BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0489800 Os05g0489800|AY438639
(164 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G65360.1 | chr5:26120099-26120509 REVERSE LENGTH=137 119 7e-28
AT5G10400.1 | chr5:3270478-3270888 REVERSE LENGTH=137 119 7e-28
AT5G10390.1 | chr5:3269065-3269475 REVERSE LENGTH=137 119 7e-28
AT3G27360.1 | chr3:10129459-10129869 REVERSE LENGTH=137 119 7e-28
AT1G09200.1 | chr1:2971722-2972132 REVERSE LENGTH=137 119 7e-28
AT1G75600.1 | chr1:28390753-28391461 FORWARD LENGTH=137 118 1e-27
AT5G10980.1 | chr5:3472591-3473349 REVERSE LENGTH=137 117 4e-27
AT4G40040.1 | chr4:18557539-18558236 REVERSE LENGTH=137 117 4e-27
AT4G40030.2 | chr4:18555840-18556827 REVERSE LENGTH=165 115 7e-27
AT5G65350.1 | chr5:26119406-26119825 REVERSE LENGTH=140 114 2e-26
AT1G19890.1 | chr1:6905034-6905792 FORWARD LENGTH=138 113 6e-26
AT1G13370.1 | chr1:4587926-4588522 REVERSE LENGTH=137 112 7e-26
AT1G01370.1 | chr1:143773-145400 FORWARD LENGTH=179 110 5e-25
AT5G12910.1 | chr5:4077162-4077557 FORWARD LENGTH=132 100 3e-22
>AT5G65360.1 | chr5:26120099-26120509 REVERSE LENGTH=137
Length = 136
Score = 119 bits (298), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 61/100 (61%), Positives = 71/100 (71%), Gaps = 1/100 (1%)
Query: 63 RKPHRFRPGTVALREIRKFQKTTELLIPFAPFSRLVREITDFYSKDVSRWTXXXXXXXXX 122
+KPHRFRPGTVALREIRK+QK+TELLI PF RLVREI + D+ R+
Sbjct: 37 KKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDL-RFQSSAVAALQE 95
Query: 123 XXXYHLVDIFEVSNLCAIHAKRVTIMQKDMQLARRIGGRR 162
+LV +FE +NLCAIHAKRVTIM KD+QLARRI G R
Sbjct: 96 AAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 135
>AT5G10400.1 | chr5:3270478-3270888 REVERSE LENGTH=137
Length = 136
Score = 119 bits (298), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 61/100 (61%), Positives = 71/100 (71%), Gaps = 1/100 (1%)
Query: 63 RKPHRFRPGTVALREIRKFQKTTELLIPFAPFSRLVREITDFYSKDVSRWTXXXXXXXXX 122
+KPHRFRPGTVALREIRK+QK+TELLI PF RLVREI + D+ R+
Sbjct: 37 KKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDL-RFQSSAVAALQE 95
Query: 123 XXXYHLVDIFEVSNLCAIHAKRVTIMQKDMQLARRIGGRR 162
+LV +FE +NLCAIHAKRVTIM KD+QLARRI G R
Sbjct: 96 AAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 135
>AT5G10390.1 | chr5:3269065-3269475 REVERSE LENGTH=137
Length = 136
Score = 119 bits (298), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 61/100 (61%), Positives = 71/100 (71%), Gaps = 1/100 (1%)
Query: 63 RKPHRFRPGTVALREIRKFQKTTELLIPFAPFSRLVREITDFYSKDVSRWTXXXXXXXXX 122
+KPHRFRPGTVALREIRK+QK+TELLI PF RLVREI + D+ R+
Sbjct: 37 KKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDL-RFQSSAVAALQE 95
Query: 123 XXXYHLVDIFEVSNLCAIHAKRVTIMQKDMQLARRIGGRR 162
+LV +FE +NLCAIHAKRVTIM KD+QLARRI G R
Sbjct: 96 AAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 135
>AT3G27360.1 | chr3:10129459-10129869 REVERSE LENGTH=137
Length = 136
Score = 119 bits (298), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 61/100 (61%), Positives = 71/100 (71%), Gaps = 1/100 (1%)
Query: 63 RKPHRFRPGTVALREIRKFQKTTELLIPFAPFSRLVREITDFYSKDVSRWTXXXXXXXXX 122
+KPHRFRPGTVALREIRK+QK+TELLI PF RLVREI + D+ R+
Sbjct: 37 KKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDL-RFQSSAVAALQE 95
