BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0466100 Os05g0466100|AK108647
(324 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G41380.1 | chr5:16562129-16563553 REVERSE LENGTH=308 97 9e-21
AT1G63820.1 | chr1:23682529-23684050 REVERSE LENGTH=294 94 7e-20
AT1G04500.1 | chr1:1221757-1224235 REVERSE LENGTH=387 85 4e-17
AT2G33350.1 | chr2:14134116-14136836 FORWARD LENGTH=411 83 2e-16
AT3G12890.1 | chr3:4099223-4100277 FORWARD LENGTH=252 76 2e-14
AT5G53420.1 | chr5:21673683-21675469 FORWARD LENGTH=265 72 4e-13
AT4G27900.1 | chr4:13890858-13892777 FORWARD LENGTH=262 68 6e-12
AT3G02380.1 | chr3:487438-488624 REVERSE LENGTH=348 60 1e-09
AT5G59990.1 | chr5:24151206-24153084 REVERSE LENGTH=242 59 2e-09
AT5G24930.1 | chr5:8589325-8590949 FORWARD LENGTH=407 57 1e-08
AT5G57660.1 | chr5:23355573-23356729 FORWARD LENGTH=356 55 4e-08
AT2G24790.1 | chr2:10566959-10567946 FORWARD LENGTH=295 54 1e-07
AT5G61380.1 | chr5:24675540-24678176 FORWARD LENGTH=619 54 2e-07
AT5G15840.1 | chr5:5171343-5172697 REVERSE LENGTH=374 53 2e-07
AT5G15850.1 | chr5:5176297-5177473 REVERSE LENGTH=356 52 5e-07
AT1G49130.1 | chr1:18174741-18175936 REVERSE LENGTH=327 51 9e-07
AT2G46790.1 | chr2:19232874-19234901 FORWARD LENGTH=469 50 2e-06
AT1G73870.1 | chr1:27779214-27780522 FORWARD LENGTH=393 50 2e-06
>AT5G41380.1 | chr5:16562129-16563553 REVERSE LENGTH=308
Length = 307
Score = 97.4 bits (241), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 61/93 (65%), Gaps = 15/93 (16%)
Query: 132 LRRVFSTGDLQAMNVXXXXXXXXXFSGDICIQEVGGPFSQ----KVGRYSAEERKERIER 187
+RRV+STGDLQ N+ + PFS+ KVGRYSAEERKE+I +
Sbjct: 173 MRRVYSTGDLQN-NMEMQRSS----------ENSTMPFSEEQNFKVGRYSAEERKEKISK 221
Query: 188 YRVKRQQRNFHKKITYACRKTLADSRPRVQGRF 220
YR KR QRNF K I YACRKTLADSRPR++GRF
Sbjct: 222 YRAKRNQRNFTKTIKYACRKTLADSRPRIRGRF 254
>AT1G63820.1 | chr1:23682529-23684050 REVERSE LENGTH=294
Length = 293
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 62/95 (65%), Gaps = 8/95 (8%)
Query: 132 LRRVFSTGDLQAMNVXXXXXXXXXFSGDICIQEV------GGPFSQKVGRYSAEERKERI 185
+RRV+STGDLQ N+ +S + + G S +VGRYS+EERKE+I
Sbjct: 139 MRRVYSTGDLQ--NLGRDFTGQRSYSSPLAAESSPTTVFSGDEQSLRVGRYSSEERKEKI 196
Query: 186 ERYRVKRQQRNFHKKITYACRKTLADSRPRVQGRF 220
+YR KR QRNF K I YACRKTLAD+RPRV+GRF
Sbjct: 197 SKYRAKRTQRNFTKTIKYACRKTLADNRPRVRGRF 231
>AT1G04500.1 | chr1:1221757-1224235 REVERSE LENGTH=387
Length = 386
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 39/59 (66%), Positives = 45/59 (76%)
Query: 162 IQEVGGPFSQKVGRYSAEERKERIERYRVKRQQRNFHKKITYACRKTLADSRPRVQGRF 220
I + P KVG+ SAE+RKE+I RY KR +RNF KKI YACRKTLADSRPRV+GRF
Sbjct: 269 ITGLDDPSFNKVGKLSAEQRKEKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRF 327
>AT2G33350.1 | chr2:14134116-14136836 FORWARD LENGTH=411
Length = 410
