BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0462500 Os05g0462500|AK064348
(458 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G09570.1 | chr3:2940524-2941843 FORWARD LENGTH=440 456 e-129
AT5G18520.1 | chr5:6145027-6146349 FORWARD LENGTH=441 454 e-128
AT5G42090.1 | chr5:16826830-16828149 FORWARD LENGTH=440 368 e-102
AT5G02630.1 | chr5:591798-593084 FORWARD LENGTH=429 367 e-102
>AT3G09570.1 | chr3:2940524-2941843 FORWARD LENGTH=440
Length = 439
Score = 456 bits (1174), Expect = e-129, Method: Compositional matrix adjust.
Identities = 227/416 (54%), Positives = 292/416 (70%), Gaps = 26/416 (6%)
Query: 27 EIRTEAFREDPRPTILFEKFGFSKTGAVRIVITGAGISSTFARP--DPKQLGFFLLSDES 84
EI++ +D RP ILFEKFGF+++G V + I+ + S+ + P DP +LGFFL+S+ES
Sbjct: 24 EIKSLTISDDSRPMILFEKFGFTQSGHVSVSISSVAVVSSSSDPIPDPSRLGFFLMSEES 83
Query: 85 MFQAIYXXXXXXXXXXXXXXXXXXXDEPDVSRCILTSPYVKTLFTFHDLK---RGHYNKT 141
+ Q + E + + C+L S YV LFTFHDL Y
Sbjct: 84 LLQVVLEI------------------EQNPNFCVLDSNYVLHLFTFHDLSPPPGSKYEHL 125
Query: 142 FPVTHPDEYSLYFANCAPESLVTMRVRTEMYNGNADGSVDYLPVGQAPVPXXXXXXXXXX 201
+PV P+EYSL+F NC PE+ ++M+VRTEMYN + +GS DYLP G +P
Sbjct: 126 YPVMSPNEYSLFFVNCVPETKISMKVRTEMYNLDPNGSKDYLPAGSTRLPGLYFFFSLGY 185
Query: 202 XXXXXXXXXLTLSSRDHRAAAHQIHHLMSGLLAARLLYCLSAAEDQHYIRVTGTPHGWDV 261
+ ++ H+IH LM+ LL + L + AAED+HY++VTGTPHGWDV
Sbjct: 186 LAFLGLWGY---ACWVNKRVVHRIHVLMAALLLMKALNLICAAEDKHYVKVTGTPHGWDV 242
Query: 262 AFYLFQLVKGVVLFAVIVLVGTGWSFLRPVLQDREKKVLMVVIPLQVMANIASAVIGETG 321
FY+FQ ++ V+LF VIVL+GTGWSFL+P LQ++EK VLMVV+PLQV+ANIAS VIGETG
Sbjct: 243 LFYIFQFIRVVLLFTVIVLIGTGWSFLKPFLQEKEKNVLMVVVPLQVLANIASIVIGETG 302
Query: 322 PFLQGWVTWNQILLFVDVACCCAVLFPVVWSMRSLRETSKTDGKAARTLSKLTLFRQFYI 381
PF++ WVTWNQI L VD+ CCCA+LFP+VWS+RSLRETSKTDGKAAR L+KLTLFRQFYI
Sbjct: 303 PFIKDWVTWNQIFLLVDIVCCCAILFPIVWSIRSLRETSKTDGKAARNLAKLTLFRQFYI 362
Query: 382 VVIGYLYFTRIVVYALKTIASYQFRWVSVLAEEVATLAFYLFMFYTFRPAERSRYF 437
VVIGYLYFTRIVV+ALKTIA+Y++RWVS AEE+A+LAFY+ MFY FRP E++ YF
Sbjct: 363 VVIGYLYFTRIVVFALKTIAAYKYRWVSNAAEEIASLAFYMLMFYMFRPVEKNEYF 418
>AT5G18520.1 | chr5:6145027-6146349 FORWARD LENGTH=441
Length = 440
Score = 454 bits (1169), Expect = e-128, Method: Compositional matrix adjust.
