILQF 336
S L L+NKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVA S P G DEETV+LQF
Sbjct: 284 SSLTILKNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVATVDQSQPSGKGDEETVLLQF 343
Query: 337 GKIEDDAFTMDYRQPLSAFQAFAICLTSFGTKLACE 372
GK+ DD FTMDYRQPLSAFQAFAICLTSFGTKLACE
Sbjct: 344 GKVGDDTFTMDYRQPLSAFQAFAICLTSFGTKLACE 379
>AT2G47900.3 | chr2:19611196-19612766 REVERSE LENGTH=408
Length = 407
Score = 352 bits (902), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 181/358 (50%), Positives = 233/358 (65%), Gaps = 39/358 (10%)
Query: 52 WSRLLPELLTEIMRRVDAGAERWPPRRDVVACACVCRRWRDAAVSVVRPPLECGRITFPS 111
W+ + PELL +++ R++ + WP R++VV+CA VCR WR+ +VR P ++TFP
Sbjct: 52 WASMPPELLRDVLMRIEQSEDTWPSRKNVVSCAGVCRNWREIVKEIVRVPELSSKLTFPI 111
Query: 112 SLKQPGPRDAPMHCFIRRNKKNSTFYLYLSLTQAL--TDKGKFLLAARRFRNGAHTEYII 169
SLKQPGPR + + C+I RN+ N T+YLYL L QA D GKFLLAA+RFR T+YII
Sbjct: 112 SLKQPGPRGSLVQCYIMRNRSNQTYYLYLGLNQAAASNDDGKFLLAAKRFRRPTCTDYII 171
Query: 170 SYDCDDLFPGSNSYVGKLRSDFLGTKFIIYDSQPPYDGAKPSRSQSSRRFASKQINPNVS 229
S +CDD+ GSN+Y+GKLRS+FLGTKF +YD+QP G + +R++SSR + KQ++P +
Sbjct: 172 SLNCDDVSRGSNTYIGKLRSNFLGTKFTVYDAQPTNPGTQVTRTRSSRLLSLKQVSPRIP 231
Query: 230 GGNYEVGQVSYKFNFLKSRGPRRMQCNIQC-------PVGQSTASDPL------------ 270
GNY V +SY+ N L SRGPRRMQC + P G + L
Sbjct: 232 SGNYPVAHISYELNVLGSRGPRRMQCVMDAIPASAVEPGGTAPTQTELVHSNLDSFPSFS 291
Query: 271 ----KKLISTSSP------------LALRNKAPRWHEHLQCWCLNFHGRVTVASVKNFQL 314
K + + S P L L+NKAPRWHE LQCWCLNF+GRVTVASVKNFQL
Sbjct: 292 FFRSKSIRAESLPSGPSSAAQKEGLLVLKNKAPRWHEQLQCWCLNFNGRVTVASVKNFQL 351
Query: 315 VAPAGTSDPWGIADEETVILQFGKIEDDAFTMDYRQPLSAFQAFAICLTSFGTKLACE 372
VA A + P G + E VILQFGK+ D FTMDY+ P+SAFQAF ICL+SF TK+ACE
Sbjct: 352 VA-APENGPAG-PEHENVILQFGKVGKDVFTMDYQYPISAFQAFTICLSSFDTKIACE 407
>AT2G18280.1 | chr2:7946754-7948176 FORWARD LENGTH=395
Length = 394
Score = 327 bits (839), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 168/349 (48%), Positives = 218/349 (62%), Gaps = 31/349 (8%)
Query: 52 WSRLLPELLTEIMRRVDAGAERWPPRRDVVACACVCRRWRDAAVSVVRPPLECGRITFPS 111
W+ L PELL +I+ RV+ WP R VV+CA VC+ WR + +VR P +CG++TFP
Sbjct: 48 WASLPPELLHDIIWRVEESETAWPARAAVVSCASVCKSWRGITMEIVRIPEQCGKLTFPI 107
Query: 112 SLKQPGPRDAPMHCFIRRNKKNSTFYLYLSLTQALTDKGKFLLAARRFRNGAHTEYIISY 171
SLKQPGPRD+P+ CFI+RN+ +T+ LY L + T+ K LLAARR R T++IIS
