BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0474400 Os05g0474400|AK060006
(220 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G40380.1 | chr2:16864734-16865375 REVERSE LENGTH=214 144 3e-35
AT3G56110.1 | chr3:20822228-20822857 REVERSE LENGTH=210 142 1e-34
AT2G38360.1 | chr2:16069840-16070502 REVERSE LENGTH=221 140 4e-34
AT5G01640.1 | chr5:241442-242113 REVERSE LENGTH=224 138 3e-33
AT5G05380.1 | chr5:1592214-1592867 FORWARD LENGTH=218 133 7e-32
AT5G07110.1 | chr5:2206121-2206771 FORWARD LENGTH=217 119 1e-27
AT1G55190.1 | chr1:20588450-20589019 FORWARD LENGTH=190 76 2e-14
AT3G13720.1 | chr3:4495202-4495768 REVERSE LENGTH=189 69 2e-12
AT1G08770.1 | chr1:2808933-2809562 FORWARD LENGTH=210 65 4e-11
AT1G17700.1 | chr1:6089588-6090130 FORWARD LENGTH=181 63 9e-11
AT4G00005.1 | chr4:1180-1536 REVERSE LENGTH=119 63 1e-10
AT1G04260.1 | chr1:1140749-1141297 REVERSE LENGTH=183 62 2e-10
AT3G13710.1 | chr3:4492992-4493558 REVERSE LENGTH=189 60 1e-09
AT1G55640.1 | chr1:20793771-20794334 FORWARD LENGTH=188 58 5e-09
AT5G56230.1 | chr5:22758768-22759328 REVERSE LENGTH=187 47 6e-06
>AT2G40380.1 | chr2:16864734-16865375 REVERSE LENGTH=214
Length = 213
Score = 144 bits (363), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 81/181 (44%), Positives = 101/181 (55%), Gaps = 5/181 (2%)
Query: 34 PIATPAFRLFXXXXXXXXXXXXXXXXPWTELVDRSAFSRPDSLSDATSRLRRNLAYFRVN 93
PI + AFR F PW ELVDRS+F+RPDSL+D+ SR+R+NLAYF+VN
Sbjct: 22 PINSHAFRTFLSRLSSSLRESLSQRRPWLELVDRSSFARPDSLTDSFSRIRKNLAYFKVN 81
Query: 94 YAAVVAFALGASLLAHPFSXXXXXXXXXXXXXXXXFRGSDQPVVLFGRTFSDRETXXXXX 153
Y+A+V+ L SLL+HPFS FR SDQP+VLFGR+FSDRET
Sbjct: 82 YSAIVSLVLAFSLLSHPFSLLVLLSLLGSWMFLYLFRSSDQPLVLFGRSFSDRETLLGLV 141
Query: 154 XXXXXXXXXXXXXXXIISGLLVGGAIVAVHGACRMPEDLFLXXXXXXSGNSAAQGLLSFL 213
+ S L +G AIV +HGA R+P+DLFL A GLLSF+
Sbjct: 142 LTTIVVVFMTSVGSLLTSALTIGIAIVCLHGAFRVPDDLFL-----DEQEPANAGLLSFI 196
Query: 214 G 214
G
Sbjct: 197 G 197
>AT3G56110.1 | chr3:20822228-20822857 REVERSE LENGTH=210
Length = 209
Score = 142 bits (358), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/180 (44%), Positives = 98/180 (54%), Gaps = 5/180 (2%)
Query: 34 PIATPAFRLFXXXXXXXXXXXXXXXXPWTELVDRSAFSRPDSLSDATSRLRRNLAYFRVN 93
PI TPAFR F PWTEL+DRS+ +RP+SL+DA SR+R+NLAYF+VN
Sbjct: 20 PINTPAFRTFFSRLSTSIRDGLSQRRPWTELIDRSSMARPESLTDALSRIRKNLAYFKVN 79