Identities = 222/417 (53%), Positives = 295/417 (70%), Gaps = 26/417 (6%)
Query: 27 EIRTEAFREDPRPTILFEKFGFSKTGAVRIVITGAGISSTFARPDPK--QLGFFLLSDES 84
EI++ +D RP ILFEKFGF+ TG V + I+ + ST + P+P+ +LGFFLLS+ES
Sbjct: 25 EIKSLVISDDARPMILFEKFGFTHTGHVTVSISSVSVVSTSSDPNPEASRLGFFLLSEES 84
Query: 85 MFQAIYXXXXXXXXXXXXXXXXXXXDEPDVSRCILTSPYVKTLFTFHDLK---RGHYNKT 141
+ Q + + + C+L S YV LFTF DL +N++
Sbjct: 85 LLQVLLEI------------------QQNPRFCVLDSHYVTHLFTFRDLSPPPNSRFNQS 126
Query: 142 FPVTHPDEYSLYFANCAPESLVTMRVRTEMYNGNADGSVDYLPVGQAPVPXXXXXXXXXX 201
+PVT P+EYSL+FANC PE+ V+M VRTEMYN + +GS DYLP G +P
Sbjct: 127 YPVTSPNEYSLFFANCVPETKVSMAVRTEMYNKDPNGSKDYLPAGSTQLPTLYSFFFLCY 186
Query: 202 XXXXXXXXXLTLSSRDHRAAAHQIHHLMSGLLAARLLYCLSAAEDQHYIRVTGTPHGWDV 261
+ + ++ H+IH LM+GLL + L + AAED+HY+++TGTPHGWD+
Sbjct: 187 VAFLGF---WSYTCWTNKQTVHRIHLLMAGLLLIKSLNLICAAEDKHYVKITGTPHGWDI 243
Query: 262 AFYLFQLVKGVVLFAVIVLVGTGWSFLRPVLQDREKKVLMVVIPLQVMANIASAVIGETG 321
FY+FQ ++ V+LF VI+L+GTGWSFL+P LQ++EK VL++VIPLQV+ANIAS VIGETG
Sbjct: 244 LFYIFQFIRVVLLFTVIILIGTGWSFLKPFLQEKEKNVLIIVIPLQVLANIASIVIGETG 303
Query: 322 PFLQGWVTWNQILLFVDVACCCAVLFPVVWSMRSLRETSKTDGKAARTLSKLTLFRQFYI 381
PF++ WVTWNQ+ L VD+ CCCA++FP+VWS+RSLRETSKTDGKAAR LSKLTLFRQFYI
Sbjct: 304 PFIKDWVTWNQVFLLVDIICCCAIIFPIVWSIRSLRETSKTDGKAARNLSKLTLFRQFYI 363
Query: 382 VVIGYLYFTRIVVYALKTIASYQFRWVSVLAEEVATLAFYLFMFYTFRPAERSRYFS 438
VVIGYLYFTRIVV+ALKTIA+Y+++WVS AEE+ +L FY+ MF+ FRP E++ YF+
Sbjct: 364 VVIGYLYFTRIVVFALKTIAAYKYQWVSFAAEEIVSLVFYVIMFHMFRPEEKNEYFA 420
>AT5G42090.1 | chr5:16826830-16828149 FORWARD LENGTH=440
Length = 439
Score = 368 bits (944), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/415 (46%), Positives = 253/415 (60%), Gaps = 25/415 (6%)
Query: 27 EIRTEAFREDPRPTILFEKFGFSKTGAVRIVITGAGISSTFARPDPKQLGFFLLSDESMF 86
EIR R D RP I ++FGF+ +G + + + +S++ D ++GFFL + ++
Sbjct: 24 EIRKSEIRSDDRPIIPLDEFGFTHSGRLELDASKIWLSNSNPDLDLSKVGFFLCTRDAWV 83
Query: 87 QAIYXXXXXXXXXXXXXXXXXXXDEPDVSRCILTSPYVKTLFTFHDLKRG---HYNKTFP 143
I +E +++ C L S VK +FTF++LK G ++ F
Sbjct: 84 HVI-----------------QQLEEEEIT-CALQSDLVKHVFTFNNLKGGDKSRFSTVFT 125
