BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os05g0507000 Os05g0507000|AK108025
         (166 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G36710.1  | chr5:14425491-14426042 REVERSE LENGTH=184           78   2e-15
AT5G36800.1  | chr5:14484791-14485342 REVERSE LENGTH=184           78   2e-15
AT5G16250.1  | chr5:5310264-5310815 REVERSE LENGTH=184             64   5e-11
AT3G02640.1  | chr3:565064-565621 REVERSE LENGTH=186               49   1e-06

>AT5G36710.1 | chr5:14425491-14426042 REVERSE LENGTH=184
          Length = 183

 Score = 77.8 bits (190), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 49/129 (37%), Positives = 55/129 (42%), Gaps = 2/129 (1%)

Query: 5   HTHRAFLLCNYLLLGAASGCIFLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXCXXXXXXX 64
           +TH  FLLCNY+LLG+AS CIFLT                            C       
Sbjct: 9   NTHNIFLLCNYILLGSASSCIFLTISLRLFPSLSGLSLIFLYTLTIATAVSGCSIFASST 68

Query: 65  XXXXXXXX--XXXXXXVLTAIFQGAAALLAFTRTGDFLAELRSYVREEDXXXXXXXXXXX 122
                           VLTAIFQGA ++L FTRTGDFL  L+SYVREED           
Sbjct: 69  SATASDRLYGSHMVATVLTAIFQGAVSVLIFTRTGDFLRFLKSYVREEDGEVILKLSGGL 128

Query: 123 XXXXFVLEW 131
               F LEW
Sbjct: 129 CVLMFCLEW 137



>AT5G36800.1 | chr5:14484791-14485342 REVERSE LENGTH=184
          Length = 183

 Score = 77.8 bits (190), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 49/129 (37%), Positives = 55/129 (42%), Gaps = 2/129 (1%)

Query: 5   HTHRAFLLCNYLLLGAASGCIFLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXCXXXXXXX 64
           +TH  FLLCNY+LLG+AS CIFLT                            C       
Sbjct: 9   NTHNIFLLCNYILLGSASSCIFLTISLRLFPSLSGLSLIFLYTLTIATAVSGCSIFASST 68

Query: 65  XXXXXXXX--XXXXXXVLTAIFQGAAALLAFTRTGDFLAELRSYVREEDXXXXXXXXXXX 122
                           VLTAIFQGA ++L FTRTGDFL  L+SYVREED           
Sbjct: 69  SATASDRLYGSHMVATVLTAIFQGAVSVLIFTRTGDFLRFLKSYVREEDGEVILKLSGGL 128

Query: 123 XXXXFVLEW 131
               F LEW
Sbjct: 129 CVLMFCLEW 137



>AT5G16250.1 | chr5:5310264-5310815 REVERSE LENGTH=184
          Length = 183

 Score = 63.5 bits (153), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 50/127 (39%), Gaps = 3/127 (2%)

Query: 5   HTHRAFLLCNYLLLGAASGCIFLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXCXXXXXXX 64
           HTH+ FL  NY+LLGAAS CIFLT                                    
Sbjct: 16  HTHKIFLFSNYILLGAASSCIFLTLSLRLIPSICGFLLILLHATTIAAAVSG---CAAAS 72

Query: 65  XXXXXXXXXXXXXXVLTAIFQGAAALLAFTRTGDFLAELRSYVREEDXXXXXXXXXXXXX 124
                         VLTAIFQG+ ++L FT T  FL  L+SYVREED             
Sbjct: 73  CGRNRWYAAHMVATVLTAIFQGSVSVLIFTNTSKFLGSLKSYVREEDAAVILKLGGGLCI 132

Query: 125 XXFVLEW 131
             F L+W
Sbjct: 133 VIFCLDW 139



>AT3G02640.1 | chr3:565064-565621 REVERSE LENGTH=186
          Length = 185

 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 24/53 (45%), Positives = 30/53 (56%)

Query: 79  VLTAIFQGAAALLAFTRTGDFLAELRSYVREEDXXXXXXXXXXXXXXXFVLEW 131
           VLTAIFQG+ ++L FT T +FL  L SYVRE++               F LEW
Sbjct: 88  VLTAIFQGSVSVLIFTNTSNFLESLNSYVREKEASMILKLAGGLCVVIFCLEW 140



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.331    0.140    0.454 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 1,448,582
Number of extensions: 19192
Number of successful extensions: 51
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 51
Number of HSP's successfully gapped: 4
Length of query: 166
Length of database: 11,106,569
Length adjustment: 91
Effective length of query: 75
Effective length of database: 8,611,713
Effective search space: 645878475
Effective search space used: 645878475
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 108 (46.2 bits)