Sbjct: 108 SLKQPGPRDSPIQCFIKRNRATATYILYYGLMPSETENDKLLLAARRIRRATCTDFIISL 167
Query: 172 DCDDLFPGSNSYVGKLRSDFLGTKFIIYDSQPPYDGAKPSRSQSSRRFASKQINPNVSGG 231
+ S++YVGKLRS FLGTKF IYD+Q + +++Q +RR KQ P +
Sbjct: 168 SAKNFSRSSSTYVGKLRSGFLGTKFTIYDNQ---TASSTAQAQPNRRLHPKQAAPKLPTN 224
Query: 232 NYEVGQVSYKFNFLKSRGPRRMQCNIQCPVGQSTASDP-----LKKLISTS--------- 277
+ VG ++Y+ N L++RGPRRM C + S ++P +++ +S+S
Sbjct: 225 SSTVGNITYELNVLRTRGPRRMHCAMDSIPLSSVIAEPSVVQGIEEEVSSSPSPKGETIT 284
Query: 278 --------------SPLALRNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVAPAGTSDP 323
PL L+NK+PRWHE LQCWCLNF GRVTVASVKNFQLVA S
Sbjct: 285 TDKEIPDNSPSLRDQPLVLKNKSPRWHEQLQCWCLNFKGRVTVASVKNFQLVAEIDASLD 344
Query: 324 WGIADEETVILQFGKIEDDAFTMDYRQPLSAFQAFAICLTSFGTKLACE 372
+ E VILQFGKI D FTMDYR PLSAFQAFAIC++SF TK ACE
Sbjct: 345 APPEEHERVILQFGKIGKDIFTMDYRYPLSAFQAFAICISSFDTKPACE 393
>AT1G25280.1 | chr1:8864961-8866608 FORWARD LENGTH=446
Length = 445
Score = 327 bits (837), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 184/388 (47%), Positives = 233/388 (60%), Gaps = 66/388 (17%)
Query: 51 RWSRLLPELLTEIMRRVDAGAERWPPRRDVVACACVCRRWRDAAVSVVRPPLECGRITFP 110
RW+ L PELL ++++R++ WP R+ VVACA VCR WR +V P CG++TFP
Sbjct: 58 RWANLPPELLFDVIKRLEESESNWPARKHVVACASVCRSWRAMCQEIVLGPEICGKLTFP 117
Query: 111 SSLKQPGPRDAPMHCFIRRNKKNSTFYLYLSLTQA-LTDKGKFLLAARRFRNGAHTEYII 169
SLKQPGPRDA + CFI+R+K TF+L+L L+ A L + GKFLL+A+R R TEYII
Sbjct: 118 VSLKQPGPRDAMIQCFIKRDKSKLTFHLFLCLSPALLVENGKFLLSAKRTRRTTRTEYII 177
Query: 170 SYDCDDLFPGSNSYVGKLRSDFLGTKFIIYDSQPPYD---GAKPSRSQSSRRFASKQINP 226
S D D++ SNSY+GKLRS+FLGTKF++YD+QPP + A + S RF S++++P
Sbjct: 178 SMDADNISRSSNSYLGKLRSNFLGTKFLVYDTQPPPNTSSSALITDRTSRSRFHSRRVSP 237
Query: 227 NVSGGNYEVGQVSYKFNFLKSRGPRRMQCNIQ-CPV-----GQSTASDPLKKL------- 273
V G+Y + Q++Y+ N L +RGPRRM C + P+ G S + P K +
Sbjct: 238 KVPSGSYNIAQITYELNVLGTRGPRRMHCIMNSIPISSLEPGGSVPNQPEKLVPAPYSLD 297
Query: 274 --------ISTSS------------------------------PLALRNKAPRWHEHLQC 295
S SS PL L+NK PRWHE LQC
Sbjct: 298 DSFRSNISFSKSSFDHRSLDFSSSRFSEMGISCDDNEEEASFRPLILKNKQPRWHEQLQC 357
Query: 296 WCLNFHGRVTVASVKNFQLVA-----PAGTS------DPWGIADEETVILQFGKIEDDAF 344
WCLNF GRVTVASVKNFQLVA P GT +++ VILQFGK+ D F
Sbjct: 358 WCLNFRGRVTVASVKNFQLVAARQPQPQGTGAAAAPTSAPAHPEQDKVILQFGKVGKDMF 417
Query: 345 TMDYRQPLSAFQAFAICLTSFGTKLACE 372
