BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os05g0511500 Os05g0511500|AK101807
         (384 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G08415.1  | chr5:2710983-2713101 REVERSE LENGTH=395            460   e-130
AT2G20860.1  | chr2:8979636-8980983 FORWARD LENGTH=375            318   3e-87

>AT5G08415.1 | chr5:2710983-2713101 REVERSE LENGTH=395
          Length = 394

 Score =  460 bits (1184), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 240/397 (60%), Positives = 281/397 (70%), Gaps = 42/397 (10%)

Query: 8   VYHHHPVSPSTMQGSLARPSIHAGSA---SLTFRARPNSVSIVRCDADSPPEGSAVA--- 61
           + HH  ++  T   S++   +H  S+   +L FR R  S      D  SP    AV+   
Sbjct: 1   MMHHCSITKPTFSISISTQKLHHHSSKFLNLGFRIRCES-----GDVSSPLRTKAVSLSS 55

Query: 62  -------------------------GWAPPGPYTGRDPAARKPAWLRQRAAQGEKYARLR 96
                                    G    GP+TGRDP  +KPAWLRQ+A QGE++  ++
Sbjct: 56  EMEDSSSLKKSLMELEGKKSEPYPGGMPKMGPFTGRDPNVKKPAWLRQKAPQGERFQEVK 115

Query: 97  ESLGELKLNTVCVEAQCPNIGECWXXXXXXXXXXXXXXXXXXMLLGDTCTRGCRFCAVKT 156
           ESL  L LNTVC EAQCPNIGECW                  M+LGDTCTRGCRFCAVKT
Sbjct: 116 ESLSRLNLNTVCEEAQCPNIGECWNGGGDGVATATI------MVLGDTCTRGCRFCAVKT 169

Query: 157 SNKPPPPDALEPLRTAVAVASWGVDYVVLTSVDRDDLPDGGSGHFAQTVKALKELKPGIL 216
           S  PPPPD +EP  TA A+ASWGVDY+V+TSVDRDD+PDGGSGHFAQTVKA+K  KP I+
Sbjct: 170 SRNPPPPDPMEPENTAKAIASWGVDYIVITSVDRDDIPDGGSGHFAQTVKAMKRHKPDIM 229

Query: 217 VECLTSDFRGDLEAVSSLASSGLDVFAHNIETVRSLQRIVRDPRAAYDQSLAVLKHAKNC 276
           +ECLTSDFRGDLEAV +L  SGLDVFAHN+ETV+ LQR+VRDPRA Y+QS++VLKHAK  
Sbjct: 230 IECLTSDFRGDLEAVDTLVHSGLDVFAHNVETVKRLQRLVRDPRAGYEQSMSVLKHAKIS 289

Query: 277 KDGMVTKSSIMLGLGETDEEVKQTMCDLRAIDVDILTLGQYLQPTERHLRVREYVTPEKF 336
           K GM+TK+SIMLGLGETDEE+K+ M DLRAIDVDILTLGQYLQPT  HL V+EYVTPEKF
Sbjct: 290 KPGMITKTSIMLGLGETDEELKEAMADLRAIDVDILTLGQYLQPTPLHLTVKEYVTPEKF 349

Query: 337 DFWKEYGESLGFLYVASGPLVRSSYRAGELFVQNLVR 373
           DFWK YGES+GF YVASGPLVRSSYRAGELFV+ +V+
Sbjct: 350 DFWKTYGESIGFRYVASGPLVRSSYRAGELFVKTMVK 386



>AT2G20860.1 | chr2:8979636-8980983 FORWARD LENGTH=375
          Length = 374

 Score =  318 bits (815), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 161/293 (54%), Positives = 211/293 (72%), Gaps = 7/293 (2%)

Query: 81  WLRQRAAQGEKYARLRESLGELKLNTVCVEAQCPNIGECWXXXXXXXXXXXXXXXXXXML 140
           W+++    GE+Y ++++ L +LKL+TVC EA+CPN+GECW                  M+
Sbjct: 76  WMKESIPGGERYVQIKKKLRDLKLHTVCEEAKCPNLGECWSGGETGTATATI------MI 129

Query: 141 LGDTCTRGCRFCAVKTSNKPPPPDALEPLRTAVAVASWGVDYVVLTSVDRDDLPDGGSGH 200
           LGDTCTRGCRFC VKTS  PPPPD  EP   A A+ASWGVDYVV+TSVDRDDLPD GSGH
Sbjct: 130 LGDTCTRGCRFCNVKTSRTPPPPDPNEPNNVAEAIASWGVDYVVITSVDRDDLPDQGSGH 189

Query: 201 FAQTVKALKELKPGILVECLTSDFRGDLEAVSSLASSGLDVFAHNIETVRSLQRIVRDPR 260
           FA+TV+ LK LKP +L+E L  DFRGD   V  ++ SGLDV AHNIETV  LQ  VRD R
Sbjct: 190 FAETVQRLKFLKPEMLIEALVPDFRGDGGCVEKVSKSGLDVLAHNIETVEELQSFVRDHR 249

Query: 261 AAYDQSLAVLKHAKN-CKDGMVTKSSIMLGLGETDEEVKQTMCDLRAIDVDILTLGQYLQ 319
           A + QSL VL+ AK     G +TK+S+MLG GET ++V +TM  +RA  VD++T GQY++
Sbjct: 250 ANFKQSLDVLRMAKEYAPAGTLTKTSVMLGCGETPDQVVKTMEKVRAAGVDVMTFGQYMR 309

Query: 320 PTERHLRVREYVTPEKFDFWKEYGESLGFLYVASGPLVRSSYRAGELFVQNLV 372
           P++RH+ V EYVTP+ F+ ++  G  +GF YVASGP+VRSSY+AGE ++++++
Sbjct: 310 PSKRHMPVAEYVTPDAFERYRLLGMEMGFRYVASGPMVRSSYKAGEYYIKSMI 362



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.318    0.134    0.408 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,189,260
Number of extensions: 326345
Number of successful extensions: 880
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 878
Number of HSP's successfully gapped: 2
Length of query: 384
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 284
Effective length of database: 8,364,969
Effective search space: 2375651196
Effective search space used: 2375651196
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 113 (48.1 bits)