Query: 123 XXXYHLVDIFEVSNLCAIHAKRVTIMQKDMQLARRIGGRR 162
+LV +FE +NLCAIHAKRVTIM KD+QLARRI G R
Sbjct: 96 AAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 135
>AT1G09200.1 | chr1:2971722-2972132 REVERSE LENGTH=137
Length = 136
Score = 119 bits (298), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 61/100 (61%), Positives = 71/100 (71%), Gaps = 1/100 (1%)
Query: 63 RKPHRFRPGTVALREIRKFQKTTELLIPFAPFSRLVREITDFYSKDVSRWTXXXXXXXXX 122
+KPHRFRPGTVALREIRK+QK+TELLI PF RLVREI + D+ R+
Sbjct: 37 KKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDL-RFQSSAVAALQE 95
Query: 123 XXXYHLVDIFEVSNLCAIHAKRVTIMQKDMQLARRIGGRR 162
+LV +FE +NLCAIHAKRVTIM KD+QLARRI G R
Sbjct: 96 AAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 135
>AT1G75600.1 | chr1:28390753-28391461 FORWARD LENGTH=137
Length = 136
Score = 118 bits (296), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/100 (61%), Positives = 71/100 (71%), Gaps = 1/100 (1%)
Query: 63 RKPHRFRPGTVALREIRKFQKTTELLIPFAPFSRLVREITDFYSKDVSRWTXXXXXXXXX 122
+KPHR+RPGTVALREIRK+QK+TELLI PF RLVREI Y D+ R+
Sbjct: 37 KKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDYKTDL-RFQSHAVLALQE 95
Query: 123 XXXYHLVDIFEVSNLCAIHAKRVTIMQKDMQLARRIGGRR 162
+LV +FE +NLCAIHAKRVTIM KD+QLARRI G R
Sbjct: 96 AAEAYLVGLFEDTNLCAIHAKRVTIMPKDVQLARRIRGER 135
>AT5G10980.1 | chr5:3472591-3473349 REVERSE LENGTH=137
Length = 136
Score = 117 bits (292), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/100 (60%), Positives = 71/100 (71%), Gaps = 1/100 (1%)
Query: 63 RKPHRFRPGTVALREIRKFQKTTELLIPFAPFSRLVREITDFYSKDVSRWTXXXXXXXXX 122
+KPHR+RPGTVALREIRK+QK+TELLI PF RLVREI + D+ R+
Sbjct: 37 KKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDL-RFQSHAVLALQE 95
Query: 123 XXXYHLVDIFEVSNLCAIHAKRVTIMQKDMQLARRIGGRR 162
+LV +FE +NLCAIHAKRVTIM KD+QLARRI G R
Sbjct: 96 AAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 135
>AT4G40040.1 | chr4:18557539-18558236 REVERSE LENGTH=137
Length = 136
Score = 117 bits (292), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/100 (60%), Positives = 71/100 (71%), Gaps = 1/100 (1%)
Query: 63 RKPHRFRPGTVALREIRKFQKTTELLIPFAPFSRLVREITDFYSKDVSRWTXXXXXXXXX 122
+KPHR+RPGTVALREIRK+QK+TELLI PF RLVREI + D+ R+
Sbjct: 37 KKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDL-RFQSHAVLALQE 95
Query: 123 XXXYHLVDIFEVSNLCAIHAKRVTIMQKDMQLARRIGGRR 162
+LV +FE +NLCAIHAKRVTIM KD+QLARRI G R
Sbjct: 96 AAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 135
>AT4G40030.2 | chr4:18555840-18556827 REVERSE LENGTH=165
Length = 164
Score = 115 bits (289), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 60/100 (60%), Positives = 71/100 (71%), Gaps = 1/100 (1%)
Query: 63 RKPHRFRPGTVALREIRKFQKTTELLIPFAPFSRLVREITDFYSKDVSRWTXXXXXXXXX 122
+KPHR+RPGTVALREIRK+QK+TELLI PF RLVREI + D+ R+
Sbjct: 65 KKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDL-RFQSHAVLALQE 123
Query: 123 XXXYHLVDIFEVSNLCAIHAKRVTIMQKDMQLARRIGGRR 162
+LV +FE +NLCAIHAKRVTIM KD+QLARRI G R
Sbjct: 124 AAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 163
>AT5G65350.1 | chr5:26119406-26119825 REVERSE LENGTH=140
Length = 139
Score = 114 bits (286), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/100 (58%), Positives = 71/100 (71%), Gaps = 1/100 (1%)
