BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0506800 Os05g0506800|J065158N07
(95 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G28590.1 | chr1:10047509-10049300 REVERSE LENGTH=404 81 1e-16
AT1G31550.2 | chr1:11295635-11297284 REVERSE LENGTH=395 80 2e-16
AT1G28600.1 | chr1:10051228-10053073 REVERSE LENGTH=394 79 4e-16
AT2G27360.1 | chr2:11706233-11707905 FORWARD LENGTH=395 76 4e-15
AT1G28580.1 | chr1:10044603-10046379 REVERSE LENGTH=391 74 1e-14
AT1G28610.2 | chr1:10053877-10055665 REVERSE LENGTH=384 73 4e-14
AT1G28660.1 | chr1:10071856-10073371 REVERSE LENGTH=384 71 1e-13
AT1G28670.1 | chr1:10074669-10076250 REVERSE LENGTH=385 69 5e-13
AT1G28570.1 | chr1:10041838-10044112 REVERSE LENGTH=390 67 1e-12
AT1G56670.1 | chr1:21241688-21243965 FORWARD LENGTH=374 67 2e-12
AT1G28650.1 | chr1:10069547-10071082 REVERSE LENGTH=386 66 4e-12
AT3G48460.1 | chr3:17949496-17951082 FORWARD LENGTH=382 65 6e-12
AT1G28640.1 | chr1:10067563-10069109 REVERSE LENGTH=390 65 7e-12
AT3G62280.1 | chr3:23049484-23051116 REVERSE LENGTH=366 65 7e-12
AT1G54790.2 | chr1:20441124-20443997 REVERSE LENGTH=409 65 1e-11
AT1G09390.1 | chr1:3031264-3033415 FORWARD LENGTH=371 60 3e-10
AT5G45910.1 | chr5:18620420-18622264 REVERSE LENGTH=373 59 7e-10
AT5G03980.1 | chr5:1074205-1075289 REVERSE LENGTH=324 57 2e-09
AT3G26430.1 | chr3:9674419-9675889 FORWARD LENGTH=381 57 3e-09
AT1G67830.1 | chr1:25431705-25432972 REVERSE LENGTH=373 55 1e-08
AT3G05180.1 | chr3:1468599-1470529 REVERSE LENGTH=380 54 2e-08
AT4G01130.1 | chr4:485868-488007 FORWARD LENGTH=383 54 2e-08
AT5G14450.1 | chr5:4658488-4660034 FORWARD LENGTH=390 53 3e-08
>AT1G28590.1 | chr1:10047509-10049300 REVERSE LENGTH=404
Length = 403
Score = 80.9 bits (198), Expect = 1e-16, Method: Composition-based stats.
Identities = 35/62 (56%), Positives = 42/62 (67%)
Query: 25 LKACCGTGGTYNFNVSSACALPGVVACKDPSASISWDGIHYTEAINRFVAKGWLYGPYAD 84
L ACCG GG+YNFN S C GV C DPS +++DGIH TEA R +++G L GPYA
Sbjct: 310 LPACCGVGGSYNFNFSRRCGSVGVEYCDDPSQYVNYDGIHMTEAAYRLISEGLLKGPYAI 369
Query: 85 PP 86
PP
Sbjct: 370 PP 371
>AT1G31550.2 | chr1:11295635-11297284 REVERSE LENGTH=395
Length = 394
Score = 80.1 bits (196), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 44/63 (69%)
Query: 25 LKACCGTGGTYNFNVSSACALPGVVACKDPSASISWDGIHYTEAINRFVAKGWLYGPYAD 84
L ACCG GG YNFN+S +C GV AC DPS ++WDG+H TEA ++ +A G + GPYA
Sbjct: 309 LSACCGVGGPYNFNLSRSCGSVGVEACSDPSKYVAWDGLHMTEAAHKSMADGLVKGPYAI 368
Query: 85 PPI 87
PP
Sbjct: 369 PPF 371
>AT1G28600.1 | chr1:10051228-10053073 REVERSE LENGTH=394
Length = 393
Score = 79.3 bits (194), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 42/61 (68%)
Query: 27 ACCGTGGTYNFNVSSACALPGVVACKDPSASISWDGIHYTEAINRFVAKGWLYGPYADPP 86
ACCG GG YNFN + C GV +CKDPS + WDG+H TEA +++A G L GPYA+PP
Sbjct: 306 ACCGIGGPYNFNFTRKCGSVGVKSCKDPSKYVGWDGVHMTEAAYKWIADGILNGPYANPP 365
Query: 87 I 87
Sbjct: 366 F 366
>AT2G27360.1 | chr2:11706233-11707905 FORWARD LENGTH=395
Length = 394
Score = 75.9 bits (185), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 42/66 (63%)
Query: 22 DGLLKACCGTGGTYNFNVSSACALPGVVACKDPSASISWDGIHYTEAINRFVAKGWLYGP 81
D L ACCG GG YNF S C GV C DPS ++WDGIH TEA +++++G L GP
