BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os05g0498800 Os05g0498800|AK064122
         (190 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G35695.1  | chr5:13869120-13869941 FORWARD LENGTH=212          125   1e-29
AT5G41980.1  | chr5:16793765-16794889 FORWARD LENGTH=375          115   2e-26
AT1G43722.1  | chr1:16496403-16497377 FORWARD LENGTH=325           80   1e-15
AT5G28730.1  | chr5:10779003-10780218 FORWARD LENGTH=297           71   3e-13
AT4G10890.1  | chr4:6688833-6692937 FORWARD LENGTH=528             64   5e-11

>AT5G35695.1 | chr5:13869120-13869941 FORWARD LENGTH=212
          Length = 211

 Score =  125 bits (314), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 71/182 (39%), Positives = 94/182 (51%), Gaps = 19/182 (10%)

Query: 18  GWEGSATDARVLTSAVNKGFQVPPGKFYLVDGGYANTYSFLAPYRRVRYHLKEYGAGRRR 77
           GWEGSA D+RVL+ A+ K        FYLVD G+AN  +FLAP+R VRYHL+E+   RR 
Sbjct: 31  GWEGSAHDSRVLSDALRK--------FYLVDCGFANRLNFLAPFRGVRYHLQEFAGQRRD 82

Query: 78  PQNYKELFNHRHAVLRNHVERTLGVVKKRFPILKVATFHKIENQVKIPVAAAVFHNIIRS 137
           P+   ELFN RH  LRN +ER  G+ K RF I K A     + Q  + +  A  HN +R 
Sbjct: 83  PETPHELFNLRHVSLRNVIERIFGIFKSRFAIFKSAPPFSYKKQAGLVLTCAALHNFLRK 142

Query: 138 LN-----------GDEQWLNNQPHNIHPSNYVDLPDGDEGNDQSTNQGNLLRDTIAHQMW 186
                        G+E  + N   N   +N +D  +  E   Q     N+ R ++A  MW
Sbjct: 143 ECRSDEADFPDEVGNEGDVVNNEGNAMNTNEIDNEEPLEAQKQDRENTNMWRKSMAEDMW 202

Query: 187 ND 188
            D
Sbjct: 203 KD 204



>AT5G41980.1 | chr5:16793765-16794889 FORWARD LENGTH=375
          Length = 374

 Score =  115 bits (287), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 70/203 (34%), Positives = 104/203 (51%), Gaps = 23/203 (11%)

Query: 1   NVMIACDFDLKITFMSIGWEGSATDARVLTSAVNK--GFQVPPGKFYLVDGGYANTYSFL 58
           NV+ A  FDL+  ++  GWEGSA+D +VL +A+ +    QVP GK+Y+VD  Y N   F+
Sbjct: 174 NVLAASSFDLRFNYVLAGWEGSASDQQVLNAALTRRNKLQVPQGKYYIVDNKYPNLPGFI 233

Query: 59  APYRRVRYHLKEYGAGRRRPQNYKELFNHRHAVLRNHVERTLGVVKKRFPILKVATFHKI 118
           APY         +G      +  KE+FN RH +L   + RT G +K+RFPIL  A  + +
Sbjct: 234 APY---------HGVSTNSREEAKEMFNERHKLLHRAIHRTFGALKERFPILLSAPPYPL 284

Query: 119 ENQVKIPVAAAVFHNIIRSLNGD--------EQWLNNQPHNIH---PSNYVDLPDGDEGN 167
           + QVK+ +AA   HN +R    D        E+ L     +         V++   + G 
Sbjct: 285 QTQVKLVIAACALHNYVRLEKPDDLVFRMFEEETLAEAGEDREVALEEEQVEIVGQEHGF 344

Query: 168 DQSTNQGNL-LRDTIAHQMWNDY 189
                + +L LRD IA ++WN Y
Sbjct: 345 RPEEVEDSLRLRDEIASELWNHY 367



>AT1G43722.1 | chr1:16496403-16497377 FORWARD LENGTH=325
          Length = 324

 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 47/115 (40%), Positives = 62/115 (53%), Gaps = 9/115 (7%)

Query: 1   NVMIACDFDLKITFMSIGWEGSATDARVLTSA--VNKGFQVPPG-KFYLVDGGYANTYSF 57
           N+M  CD  +  T++  G  GS  D  VL  A   +  F +PP  K+YLVD GY N    
Sbjct: 207 NIMAICDLKMLFTYIWNGAPGSCYDTAVLQIAQQSDSEFPLPPSEKYYLVDSGYPNKQGL 266

Query: 58  LAPYRR-----VRYHLKEYGAGRRRPQNYKELFNHRHAVLRNHVERTLGVVKKRF 107
           LAPYR      VRYH+ ++  G  RP+N  ELFN  H  LR+ +ERT  + K + 
Sbjct: 267 LAPYRSSRNRVVRYHMSQFYYG-PRPRNKHELFNQCHTSLRSVIERTFRIWKNKM 320



>AT5G28730.1 | chr5:10779003-10780218 FORWARD LENGTH=297
          Length = 296

 Score = 71.2 bits (173), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 34/66 (51%), Positives = 44/66 (66%), Gaps = 3/66 (4%)

Query: 1   NVMIACDFDLKITFMSIGWEGSATDARVLTSAVNKG--FQVPP-GKFYLVDGGYANTYSF 57
           NV+  CD D+  T+  +G  GS  DARVL++A++    F VPP  K+YLVD GYAN   +
Sbjct: 141 NVLAICDLDMLFTYCFVGMAGSTHDARVLSAAISDDPLFHVPPDSKYYLVDSGYANKRGY 200

Query: 58  LAPYRR 63
           LAPYRR
Sbjct: 201 LAPYRR 206



>AT4G10890.1 | chr4:6688833-6692937 FORWARD LENGTH=528
          Length = 527

 Score = 63.9 bits (154), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 37/89 (41%), Positives = 53/89 (59%), Gaps = 4/89 (4%)

Query: 25  DARVLT-SAVNKGFQVPPG--KFYLVDGGYANTYSFLAPYRRVRYHLKEYGAGRRRPQNY 81
           D +VL   A N+ F   P   K+YLV+  Y  T  +L P+RR+ YHL ++G G   P   
Sbjct: 73  DTKVLKYCARNESFSPHPSNRKYYLVNSVYPTTTGYLGPHRRILYHLGQFGRG-GPPVTV 131

Query: 82  KELFNHRHAVLRNHVERTLGVVKKRFPIL 110
           +ELFN +H  LR+ ++RT GV K ++ IL
Sbjct: 132 QELFNRKHLDLRSVIDRTFGVWKAKWRIL 160



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.321    0.138    0.428 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,586,948
Number of extensions: 198629
Number of successful extensions: 389
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 382
Number of HSP's successfully gapped: 5
Length of query: 190
Length of database: 11,106,569
Length adjustment: 93
Effective length of query: 97
Effective length of database: 8,556,881
Effective search space: 830017457
Effective search space used: 830017457
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 109 (46.6 bits)