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 36/49 (73%), Positives = 42/49 (85%)
Query: 172 KVGRYSAEERKERIERYRVKRQQRNFHKKITYACRKTLADSRPRVQGRF 220
KVG+ S E+RKE+I RY KR +RNF+KKI YACRKTLADSRPRV+GRF
Sbjct: 302 KVGKLSPEQRKEKIRRYMKKRNERNFNKKIKYACRKTLADSRPRVRGRF 350
>AT3G12890.1 | chr3:4099223-4100277 FORWARD LENGTH=252
Length = 251
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/49 (71%), Positives = 39/49 (79%)
Query: 172 KVGRYSAEERKERIERYRVKRQQRNFHKKITYACRKTLADSRPRVQGRF 220
KVGRYS EERK+RI RY K+ QRNF+K I Y CRKTLAD R RV+GRF
Sbjct: 130 KVGRYSVEERKDRIMRYLKKKNQRNFNKTIKYVCRKTLADRRVRVRGRF 178
>AT5G53420.1 | chr5:21673683-21675469 FORWARD LENGTH=265
Length = 264
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 52/89 (58%), Gaps = 16/89 (17%)
Query: 132 LRRVFSTGDLQAMNVXXXXXXXXXFSGDICIQEVGGPFSQKVGRYSAEERKERIERYRVK 191
+RR FS GD+Q + V P + + ++E+R+E++ RY+ K
Sbjct: 185 MRRAFSEGDIQKLGAGL----------------VQSPLDRIIVSCTSEDRREKLSRYKNK 228
Query: 192 RQQRNFHKKITYACRKTLADSRPRVQGRF 220
+ +RNF +KI YACRK LADS+PRV+GRF
Sbjct: 229 KSRRNFGRKIKYACRKALADSQPRVRGRF 257
>AT4G27900.1 | chr4:13890858-13892777 FORWARD LENGTH=262
Length = 261
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 54/89 (60%), Gaps = 13/89 (14%)
Query: 132 LRRVFSTGDLQAMNVXXXXXXXXXFSGDICIQEVGGPFSQKVGRYSAEERKERIERYRVK 191
+RR FS D+Q + +G+ + V + + ++E+R+E++ RYR K
Sbjct: 178 MRRAFSESDIQTLG-----------TGNTGL--VQSQLDRIIISCTSEDRREKLSRYRNK 224
Query: 192 RQQRNFHKKITYACRKTLADSRPRVQGRF 220
+ +RNF +KI YACRK LADS+PR++GRF
Sbjct: 225 KSKRNFGRKIKYACRKALADSQPRIRGRF 253
>AT3G02380.1 | chr3:487438-488624 REVERSE LENGTH=348
Length = 347
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%)
Query: 162 IQEVGGPFSQKVGRYSAEERKERIERYRVKRQQRNFHKKITYACRKTLADSRPRVQGRF 220
I ++ GP +Q V + + ER+ R+ RYR K++ R F K I YA RK A+ RPR++GRF
Sbjct: 259 IDQLSGPPTQVVQQLTPMEREARVLRYREKKKTRKFDKTIRYASRKAYAEIRPRIKGRF 317
>AT5G59990.1 | chr5:24151206-24153084 REVERSE LENGTH=242
Length = 241
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 41/49 (83%)
Query: 172 KVGRYSAEERKERIERYRVKRQQRNFHKKITYACRKTLADSRPRVQGRF 220
K +YS EE+KE+IE+YR KR RNF+K+I Y CRKTLADSRPR++GRF
Sbjct: 154 KAYKYSPEEKKEKIEKYRSKRNLRNFNKRIKYECRKTLADSRPRIRGRF 202
>AT5G24930.1 | chr5:8589325-8590949 FORWARD LENGTH=407
Length = 406
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 35/53 (66%)
Query: 168 PFSQKVGRYSAEERKERIERYRVKRQQRNFHKKITYACRKTLADSRPRVQGRF 220
P +Q+ ++ ER+ R+ RYR KR+ R F K I YA RK A+ RPR++GRF
Sbjct: 326 PGTQRAVPLTSAEREARVMRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRF 378
>AT5G57660.1 | chr5:23355573-23356729 FORWARD LENGTH=356
Length = 355
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 32/44 (72%)
Query: 177 SAEERKERIERYRVKRQQRNFHKKITYACRKTLADSRPRVQGRF 220
S+ +R+ R+ RYR KR+ R F K I YA RK A+SRPR++GRF
Sbjct: 281 SSMDREARVLRYREKRKNRKFEKTIRYASRKAYAESRPRIKGRF 324
