BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os05g0482600 Os05g0482600|AK120343
         (455 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G54190.1  | chr3:20061759-20063880 REVERSE LENGTH=468          764   0.0  
AT2G38630.1  | chr2:16154283-16156302 REVERSE LENGTH=468          744   0.0  

>AT3G54190.1 | chr3:20061759-20063880 REVERSE LENGTH=468
          Length = 467

 Score =  764 bits (1973), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/467 (79%), Positives = 412/467 (88%), Gaps = 12/467 (2%)

Query: 1   MEARRISASPRPCSGRRVVARKRPRHEAAVNSVRKLQRREISSCRDRAFSMSAAQERFRN 60
           ME RRI+ASPRPCSGRR+VA+KR R +  VNSV+KLQRREISS +DRAFS+S AQERFRN
Sbjct: 1   MEGRRITASPRPCSGRRIVAKKRSRPDGFVNSVKKLQRREISSRKDRAFSISTAQERFRN 60

Query: 61  IQLQEEFDTHDPKENSLL-LPYLRKRSKIIEIVAARDIVFALSQSGVCAAFSRETNRRIC 119
           ++L E++DTHDPK + L+ LP+L KR+K+IEIVAARDIVFAL+ SGVCAAFSRE+N+RIC
Sbjct: 61  MRLVEQYDTHDPKGHCLVALPFLMKRTKVIEIVAARDIVFALAHSGVCAAFSRESNKRIC 120

Query: 120 FLNGSPDEVIRSLFYNKNNESLITVSVYGSENFSALRCRTTRIEYIRRAKPDAGFPLFES 179
           FLN SPDEVIRSLFYNKNN+SLITVSVY S+NFS+L+CR+TRIEYI R +PDAGF LFES
Sbjct: 121 FLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTRIEYILRGQPDAGFALFES 180

Query: 180 ESLKWPGFVEFDDVNGKVLTYSAQDSTYKVFDLKNYTLLYSISDKNVQEIKISPGIMLLI 239
           ESLKWPGFVEFDDVNGKVLTYSAQDS YKVFDLKNYT+LYSISDKNVQEIKISPGIMLLI
Sbjct: 181 ESLKWPGFVEFDDVNGKVLTYSAQDSVYKVFDLKNYTMLYSISDKNVQEIKISPGIMLLI 240

Query: 240 YTRTSSSVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKLLVKQEGENLQILDVRN 299
           + R +S VPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKLLVKQE ENLQILDVRN
Sbjct: 241 FKRAASHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRN 300

Query: 300 FQLTEVSRTEFMTPSAFIFLYELQLFLTFRNRSVAVWNFRGELVTSFEDHLLWHPDCNTN 359
            +L EVSR EFMTPSAFIFLYE QLFLTFRNR+V+VWNFRGELVTSFEDHLLWHPDCNTN
Sbjct: 301 AELMEVSRAEFMTPSAFIFLYENQLFLTFRNRNVSVWNFRGELVTSFEDHLLWHPDCNTN 360

Query: 360 NIYITSDQDLIISYCKADSNDSSSEENAGSINISNILTGKCLAKI-----------KASD 408
           NIYITSDQDLIISYCKAD+ D   E NAGSINISNILTGKCLAKI            +S 
Sbjct: 361 NIYITSDQDLIISYCKADTEDQWIEGNAGSINISNILTGKCLAKITPSSGPPKDDESSSS 420

Query: 409 LCKQKKAWKFQSTALEALEDITALYYDEERDEIYTGNRQGLVHVWSN 455
            C  K + + ++   EALEDITAL+YDEER+EIYTGNR GLVHVWSN
Sbjct: 421 NCMGKNSKQRRNAVAEALEDITALFYDEERNEIYTGNRHGLVHVWSN 467



>AT2G38630.1 | chr2:16154283-16156302 REVERSE LENGTH=468
          Length = 467

 Score =  744 bits (1920), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/469 (78%), Positives = 408/469 (86%), Gaps = 17/469 (3%)

Query: 1   MEARRISASPRPCSG-RRVVARKRPRHEAAVNSVRKLQRREISSCRDRAFSMSAAQERFR 59
           ME RRI A+PRPCSG RRV+A+KR R +  VNSV+KLQRREISS  DRAFS+S AQERFR
Sbjct: 2   MEGRRIIANPRPCSGSRRVIAKKRSRPDGFVNSVKKLQRREISSRMDRAFSISTAQERFR 61

Query: 60  NIQLQEEFDTHDPKENSLL-LPYLRKRSKIIEIVAARDIVFALSQSGVCAAFSRETNRRI 118
           N++L E++DTHDPK   L+ LP L KRSK+IEIVAARDIVFAL+ SGVCA+FSRETN+++
Sbjct: 62  NMRLVEQYDTHDPKGYCLVSLPNLLKRSKVIEIVAARDIVFALTLSGVCASFSRETNKKV 121

Query: 119 CFLNGSPDEVIRSLFYNKNNESLITVSVYGSENFSALRCRTTRIEYIRRAKPDAGFPLFE 178
           CFLN SPDEVIRSLFYNKNN+SLITVSVY S+N+S+L+CR+TRIEYI R + DAGFPLFE
Sbjct: 122 CFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNYSSLKCRSTRIEYILRGQADAGFPLFE 181

Query: 179 SESLKWPGFVEFDDVNGKVLTYSAQDSTYKVFDLKNYTLLYSISDKNVQEIKISPGIMLL 238
           SESLKWPGFVEFDDVNGKVLTYSAQDS YKVFDLKNY LLYSISDKNVQEIKISPGIMLL
Sbjct: 182 SESLKWPGFVEFDDVNGKVLTYSAQDSVYKVFDLKNYALLYSISDKNVQEIKISPGIMLL 241

Query: 239 IYTRTSSSVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKLLVKQEGENLQILDVR 298
           I+ R +S VPLKILSIEDGT+LKSF+HLLHRNKKVDFIEQFNEKLLVKQE ENLQILDVR
Sbjct: 242 IFKRAASHVPLKILSIEDGTLLKSFHHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVR 301

Query: 299 NFQLTEVSRTEFMTPSAFIFLYELQLFLTFRNRSVAVWNFRGELVTSFEDHLLWHPDCNT 358
           N +L EVSRT+FMTPSAFIFLYE QLFLTFRNR+V+VWNFRGELVTSFEDHLLWHPDCNT
Sbjct: 302 NAELIEVSRTDFMTPSAFIFLYENQLFLTFRNRNVSVWNFRGELVTSFEDHLLWHPDCNT 361

Query: 359 NNIYITSDQDLIISYCKADSNDSSSEENAGSINISNILTGKCLAKIKA------------ 406
           NNIYITSDQDLIISYCKAD+ D   E NAGSINISNILTGKCLAKIKA            
Sbjct: 362 NNIYITSDQDLIISYCKADTEDQWIEGNAGSINISNILTGKCLAKIKANNGPPKEEDCSS 421

Query: 407 SDLCKQKKAWKFQSTALEALEDITALYYDEERDEIYTGNRQGLVHVWSN 455
           SDL    +    +S   EALEDITAL+YDEER+EIYTGNR GL+HVWSN
Sbjct: 422 SDLGNSSRR---RSAVAEALEDITALFYDEERNEIYTGNRHGLLHVWSN 467



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.320    0.134    0.386 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,712,088
Number of extensions: 402131
Number of successful extensions: 1164
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 1159
Number of HSP's successfully gapped: 2
Length of query: 455
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 353
Effective length of database: 8,310,137
Effective search space: 2933478361
Effective search space used: 2933478361
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 113 (48.1 bits)