Sbjct: 305 DRPLPACCGLGGPYNFTFSIKCGSKGVEYCSDPSKYVNWDGIHMTEAAYKWISEGVLTGP 364
Query: 82 YADPPI 87
YA PP
Sbjct: 365 YAIPPF 370
>AT1G28580.1 | chr1:10044603-10046379 REVERSE LENGTH=391
Length = 390
Score = 74.3 bits (181), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 40/63 (63%)
Query: 25 LKACCGTGGTYNFNVSSACALPGVVACKDPSASISWDGIHYTEAINRFVAKGWLYGPYAD 84
L ACCG GG YN+ V C V +C DPS ++WDG+H TEA R +A+G L GPYA
Sbjct: 311 LSACCGAGGPYNYTVGRKCGTDIVESCDDPSKYVAWDGVHMTEAAYRLMAEGILNGPYAI 370
Query: 85 PPI 87
PP
Sbjct: 371 PPF 373
>AT1G28610.2 | chr1:10053877-10055665 REVERSE LENGTH=384
Length = 383
Score = 72.8 bits (177), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 40/64 (62%)
Query: 22 DGLLKACCGTGGTYNFNVSSACALPGVVACKDPSASISWDGIHYTEAINRFVAKGWLYGP 81
D L ACCG GG YNF +S C GV C DPS ++WDG+H TEA +++A G L GP
Sbjct: 301 DRPLPACCGLGGPYNFTLSKKCGSVGVKYCSDPSKYVNWDGVHMTEAAYKWIADGLLKGP 360
Query: 82 YADP 85
Y P
Sbjct: 361 YTIP 364
>AT1G28660.1 | chr1:10071856-10073371 REVERSE LENGTH=384
Length = 383
Score = 70.9 bits (172), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 39/61 (63%)
Query: 25 LKACCGTGGTYNFNVSSACALPGVVACKDPSASISWDGIHYTEAINRFVAKGWLYGPYAD 84
L ACCG GG YNF + C GV C++PS ++WDG H TEA + +A+G L GPYA
Sbjct: 309 LAACCGVGGKYNFTIGKECGYEGVSYCQNPSEYVNWDGYHLTEAAYQKMAEGILNGPYAT 368
Query: 85 P 85
P
Sbjct: 369 P 369
>AT1G28670.1 | chr1:10074669-10076250 REVERSE LENGTH=385
Length = 384
Score = 68.9 bits (167), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 38/61 (62%)
Query: 25 LKACCGTGGTYNFNVSSACALPGVVACKDPSASISWDGIHYTEAINRFVAKGWLYGPYAD 84
L ACCG GG YNF + C GV C++PS ++WDG H TEA + + +G L GPYA
Sbjct: 310 LAACCGVGGKYNFTIGKECGYEGVNYCQNPSEYVNWDGYHLTEAAYQKMTEGILNGPYAT 369
Query: 85 P 85
P
Sbjct: 370 P 370
>AT1G28570.1 | chr1:10041838-10044112 REVERSE LENGTH=390
Length = 389
Score = 67.4 bits (163), Expect = 1e-12, Method: Composition-based stats.
Identities = 30/62 (48%), Positives = 36/62 (58%)
Query: 25 LKACCGTGGTYNFNVSSACALPGVVACKDPSASISWDGIHYTEAINRFVAKGWLYGPYAD 84
L ACC GG +NF + C DPS +SWDG+H TEA R +A+G L GPYA
Sbjct: 308 LPACCALGGPFNFTLGRKRGTQVPECCDDPSKYVSWDGVHMTEAAYRLMAEGILKGPYAI 367
Query: 85 PP 86
PP
Sbjct: 368 PP 369
>AT1G56670.1 | chr1:21241688-21243965 FORWARD LENGTH=374
Length = 373
Score = 67.0 bits (162), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Query: 11 ICNINYSGFASDGLLKACCGTGGT-YNFNVSSACALPGVVACKDPSASISWDGIHYTEAI 69
I N N GF S L ACCG GGT YN+NV C G C++ S ISWDGIHYTE
Sbjct: 290 IANSNQYGFKSP--LMACCGYGGTPYNYNVKITCGHKGSNVCEEGSRFISWDGIHYTETA 347
Query: 70 NRFVAKGWLYGPYADPP 86
N VA L Y+ PP
Sbjct: 348 NAIVAMKVLSMHYSKPP 364
>AT1G28650.1 | chr1:10069547-10071082 REVERSE LENGTH=386
Length = 385
Score = 65.9 bits (159), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 37/61 (60%)
Query: 25 LKACCGTGGTYNFNVSSACALPGVVACKDPSASISWDGIHYTEAINRFVAKGWLYGPYAD 84
L ACCG GG YNF + C GV C++PS ++WDG H TEA + +A+G L G Y
Sbjct: 311 LAACCGVGGQYNFTIGKECGENGVSYCQNPSEYVNWDGYHLTEATYQKMAQGLLNGRYTT 370
Query: 85 P 85
P
Sbjct: 371 P 371
>AT3G48460.1 | chr3:17949496-17951082 FORWARD LENGTH=382
Length = 381
Score = 65.5 bits (158), Expect = 6e-12, Method: Composition-based stats.