TMDYR PLSAFQAFAICL+SF TKLACE
Sbjct: 418 TMDYRYPLSAFQAFAICLSSFDTKLACE 445
>AT1G43640.1 | chr1:16439619-16441253 REVERSE LENGTH=430
Length = 429
Score = 319 bits (817), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 169/379 (44%), Positives = 231/379 (60%), Gaps = 60/379 (15%)
Query: 51 RWSRLLPELLTEIMRRVDAGAERWPPRRDVVACACVCRRWRDAAVSVVRPPLECGRITFP 110
RW+ L LL ++M+++D WP R+ VVACA VC+ WR +V+ P G++TFP
Sbjct: 54 RWANLPAALLRDVMKKLDESESTWPARKQVVACAGVCKTWRLMCKDIVKSPEFSGKLTFP 113
Query: 111 SSLKQPGPRDAPMHCFIRRNKKNSTFYLYLSLTQA-LTDKGKFLLAARRFRNGAHTEYII 169
SLKQPGPRD + C+I+R+K N T++LYLSL+ A L + GKFLL+A+R R +TEY+I
Sbjct: 114 VSLKQPGPRDGIIQCYIKRDKSNMTYHLYLSLSPAILVESGKFLLSAKRSRRATYTEYVI 173
Query: 170 SYDCDDLFPGSNSYVGKLRSDFLGTKFIIYDSQPPYDGAK----PSRSQSSRRFASKQIN 225
S D D++ S++Y+GKL+S+FLGTKFI+YD+ P Y+ ++ P+RS+S F SK+++
Sbjct: 174 SMDADNISRSSSTYIGKLKSNFLGTKFIVYDTAPAYNSSQILSPPNRSRS---FNSKKVS 230
Query: 226 PNVSGGNYEVGQVSYKFNFLKSRGPRRMQC------NIQCPVGQSTASDP---------- 269
P V G+Y + QV+Y+ N L +RGPRRM C ++ G + S P
Sbjct: 231 PKVPSGSYNIAQVTYELNLLGTRGPRRMNCIMHSIPSLALEPGGTVPSQPEFLQRSLDES 290
Query: 270 -----LKKLISTSS-------------PLALRNKAPRWHEHLQCWCLNFHGRVTVASVKN 311
K+++ S PL L+ K PRW + L+CWCLNF GRVTVASVKN
Sbjct: 291 FRSIGSSKIVNHSGDFTRPKEEEGKVRPLVLKTKPPRWLQPLRCWCLNFKGRVTVASVKN 350
Query: 312 FQL-----VAPAGTSDPWGIA-------------DEETVILQFGKIEDDAFTMDYRQPLS 353
FQL V P SD +A + + +IL FGK+ D FTMDYR PLS
Sbjct: 351 FQLMSAATVQPGSGSDGGALATRPSLSPQQPEQSNHDKIILHFGKVGKDMFTMDYRYPLS 410
Query: 354 AFQAFAICLTSFGTKLACE 372
AFQAFAI L++F TKLACE
Sbjct: 411 AFQAFAISLSTFDTKLACE 429
>AT5G18680.1 | chr5:6228358-6230426 REVERSE LENGTH=390
Length = 389
Score = 314 bits (804), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 177/355 (49%), Positives = 222/355 (62%), Gaps = 36/355 (10%)
Query: 51 RWSRLLPELLTEIMRRVDAG-AERWPPRRDVVACACVCRRWRDAAVSVVRPPLECGRITF 109
RWS + ELL EI+ RV+A WP RR VVACA VCR WR V P ++TF
Sbjct: 38 RWSEIPEELLREILIRVEAADGGGWPSRRSVVACAGVCRGWRLLMNETVVVPEISSKLTF 97
Query: 110 PSSLKQPGPRDAPMHCFIRRNKKNSTFYLYLSLTQALTDKGKFLLAARRFRNGAHTEYII 169
P SLKQPGPRD+ + CFI+RN+ +++LYL LT +LTD GKFLLAA + ++ T+YII
Sbjct: 98 PISLKQPGPRDSLVQCFIKRNRITQSYHLYLGLTNSLTDDGKFLLAACKLKHTTCTDYII 157
Query: 170 SYDCDDLFPGSNSYVGKLRSDFLGTKFIIYDSQ-PPYDGAKPSRSQSSRRFASKQINPNV 228
S DD+ S +YVGK+RS+FLGTKF ++D P GA ++ + SR + +++ V