Query: 94 YAAVVAFALGASLLAHPFSXXXXXXXXXXXXXXXXFRGSDQPVVLFGRTFSDRETXXXXX 153
Y A+V+ L SL +HP S FR SDQP+V+FGRTFSDRET
Sbjct: 80 YVAIVSLVLAFSLFSHPLSLLVLIGLLGGWMFLYLFRPSDQPLVVFGRTFSDRETLLALV 139
Query: 154 XXXXXXXXXXXXXXXIISGLLVGGAIVAVHGACRMPEDLFLXXXXXXSGNSAAQGLLSFL 213
+ S L++G AIV VHGA +P+DLFL A GLLSFL
Sbjct: 140 LSTIVVVFMTSVGSLLTSALMIGVAIVCVHGAFVVPDDLFL-----DEQEPANAGLLSFL 194
>AT2G38360.1 | chr2:16069840-16070502 REVERSE LENGTH=221
Length = 220
Score = 140 bits (354), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 77/181 (42%), Positives = 95/181 (52%), Gaps = 5/181 (2%)
Query: 34 PIATPAFRLFXXXXXXXXXXXXXXXXPWTELVDRSAFSRPDSLSDATSRLRRNLAYFRVN 93
PIATPAFR F PW EL DRSA S+P+S+SDA R+R+N +YF+VN
Sbjct: 30 PIATPAFRNFINQITETVKNGLSKRRPWAELADRSALSKPESISDAAVRIRKNYSYFKVN 89
Query: 94 YAAVVAFALGASLLAHPFSXXXXXXXXXXXXXXXXFRGSDQPVVLFGRTFSDRETXXXXX 153
Y V +G SL+ HPFS FR +DQP+VLFGRTFSDRET
Sbjct: 90 YLTVATAIVGFSLVTHPFSLVFLLCLLASWLFLYLFRPTDQPIVLFGRTFSDRETLGCLI 149
Query: 154 XXXXXXXXXXXXXXXIISGLLVGGAIVAVHGACRMPEDLFLXXXXXXSGNSAAQGLLSFL 213
++S +++G A++ HGA R PEDLFL AA G LSFL
Sbjct: 150 LFSIFVIFLTDVGSVLVSAMMIGVALICAHGAFRAPEDLFL-----DEQEPAATGFLSFL 204
Query: 214 G 214
G
Sbjct: 205 G 205
>AT5G01640.1 | chr5:241442-242113 REVERSE LENGTH=224
Length = 223
Score = 138 bits (347), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 72/158 (45%), Positives = 93/158 (58%), Gaps = 5/158 (3%)
Query: 60 PWTELVDRSAFSRPDSLSDATSRLRRNLAYFRVNYAAVVAFALGASLLAHPFSXXXXXXX 119
PW+EL+DRSAF++PDSLS+A +R R+N +YFRVNY +VA LG SLLAHPFS
Sbjct: 56 PWSELLDRSAFTKPDSLSEAGTRFRKNSSYFRVNYVCIVALILGFSLLAHPFSLILLLCL 115
Query: 120 XXXXXXXXXFRGSDQPVVLFGRTFSDRETXXXXXXXXXXXXXXXXXXXXIISGLLVGGAI 179
FR SD+P++LFGR+FS+ ET +IS L++G A
Sbjct: 116 AASWLFLYLFRPSDRPLILFGRSFSEYETLGGLILSTIAVIFFTSVGSVLISALMIGIAT 175
Query: 180 VAVHGACRMPEDLFLXXXXXXSGNSAAQGLLSFLGAPG 217
+ VHGA R P+DLFL + AA G LSF+G P
Sbjct: 176 ICVHGAFRAPDDLFL-----DEQDHAASGFLSFIGVPA 208
>AT5G05380.1 | chr5:1592214-1592867 FORWARD LENGTH=218
Length = 217
Score = 133 bits (335), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 81/182 (44%), Positives = 97/182 (53%), Gaps = 5/182 (2%)
Query: 32 DAPIATPAFRLFXXXXXXXXXXXXXXXXPWTELVDRSAFSRPDSLSDATSRLRRNLAYFR 91
P++TPAFR F PW ELVDRSA SRP+SL+DA SR+RRNL YF+
Sbjct: 21 QQPVSTPAFRTFLSRLSSSIRQSLSQRRPWLELVDRSAISRPESLTDAYSRIRRNLPYFK 80