Identities = 27/61 (44%), Positives = 35/61 (57%)
Query: 25 LKACCGTGGTYNFNVSSACALPGVVACKDPSASISWDGIHYTEAINRFVAKGWLYGPYAD 84
KACCG G YNF V C CKDP+ I+WDG+H TEA+ + +A +L G +
Sbjct: 308 FKACCGIGEPYNFQVFQTCGTDAATVCKDPNQYINWDGVHLTEAMYKVMADMFLDGTFTR 367
Query: 85 P 85
P
Sbjct: 368 P 368
>AT1G28640.1 | chr1:10067563-10069109 REVERSE LENGTH=390
Length = 389
Score = 65.1 bits (157), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 38/61 (62%)
Query: 25 LKACCGTGGTYNFNVSSACALPGVVACKDPSASISWDGIHYTEAINRFVAKGWLYGPYAD 84
L ACCG GG YNF + C GV C++PS ++WDG H TEA ++ +A+ L G YA
Sbjct: 309 LAACCGVGGQYNFTIGKECGHRGVSCCQNPSEYVNWDGYHLTEATHQKMAQVILNGTYAS 368
Query: 85 P 85
P
Sbjct: 369 P 369
>AT3G62280.1 | chr3:23049484-23051116 REVERSE LENGTH=366
Length = 365
Score = 65.1 bits (157), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 49/91 (53%), Gaps = 7/91 (7%)
Query: 2 SDRSLICLNICNINYSGFASDGL------LKACCGTGGT-YNFNVSSACALPGVVACKDP 54
D +L+ ++I +I Y A L L ACCG GG N++ + C PG C+D
Sbjct: 267 KDATLVYVDIYSIKYKLSADFKLYGFVDPLMACCGYGGRPNNYDRKATCGQPGSTICRDV 326
Query: 55 SASISWDGIHYTEAINRFVAKGWLYGPYADP 85
+ +I WDG+HYTEA NRFV L Y+ P
Sbjct: 327 TKAIVWDGVHYTEAANRFVVDAVLTNRYSYP 357
>AT1G54790.2 | chr1:20441124-20443997 REVERSE LENGTH=409
Length = 408
Score = 64.7 bits (156), Expect = 1e-11, Method: Composition-based stats.
Identities = 36/82 (43%), Positives = 43/82 (52%), Gaps = 11/82 (13%)
Query: 14 INYSGFASDGLLKACCGTGGT-YNFNVSSACALPGVV--------ACKDPSASISWDGIH 64
+N GF L ACCG GG N++ C V+ AC D S I+WDGIH
Sbjct: 316 LNVLGFEKP--LMACCGVGGAPLNYDSRITCGQTKVLDGISVTAKACNDSSEYINWDGIH 373
Query: 65 YTEAINRFVAKGWLYGPYADPP 86
YTEA N FV+ L G Y+DPP
Sbjct: 374 YTEAANEFVSSQILTGKYSDPP 395
>AT1G09390.1 | chr1:3031264-3033415 FORWARD LENGTH=371
Length = 370
Score = 60.1 bits (144), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 11 ICNINYSGFASDGLLKACCGTGGT-YNFNVSSACALPGVVACKDPSASISWDGIHYTEAI 69
I N N GF L ACCG GG YN+NV+ C G +C + S ISWDGIHYTE
Sbjct: 287 IANSNNYGFEKP--LMACCGYGGPPYNYNVNITCGNGGSKSCDEGSRFISWDGIHYTETA 344
Query: 70 NRFVAKGWLYGPYADPP 86
N VA L ++ PP
Sbjct: 345 NAIVAMKVLSMQHSTPP 361
>AT5G45910.1 | chr5:18620420-18622264 REVERSE LENGTH=373
Length = 372
Score = 58.5 bits (140), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 24 LLKACCGTG-GTYNFNVSSACALPGVVACKDPSASISWDGIHYTEAINRFVAKGWLYGPY 82
+LKACCG G G YN + C G C+DPS +WDGIH TEA R +A G + G +
Sbjct: 307 VLKACCGGGDGRYNVQPNVRCGEKGSTTCEDPSTYANWDGIHLTEAAYRHIATGLISGRF 366
Query: 83 ADP 85
P
Sbjct: 367 TMP 369
>AT5G03980.1 | chr5:1074205-1075289 REVERSE LENGTH=324
Length = 323
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 33/51 (64%)
Query: 25 LKACCGTGGTYNFNVSSACALPGVVACKDPSASISWDGIHYTEAINRFVAK 75
LK+CCGTGG YN++ GV C++P ISWDG+H T+ RF++K