Sbjct: 158 SLRSDDMSRRSQAYVGKVRSNFLGTKFTVFDGNLLPSTGA--AKLRKSRSYNPAKVSAKV 215
Query: 229 SGGNYEVGQVSYKFNFLKSRGPRRMQCNIQC-PVG----QSTASDP-------------- 269
G+Y V ++Y+ N L SRGPR+MQC + P Q AS+P
Sbjct: 216 PLGSYPVAHITYELNVLGSRGPRKMQCLMDTIPTSTMEPQGVASEPSEFPLLGTRSTLSR 275
Query: 270 --LKKLISTSS-----PLALRNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVAPAGTSD 322
K L S+SS PL L NK PRWHE L+CWCLNFHGRVTVASVKNFQLVA AG S
Sbjct: 276 SQSKPLRSSSSHLKETPLVLSNKTPRWHEQLRCWCLNFHGRVTVASVKNFQLVA-AGASC 334
Query: 323 PWGIA-----DEETVILQFGKIEDDAFTMDYRQPLSAFQAFAICLTSFGTKLACE 372
G E +ILQFGK+ D FTMDY P+SAFQAFAICL+SF T++ACE
Sbjct: 335 GSGTGMSPERQSERIILQFGKVGKDMFTMDYGYPISAFQAFAICLSSFETRIACE 389
>AT3G06380.1 | chr3:1936384-1938028 FORWARD LENGTH=381
Length = 380
Score = 311 bits (796), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 171/356 (48%), Positives = 218/356 (61%), Gaps = 43/356 (12%)
Query: 52 WSRLLPELLTEIMRRVD-AGAERWPPRRDVVACACVCRRWRDAAVSVVRPPLECGRITFP 110
WS L ELL EI+ RV+ WP RR+VVACA VCR WR +V P ++TFP
Sbjct: 33 WSELPEELLREILIRVETVDGGDWPSRRNVVACAGVCRSWRILTKEIVAVPEFSSKLTFP 92
Query: 111 SSLKQPGPRDAPMHCFIRRNKKNSTFYLYLSLTQALTDKGKFLLAARRFRNGAHTEYIIS 170
SLKQ GPRD+ + CFI+RN+ +++LYL LT +LTD GKFLLAA + + T+YIIS
Sbjct: 93 ISLKQSGPRDSLVQCFIKRNRNTQSYHLYLGLTTSLTDNGKFLLAASKLKRATCTDYIIS 152
Query: 171 YDCDDLFPGSNSYVGKLRSDFLGTKFIIYDSQPPYDGAKPSRSQSSRRFASKQINPNVSG 230
DD+ SN+Y+G++RS+FLGTKF ++D AK +S+SS +++P V
Sbjct: 153 LRSDDISKRSNAYLGRMRSNFLGTKFTVFDGSQT-GAAKMQKSRSSNFI---KVSPRVPQ 208
Query: 231 GNYEVGQVSYKFNFLKSRGPRRMQCNIQC-------------------------PVGQST 265
G+Y + +SY+ N L SRGPRRM+C + PV +S
Sbjct: 209 GSYPIAHISYELNVLGSRGPRRMRCIMDTIPMSIVESRGVVASTSISSFSSRSSPVFRS- 267
Query: 266 ASDPLKKLISTSS---------PLALRNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVA 316
S PL+ ++ S PL L NKAPRWHE L+CWCLNFHGRVTVASVKNFQLVA
Sbjct: 268 HSKPLRSNSASCSDSGNNLGDPPLVLSNKAPRWHEQLRCWCLNFHGRVTVASVKNFQLVA 327
Query: 317 PAGTSDPWGIADEETVILQFGKIEDDAFTMDYRQPLSAFQAFAICLTSFGTKLACE 372
SD E +ILQFGK+ D FTMDY P+SAFQAFAICL+SF T++ACE
Sbjct: 328 ---VSDCEAGQTSERIILQFGKVGKDMFTMDYGYPISAFQAFAICLSSFETRIACE 380
>AT1G47270.1 | chr1:17326828-17328564 FORWARD LENGTH=414
Length = 413
Score = 311 bits (796), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 170/354 (48%), Positives = 217/354 (61%), Gaps = 42/354 (11%)