Query: 92 VNYAAVVAFALGASLLAHPFSXXXXXXXXXXXXXXXXFRGSDQPVVLFGRTFSDRETXXX 151
VNY +V+ L SLL+HPFS FR SDQP+V+ GRTFSDRET
Sbjct: 81 VNYVTIVSLVLALSLLSHPFSLLVLLCLFCAWIFLYLFRPSDQPLVVLGRTFSDRETLGV 140
Query: 152 XXXXXXXXXXXXXXXXXIISGLLVGGAIVAVHGACRMPEDLFLXXXXXXSGNSAAQGLLS 211
+ S L++G IV +HGA R+PEDLFL A GLLS
Sbjct: 141 LVILTIVVVFLTSVGSLLTSALMIGFGIVCLHGAFRVPEDLFL-----DDQEPANTGLLS 195
Query: 212 FL 213
FL
Sbjct: 196 FL 197
>AT5G07110.1 | chr5:2206121-2206771 FORWARD LENGTH=217
Length = 216
Score = 119 bits (299), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/135 (49%), Positives = 79/135 (58%)
Query: 60 PWTELVDRSAFSRPDSLSDATSRLRRNLAYFRVNYAAVVAFALGASLLAHPFSXXXXXXX 119
PW ELVDRSAFSRP SLS+ATSR+R+N +YFR NY +VA L ASLL HPF+
Sbjct: 46 PWAELVDRSAFSRPPSLSEATSRVRKNFSYFRANYITLVAILLAASLLTHPFALFLLASL 105
Query: 120 XXXXXXXXXFRGSDQPVVLFGRTFSDRETXXXXXXXXXXXXXXXXXXXXIISGLLVGGAI 179
FR +DQP+V+ GRTFSD ET ++S L VG
Sbjct: 106 AASWLFLYFFRPADQPLVIGGRTFSDLETLGILCLSTVVVMFMTSVGSLLMSTLAVGIMG 165
Query: 180 VAVHGACRMPEDLFL 194
VA+HGA R PEDLFL
Sbjct: 166 VAIHGAFRAPEDLFL 180
>AT1G55190.1 | chr1:20588450-20589019 FORWARD LENGTH=190
Length = 189
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 64/153 (41%), Gaps = 4/153 (2%)
Query: 60 PWTELVDRSAFSRPDSLSDATSRLRRNLAYFRVNYAAVVAFALGASLLAHPFSXXXXXXX 119
PW + D + + P DA SR++ NL YFR NYA V F L SLL HP S
Sbjct: 38 PWKSMFDFESMTLPHGFFDAISRIKTNLGYFRANYAIGVLFILFLSLLYHPTSLIVLSIL 97
Query: 120 XXXXXXXXXFRGSDQPVVLFGRTFSDRETXXXXXXXXXXXXXXXXXXXXIISGLLVGGAI 179
R D+P+V+FG DR I+ LL +
Sbjct: 98 VVFWIFLYFLR--DEPLVVFGYQIDDRTVLIGLSVLTVVMLLLTHATSNILGSLLTAAVL 155
Query: 180 VAVHGACRMPEDLFLXXXXXXSGNSAAQGLLSF 212
V +H A R ++LFL + + A GL+S+
Sbjct: 156 VLIHAAVRRSDNLFL--DEEAAAVTEASGLMSY 186
>AT3G13720.1 | chr3:4495202-4495768 REVERSE LENGTH=189
Length = 188
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 62/152 (40%), Gaps = 5/152 (3%)
Query: 61 WTELVDRSAFSRPDSLSDATSRLRRNLAYFRVNYAAVVAFALGASLLAHPFSXXXXXXXX 120
W + D + P +SDA +R++ NLAYFR+NYA VV + SL+ HP S
Sbjct: 39 WRVMFDFHSMGLPHGVSDAFTRIKTNLAYFRMNYAIVVLIVIFFSLIWHPTSLIVFTVLV 98
Query: 121 XXXXXXXXFRGSDQPVVLFGRTFSDRETXXXXXXXXXXXXXXXXXXXXIISGLLVGGAIV 180
R D+P+ LF DR I+ L+ G +V
Sbjct: 99 VVWIFLYFLR--DEPIKLFRFQIDDRTVLIVLSVLTVVLLLLTNATFNIVGALVTGAVLV 156
Query: 181 AVHGACRMPEDLFLXXXXXXSGNSAAQGLLSF 212