Sbjct: 258 LKSCCGTGGAYNYDGKRPYGAVGVPVCQNPHKFISWDGVHLTQKAYRFMSK 308
>AT3G26430.1 | chr3:9674419-9675889 FORWARD LENGTH=381
Length = 380
Score = 56.6 bits (135), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 25 LKACCGTGGTYNFNVSSACALPGVV---------ACKDPSASISWDGIHYTEAINRFVAK 75
L ACCG GG YNFN C ++ +C D S +SWDGIH+TE N ++ +
Sbjct: 301 LVACCGHGGKYNFNKLIKCGAKVMIKGKEIVLAKSCNDVSFRVSWDGIHFTETTNSWIFQ 360
Query: 76 GWLYGPYADPPI 87
G ++DPP+
Sbjct: 361 QINDGAFSDPPL 372
>AT1G67830.1 | chr1:25431705-25432972 REVERSE LENGTH=373
Length = 372
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 9/69 (13%)
Query: 14 INYSGFASDGLLKACCGTGGTYNFNVSSACALPGVVA---------CKDPSASISWDGIH 64
++ G G L +CCG GG YN+N C + +V C +P ++ WDG+H
Sbjct: 289 VHAQGHGFKGSLVSCCGHGGKYNYNKGIGCGMKKIVKGKEVYIGKPCDEPDKAVVWDGVH 348
Query: 65 YTEAINRFV 73
+T+A N+F+
Sbjct: 349 FTQAANKFI 357
>AT3G05180.1 | chr3:1468599-1470529 REVERSE LENGTH=380
Length = 379
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 9/80 (11%)
Query: 14 INYSGFASDGLLKACCGTGGT-YNFNVSSAC--------ALPGVVACKDPSASISWDGIH 64
+N+S + D + CCGTGG N++ C + C D S ++WDGIH
Sbjct: 293 LNHSKYGFDHSIMVCCGTGGPPLNYDDQVGCGKTARSNGTIITAKPCYDSSKYVNWDGIH 352
Query: 65 YTEAINRFVAKGWLYGPYAD 84
YTEA NRFVA L G Y++
Sbjct: 353 YTEAANRFVALHILTGKYSE 372
>AT4G01130.1 | chr4:485868-488007 FORWARD LENGTH=383
Length = 382
Score = 53.5 bits (127), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 38/73 (52%), Gaps = 9/73 (12%)
Query: 25 LKACCGTGGT-YNFNVSSACALPGVV--------ACKDPSASISWDGIHYTEAINRFVAK 75
+KACCG GG YNFN C V+ AC DP +SWDGIH TEA N ++
Sbjct: 303 IKACCGYGGRPYNFNQKLFCGNTKVIGNFSTTAKACHDPHNYVSWDGIHATEAANHHISM 362
Query: 76 GWLYGPYADPPIL 88
L G + PP +
Sbjct: 363 AILDGSISYPPFI 375
>AT5G14450.1 | chr5:4658488-4660034 FORWARD LENGTH=390
Length = 389
Score = 53.1 bits (126), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/78 (39%), Positives = 40/78 (51%), Gaps = 13/78 (16%)
Query: 18 GFASDGLLKACCGTGGTYNFNVSSACALPGVV--------ACKDPSASISWDGIHYTEAI 69
GFA+ LK CCG Y+ C G V +C +P ++SWDG+HYTEA
Sbjct: 308 GFANP--LKVCCGYHEKYD---HIWCGNKGKVNNTEIYGGSCPNPVMAVSWDGVHYTEAA 362
Query: 70 NRFVAKGWLYGPYADPPI 87
N+ VA L G DPP+
Sbjct: 363 NKHVADRTLNGLLTDPPV 380
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.322 0.138 0.472
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,486,638
Number of extensions: 92938
Number of successful extensions: 275
Number of sequences better than 1.0e-05: 23
Number of HSP's gapped: 278
Number of HSP's successfully gapped: 23
Length of query: 95
Length of database: 11,106,569
Length adjustment: 65
Effective length of query: 30
Effective length of database: 9,324,529
Effective search space: 279735870
Effective search space used: 279735870
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 105 (45.1 bits)