Query: 52 WSRLLPELLTEIMRRVDAGAERWPPRRDVVACACVCRRWRDAAVSVVRPPLECGRITFPS 111
W L PELL +I++R+++ WP RRDVVACA VC+ WR+ VV+ P G ITFP
Sbjct: 69 WVDLPPELLLDIIQRIESEQSLWPGRRDVVACASVCKSWREMTKEVVKVPELSGLITFPI 128
Query: 112 SLKQPGPRDAPMHCFIRRNKKNSTFYLYLSLTQALT-DKGKFLLAARRFRNGAHTEYIIS 170
SL+QPGPRDAP+ CFI+R + + LYL L+ AL+ DK K LL+A+R R E+++S
Sbjct: 129 SLRQPGPRDAPIQCFIKRERATGIYRLYLGLSPALSGDKSKLLLSAKRVRRATGAEFVVS 188
Query: 171 YDCDDLFPGSNSYVGKLRSDFLGTKFIIYDSQ-PPYDGAKPSRSQSSRRFASKQINPNV- 228
+D S++Y+GKLRS+FLGTKF +Y++Q PP++ P S Q++P V
Sbjct: 189 LSGNDFSRSSSNYIGKLRSNFLGTKFTVYENQPPPFNRKLP---------PSMQVSPWVS 239
Query: 229 -SGGNYEVGQVSYKFNFLKSRGPRRMQC--------------NIQCPVGQSTASDPLKKL 273
S +Y + + Y+ N L++RGPRRMQC IQ P + KK
Sbjct: 240 SSSSSYNIASILYELNVLRTRGPRRMQCIMHSIPISAIQEGGKIQSPTEFTNQGKKKKKP 299
Query: 274 IS------------TSSPLALRNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVAPAGTS 321
+ PL L+NK+PRWHE LQCWCLNF GRVTVASVKNFQLVA A +
Sbjct: 300 LMDFCSGNLGGESVIKEPLILKNKSPRWHEQLQCWCLNFKGRVTVASVKNFQLVAAAAEA 359
Query: 322 DP-WGIADEET--VILQFGKIEDDAFTMDYRQPLSAFQAFAICLTSFGTKLACE 372
I +EE VILQFGKI D FTMDYR P+SAFQAFAICL+SF TK CE
Sbjct: 360 GKNMNIPEEEQDRVILQFGKIGKDIFTMDYRYPISAFQAFAICLSSFDTKPVCE 413
>AT1G76900.1 | chr1:28882741-28884377 FORWARD LENGTH=456
Length = 455
Score = 233 bits (594), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 113/219 (51%), Positives = 149/219 (68%), Gaps = 4/219 (1%)
Query: 52 WSRLLPELLTEIMRRVDAGAERWPPRRDVVACACVCRRWRDAAVSVVRPPLECGRITFPS 111
W+ L PELL ++++R++ WP RR VVACA VCR WRD +V+ P G+ITFP
Sbjct: 57 WANLPPELLRDVIKRLEESESVWPARRHVVACASVCRSWRDMCKEIVQSPELSGKITFPV 116
Query: 112 SLKQPGPRDAPMHCFIRRNKKNSTFYLYLSLTQA-LTDKGKFLLAARRFRNGAHTEYIIS 170
SLKQPGPRDA M CFI+R+K N T++LYL L+ A L + GKFLL+A+R R +TEY+IS
Sbjct: 117 SLKQPGPRDATMQCFIKRDKSNLTYHLYLCLSPALLVENGKFLLSAKRIRRTTYTEYVIS 176
Query: 171 YDCDDLFPGSNSYVGKLRSDFLGTKFIIYDSQPPYDGAKPSRSQS---SRRFASKQINPN 227
D + SN+Y+GK+RS+FLGTKFIIYD+QP Y+ Q SRRF SK+++P
Sbjct: 177 MHADTISRSSNTYIGKIRSNFLGTKFIIYDTQPAYNSNIARAVQPVGLSRRFYSKRVSPK 236
Query: 228 VSGGNYEVGQVSYKFNFLKSRGPRRMQCNIQCPVGQSTA 266
V G+Y++ QVSY+ N L +RGPRRM C + S A
Sbjct: 237 VPSGSYKIAQVSYELNVLGTRGPRRMHCAMNSIPASSLA 275
Score = 131 bits (330), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 67/118 (56%), Positives = 76/118 (64%), Gaps = 26/118 (22%)