Query: 63 RKPHRFRPGTVALREIRKFQKTTELLIPFAPFSRLVREITDFYSKDVSRWTXXXXXXXXX 122
+KPHRFRPGTVALR+IRK+QK+TE+LI PF RLVREI + D+ R+
Sbjct: 37 KKPHRFRPGTVALRDIRKYQKSTEILIRKLPFQRLVREIAQDFKTDL-RFQSSAVAALQE 95
Query: 123 XXXYHLVDIFEVSNLCAIHAKRVTIMQKDMQLARRIGGRR 162
+LV +FE +NLCAIHAKRVTIM K++QLARRI G R
Sbjct: 96 AAEAYLVGLFEDTNLCAIHAKRVTIMPKEIQLARRIRGER 135
>AT1G19890.1 | chr1:6905034-6905792 FORWARD LENGTH=138
Length = 137
Score = 113 bits (282), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 70/101 (69%), Gaps = 1/101 (0%)
Query: 63 RKPHRFRPGTVALREIRKFQKTTELLIPFAPFSRLVREITDFYSKDVSRWTXXXXXXXXX 122
++ HRFRPGTVALREIRK+QK+T+LLI PF RLVREI + D+ R+
Sbjct: 38 KRAHRFRPGTVALREIRKYQKSTDLLIRKLPFQRLVREIAQDFKVDL-RFQSHAVLALQE 96
Query: 123 XXXYHLVDIFEVSNLCAIHAKRVTIMQKDMQLARRIGGRRP 163
+LV +FE +NLCAIHAKRVTIM KD+QLARRI G R
Sbjct: 97 AAEAYLVGLFEDTNLCAIHAKRVTIMSKDIQLARRIRGERA 137
>AT1G13370.1 | chr1:4587926-4588522 REVERSE LENGTH=137
Length = 136
Score = 112 bits (281), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 59/100 (59%), Positives = 69/100 (69%), Gaps = 1/100 (1%)
Query: 63 RKPHRFRPGTVALREIRKFQKTTELLIPFAPFSRLVREITDFYSKDVSRWTXXXXXXXXX 122
+KPHRFRPGTVALREIRK+QK+TELL PF RLVREI + D+ R+
Sbjct: 37 KKPHRFRPGTVALREIRKYQKSTELLNRKLPFQRLVREIAQDFKTDL-RFQSHAVLALQE 95
Query: 123 XXXYHLVDIFEVSNLCAIHAKRVTIMQKDMQLARRIGGRR 162
+LV +FE +NLCAIHAKRVTIM KD+QLARRI R
Sbjct: 96 AAEAYLVGLFEDTNLCAIHAKRVTIMPKDVQLARRIRAER 135
>AT1G01370.1 | chr1:143773-145400 FORWARD LENGTH=179
Length = 178
Score = 110 bits (274), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 56/105 (53%), Positives = 71/105 (67%), Gaps = 2/105 (1%)
Query: 62 QRKPHRFRPGTVALREIRKFQKTTELLIPFAPFSRLVREITDFYS-KDVSRWTXXXXXXX 120
Q+K +R+RPGTVAL+EIR FQK T LLIP A F R VR IT + ++RWT
Sbjct: 74 QKKSYRYRPGTVALKEIRHFQKQTNLLIPAASFIREVRSITHMLAPPQINRWTAEALVAL 133
Query: 121 XXXXXYHLVDIFEVSNLCAIHAKRVTIMQKDMQLARRIGGR-RPW 164
+LV +F S LCAIHA+RVT+M+KD +LARR+GG+ RPW
Sbjct: 134 QEAAEDYLVGLFSDSMLCAIHARRVTLMRKDFELARRLGGKGRPW 178
>AT5G12910.1 | chr5:4077162-4077557 FORWARD LENGTH=132
Length = 131
Score = 100 bits (249), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/100 (51%), Positives = 68/100 (68%), Gaps = 1/100 (1%)
Query: 63 RKPHRFRPGTVALREIRKFQKTTELLIPFAPFSRLVREITDFYSKDVSRWTXXXXXXXXX 122
+KP+R++PGTVALREIRK+QKTT+L+I PF RLV+EI D+ R+
Sbjct: 32 KKPYRYKPGTVALREIRKYQKTTDLVIRKLPFQRLVKEIAQSLKADL-RFQTGAVSALQE 90
Query: 123 XXXYHLVDIFEVSNLCAIHAKRVTIMQKDMQLARRIGGRR 162
+V +FE +NLCA+HAKR TIM KD+QLA+R+ G R
Sbjct: 91 AAEAFMVGMFEDTNLCAMHAKRSTIMPKDIQLAKRLRGDR 130
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.324 0.134 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,511,070
Number of extensions: 66485
Number of successful extensions: 185
Number of sequences better than 1.0e-05: 14
Number of HSP's gapped: 171
Number of HSP's successfully gapped: 14
Length of query: 164
Length of database: 11,106,569
Length adjustment: 91
Effective length of query: 73
Effective length of database: 8,611,713
Effective search space: 628655049
Effective search space used: 628655049
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 108 (46.2 bits)