+H R EDLFL + + GL S+
Sbjct: 157 LIHSVVRKTEDLFL---DEEAATTETSGLTSY 185
>AT1G08770.1 | chr1:2808933-2809562 FORWARD LENGTH=210
Length = 209
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 61/149 (40%)
Query: 60 PWTELVDRSAFSRPDSLSDATSRLRRNLAYFRVNYAAVVAFALGASLLAHPFSXXXXXXX 119
PW E++D SA S P +A + L+ N++YFR NYA V + L+ HP S
Sbjct: 49 PWREILDLSALSLPRGYDEAMAHLKHNISYFRGNYALAVLAIVFLGLIYHPMSMIAFIVV 108
Query: 120 XXXXXXXXXFRGSDQPVVLFGRTFSDRETXXXXXXXXXXXXXXXXXXXXIISGLLVGGAI 179
R ++ +V+ G+ D+ ++ L++G I
Sbjct: 109 FIGWILLYFSRDANDSIVISGKEVDDKIVLVLLSLVTVLALVYTDVGENVLVSLIIGLLI 168
Query: 180 VAVHGACRMPEDLFLXXXXXXSGNSAAQG 208
V HGA R +DLFL G + G
Sbjct: 169 VGAHGAFRNTDDLFLDEESARRGGLVSAG 197
>AT1G17700.1 | chr1:6089588-6090130 FORWARD LENGTH=181
Length = 180
Score = 63.2 bits (152), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 55/134 (41%), Gaps = 2/134 (1%)
Query: 60 PWTELVDRSAFSRPDSLSDATSRLRRNLAYFRVNYAAVVAFALGASLLAHPFSXXXXXXX 119
PW +++D +F+ P L+ +R+R N YF+ NY VV F++ SL+ +PFS
Sbjct: 38 PWKQMLDLGSFNFPRKLATVITRIRANTVYFQTNYTIVVLFSVFLSLIWNPFSLLVLLAL 97
Query: 120 XXXXXXXXXFRGSDQPVVLFGRTFSDRETXXXXXXXXXXXXXXXXXXXXIISGLLVGGAI 179
R D+P+ +F R R I ++ G
Sbjct: 98 LGAWLFLYFLR--DEPLTVFDREIDHRIVLIIMSVITLSILFLTDAKLNIAVAIVAGALA 155
Query: 180 VAVHGACRMPEDLF 193
V H A R EDLF
Sbjct: 156 VLSHAAVRKTEDLF 169
>AT4G00005.1 | chr4:1180-1536 REVERSE LENGTH=119
Length = 118
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 46/96 (47%)
Query: 81 SRLRRNLAYFRVNYAAVVAFALGASLLAHPFSXXXXXXXXXXXXXXXXFRGSDQPVVLFG 140
+R +N +YFRVNY ++A + SL AHPFS FR SD+P++L G
Sbjct: 2 TRFWKNSSYFRVNYVCIIALIISFSLPAHPFSLILLLCLAASWLFLYLFRPSDRPLILIG 61
Query: 141 RTFSDRETXXXXXXXXXXXXXXXXXXXXIISGLLVG 176
R+FS+ ET +IS L++G
Sbjct: 62 RSFSEYETLGGLILSTIAVIFFTSVGSVLISALMIG 97
>AT1G04260.1 | chr1:1140749-1141297 REVERSE LENGTH=183
Length = 182
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Query: 60 PWTELVDRSAFSRPDSLSDATSRLRRNLAYFRVNYAAVVAFALGASLLAHPFSXXXXXXX 119
PW + +D SAFS P S++DAT+R+ +NL +FR+NY+ +++ LG +L+ P +
Sbjct: 22 PWGDFLDLSAFSFPSSIADATTRVTQNLTHFRINYSIILSILLGLTLITRPIAILAFIAV 81
Query: 120 XXXXXXXXXFRGSDQPVVLFGRTFSD 145
R ++P+ +FG T D
Sbjct: 82 GLAWFFLYFAR--EEPLTIFGFTIDD 105
>AT3G13710.1 | chr3:4492992-4493558 REVERSE LENGTH=189
Length = 188