Query: 276 TSSPLALRNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVAP------------------ 317
S PL L+NK PRWHE LQCWCLNF GRVTVASVKNFQL+A
Sbjct: 343 NSPPLVLKNKPPRWHEQLQCWCLNFRGRVTVASVKNFQLIAANQPQPQPQPQPQPQPLTQ 402
Query: 318 ---AGTSDPWGIADEETVILQFGKIEDDAFTMDYRQPLSAFQAFAICLTSFGTKLACE 372
+G +D + +ILQFGK+ D FTMD+R PLSAFQAFAICL+SF TKLACE
Sbjct: 403 PQPSGQTD-----GPDKIILQFGKVGKDMFTMDFRYPLSAFQAFAICLSSFDTKLACE 455
>AT1G16070.2 | chr1:5511899-5513779 REVERSE LENGTH=399
Length = 398
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 113/248 (45%), Gaps = 33/248 (13%)
Query: 134 STFYLYLSLTQALTDKGKFLLAARRFRNGAHTEYIISYDCDDLFPGSN-SYVGKLRSDFL 192
S + LY + D+ K +A RNG + ++ + L S+ SYVG + ++ L
Sbjct: 172 SVYSLYTHEGRGRKDR-KLAVAYHSRRNGKSI-FRVAQNVKGLLCSSDESYVGSMTANLL 229
Query: 193 GTKFIIYDSQPPYDGAKPSRSQSSRRFASKQINPNVSGGNYEVGQVSYKFNFLKSRG--P 250
G+K+ I+D K R S K + P +S + ++ ++ + R P
Sbjct: 230 GSKYYIWD--------KGVRVGS----VGKMVKPLLSVVIFTPTITTWTGSYRRMRTLLP 277
Query: 251 RR--MQCNIQCPVGQSTASDPLKKLISTSSPLALRNKAPRWHEHLQCWCLNFH--GRVTV 306
++ MQ N V Q++ PL L + L ++ P +++ + L+F GR +
Sbjct: 278 KQQPMQKNNNKQVQQASKL-PLDWLENKEKIQKLCSRIPHYNKISKQHELDFRDRGRTGL 336
Query: 307 ---ASVKNFQLVAPAGTSDPWGIADEETVILQFGKIEDDAFTMDYRQPLSAFQAFAICLT 363
+SVKNFQL T ILQ G+++ + +D+R P S +QAF ICL
Sbjct: 337 RIQSSVKNFQLTLTQET--------PRQTILQMGRVDKARYVIDFRYPFSGYQAFCICLA 388
Query: 364 SFGTKLAC 371
S +KL C
Sbjct: 389 SIDSKLCC 396
>AT1G61940.1 | chr1:22897399-22898575 REVERSE LENGTH=245
Length = 244
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%)
Query: 57 PELLTEIMRRVDAGAERWPPRRDVVACACVCRRWRDAAVSVVRPPLECGRITFPSSLKQ 115
PELL +++ R++ + WP R++VV+C VC+ WR +V P + TFP SLKQ
Sbjct: 3 PELLRDVLMRIERSEDTWPSRKNVVSCVGVCKNWRQIFKEIVNVPEVSSKFTFPISLKQ 61
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.323 0.136 0.439
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,610,761
Number of extensions: 318030
Number of successful extensions: 710
Number of sequences better than 1.0e-05: 11
Number of HSP's gapped: 684
Number of HSP's successfully gapped: 15
Length of query: 372
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 272
Effective length of database: 8,364,969
Effective search space: 2275271568
Effective search space used: 2275271568
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 112 (47.8 bits)