>AT2G24790.1 | chr2:10566959-10567946 FORWARD LENGTH=295
Length = 294
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 31/46 (67%)
Query: 175 RYSAEERKERIERYRVKRQQRNFHKKITYACRKTLADSRPRVQGRF 220
+ S ER+ R+ RYR KR+ R F K I YA RK A+ RPR++GRF
Sbjct: 223 QLSPAEREARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRF 268
>AT5G61380.1 | chr5:24675540-24678176 FORWARD LENGTH=619
Length = 618
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 35/55 (63%)
Query: 166 GGPFSQKVGRYSAEERKERIERYRVKRQQRNFHKKITYACRKTLADSRPRVQGRF 220
G P S +V + R+E + ++R KR QR F KKI Y RK LA+ RPRV+G+F
Sbjct: 518 GNPPSNEVRVNKLDRREEALLKFRRKRNQRCFDKKIRYVNRKRLAERRPRVKGQF 572
>AT5G15840.1 | chr5:5171343-5172697 REVERSE LENGTH=374
Length = 373
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 162 IQEVGGPFSQ--KVGRYSAEERKERIERYRVKRQQRNFHKKITYACRKTLADSRPRVQGR 219
+++ P SQ V + S +R+ R+ RYR KR+ R F K I YA RK A+ RPRV GR
Sbjct: 285 VEQQPDPASQMITVTQLSPMDREARVLRYREKRKTRKFEKTIRYASRKAYAEIRPRVNGR 344
Query: 220 F 220
F
Sbjct: 345 F 345
>AT5G15850.1 | chr5:5176297-5177473 REVERSE LENGTH=356
Length = 355
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%)
Query: 177 SAEERKERIERYRVKRQQRNFHKKITYACRKTLADSRPRVQGRF 220
S +R+ R+ RYR K++ R F K I YA RK A+ RPR++GRF
Sbjct: 282 SPRDREARVLRYREKKKMRKFEKTIRYASRKAYAEKRPRIKGRF 325
>AT1G49130.1 | chr1:18174741-18175936 REVERSE LENGTH=327
Length = 326
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 29/41 (70%)
Query: 180 ERKERIERYRVKRQQRNFHKKITYACRKTLADSRPRVQGRF 220
ER+ R+ RYR KR+ R F KKI Y RK AD RPR++GRF
Sbjct: 277 EREARVWRYRDKRKNRLFEKKIRYEVRKVNADKRPRMKGRF 317
>AT2G46790.1 | chr2:19232874-19234901 FORWARD LENGTH=469
Length = 468
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 33/46 (71%)
Query: 175 RYSAEERKERIERYRVKRQQRNFHKKITYACRKTLADSRPRVQGRF 220
R+S +R+ + ++R+KR+ R F KK+ Y RK LA+ RPRV+G+F
Sbjct: 411 RWSRSQREAALMKFRLKRKDRCFDKKVRYQSRKKLAEQRPRVKGQF 456
>AT1G73870.1 | chr1:27779214-27780522 FORWARD LENGTH=393
Length = 392
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 29/41 (70%)
Query: 180 ERKERIERYRVKRQQRNFHKKITYACRKTLADSRPRVQGRF 220
ER+ R+ RY+ KR+ R F KKI Y RK A+ RPR++GRF
Sbjct: 344 EREARVLRYKEKRRTRLFSKKIRYEVRKLNAEQRPRIKGRF 384
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.134 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,065,238
Number of extensions: 160601
Number of successful extensions: 383
Number of sequences better than 1.0e-05: 19
Number of HSP's gapped: 380
Number of HSP's successfully gapped: 19
Length of query: 324
Length of database: 11,106,569
Length adjustment: 99
Effective length of query: 225
Effective length of database: 8,392,385
Effective search space: 1888286625
Effective search space used: 1888286625
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 112 (47.8 bits)