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 54/134 (40%), Gaps = 2/134 (1%)
Query: 61 WTELVDRSAFSRPDSLSDATSRLRRNLAYFRVNYAAVVAFALGASLLAHPFSXXXXXXXX 120
W + D + P +SD SR++ NLAYFR NYA V+ + SL+ HP S
Sbjct: 39 WRVMFDLHSTGLPHGVSDVFSRIKTNLAYFRSNYAIVILNVIFFSLIWHPTSLIVFTGLV 98
Query: 121 XXXXXXXXFRGSDQPVVLFGRTFSDRETXXXXXXXXXXXXXXXXXXXXIISGLLVGGAIV 180
R D P+ +F DR I++ L+ G +V
Sbjct: 99 FLWIFLYFLR--DVPLKVFRFQIDDRAVLIGLSVITIVLLLLTNATFNIVAALMAGAVLV 156
Query: 181 AVHGACRMPEDLFL 194
+H R +DLFL
Sbjct: 157 LIHAVIRKTDDLFL 170
>AT1G55640.1 | chr1:20793771-20794334 FORWARD LENGTH=188
Length = 187
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 56/134 (41%), Gaps = 2/134 (1%)
Query: 61 WTELVDRSAFSRPDSLSDATSRLRRNLAYFRVNYAAVVAFALGASLLAHPFSXXXXXXXX 120
W+E + + RP S S A SR++ NL +F VNY + A ++ L+ P +
Sbjct: 41 WSEFLAFGSIDRPSSFSPAVSRVKLNLHHFAVNYVLLTAASITLFLIGDPMALVTVASFV 100
Query: 121 XXXXXXXXFRGSDQPVVLFGRTFSDRETXXXXXXXXXXXXXXXXXXXXIISGLLVGGAIV 180
+R D P+VL+GR SDR +I G++ +
Sbjct: 101 AMWLLLYFYR--DHPLVLYGRHISDRVIVFGLILGSLWALWFINSLQCLILGVVTSVLLC 158
Query: 181 AVHGACRMPEDLFL 194
VH R +DLF+
Sbjct: 159 LVHAIIRNSDDLFV 172
>AT5G56230.1 | chr5:22758768-22759328 REVERSE LENGTH=187
Length = 186
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 54/139 (38%), Gaps = 9/139 (6%)
Query: 60 PWTELVDRSAFSRPDSLSDATSRLRRNLAYFRVNYAAVV----AFALGASLLAHPFSXXX 115
PW+EL+ FS P+S S R + N YF VNY +V AFAL + A P +
Sbjct: 37 PWSELIFSGDFSLPESFSSLLLRSKTNFNYFFVNYTIIVSTCAAFAL---ITASPVALIV 93
Query: 116 XXXXXXXXXXXXXFRGSDQPVVLFGRTFSDRETXXXXXXXXXXXXXXXXXXXXIISGLLV 175
FR + P++L+ DR + G+ V
Sbjct: 94 VGAIIALWLIFHFFR--EDPLILWSFQVGDRTVLLFLVLASVWAIWFTNSAVNLAVGVSV 151
Query: 176 GGAIVAVHGACRMPEDLFL 194
G + +H R ++LFL
Sbjct: 152 GLLLCIIHAVFRNSDELFL 170
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.325 0.138 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,465,281
Number of extensions: 58607
Number of successful extensions: 129
Number of sequences better than 1.0e-05: 15
Number of HSP's gapped: 105
Number of HSP's successfully gapped: 15
Length of query: 220
Length of database: 11,106,569
Length adjustment: 95
Effective length of query: 125
Effective length of database: 8,502,049
Effective search space: 1062756125
Effective search space used: 1062756125
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 109 (46.6 bits)