Query: 144 VTHPDEYSLYFANCAPESLVTMRVRTEMYN-GNADGSVDYLPVGQAPVPXXXXXXXXXXX 202
D+YSL FANC + ++M VR+ MYN G DYL G+ +P
Sbjct: 126 ENDADQYSLVFANCLQQVKISMDVRSAMYNLEGKKGGRDYLSAGRTVLPKVYFLFSVIYF 185
Query: 203 XXXXXXXXLTLSSRDHRAAAHQIHHLMSGLLAARLLYCLSAAEDQHYIRVTGTPHGWDVA 262
+ R IH M G++ + L L AED+ YI+ TGT HGWDV
Sbjct: 186 SLAATWIYVLYKKR---LTVFAIHFFMLGVVVLKALNLLCEAEDKSYIKKTGTAHGWDVL 242
Query: 263 FYLFQLVKGVVLFAVIVLVGTGWSFLRPVLQDREKKVLMVVIPLQVMANIASAVIGETGP 322
FY+F +KG+ LF +IVL+GTGWSFL+P LQD+EKKVLM+VIPLQV+AN A VI ETGP
Sbjct: 243 FYIFNFLKGITLFTLIVLIGTGWSFLKPYLQDKEKKVLMIVIPLQVVANFAQVVIDETGP 302
Query: 323 FLQGWVTWNQILLFVDVACCCAVLFPVVWSMRSLRETSKTDGKAARTLSKLTLFRQFYIV 382
+ Q WVTW QI L VDV CCCAVLFP+VWS+++LRE +KTDGKAA L KLTLFRQ+YIV
Sbjct: 303 YGQDWVTWKQIFLLVDVVCCCAVLFPIVWSIKNLREAAKTDGKAAVNLVKLTLFRQYYIV 362
Query: 383 VIGYLYFTRIVVYALKTIASYQFRWVSVLAEEVATLAFYLFMFYTFRPAERSRYF 437
VI Y+YFTR+VVYAL+TI SY++ W SV+A E+ATLAFYLF Y FRP + YF
Sbjct: 363 VICYIYFTRVVVYALETITSYKYMWTSVVASELATLAFYLFTGYKFRPEVHNPYF 417
>AT5G02630.1 | chr5:591798-593084 FORWARD LENGTH=429
Length = 428
Score = 367 bits (941), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/414 (44%), Positives = 260/414 (62%), Gaps = 27/414 (6%)
Query: 27 EIRTEAFREDPRPTILFEKFGFSKTGAVRIVITGAGISSTFARPDPKQLGFFLLSDESMF 86
EI++ D RP IL EKFG + G V + ++ + S D +LGFF+LS+ES+
Sbjct: 23 EIKSFTISNDSRPVILLEKFGIIEIGHVTVSVSSVSVLSPIL--DSSKLGFFVLSEESLP 80
Query: 87 QAIYXXXXXXXXXXXXXXXXXXXDEPDVSRCILTSPYVKTLFTFHDLK---RGHYNKTFP 143
+ + + S C+L S Y+ FTF DL R ++K++P
Sbjct: 81 HVLLEL------------------QQNFSFCVLDSHYILHFFTFVDLSPPPRSQFSKSYP 122
Query: 144 VTHPDEYSLYFANCAPESLVTMRVRTEMYNG-NADGSVDYLPVGQAPVPXXXXXXXXXXX 202
+T P++YSL+FANC PE+ V+M+V TE+Y+ +GS DYL G A +P
Sbjct: 123 ITSPNDYSLFFANCVPETRVSMKVHTEIYHDLYPNGSRDYLLAGSAQLPGLYLVFFLCYL 182
Query: 203 XXXXXXXXLTLSSRDHRAAAHQIHHLMSGLLAARLLYCLSAAEDQHYIRVTGTPHGWDVA 262
+H+ +IH LM+ LL + L + AA +HY++VTGT HGW++
Sbjct: 183 SFLCFWLCF---CWNHKQIVKRIHLLMTALLLVKSLTLICAAVYKHYVKVTGTAHGWNIV 239
Query: 263 FYLFQLVKGVVLFAVIVLVGTGWSFLRPVLQDREKKVLMVVIPLQVMANIASAVIGETGP 322
FY+FQ + V+LF VIVL+G GWSFL+P L +EKK+L++V+PLQV+ANIAS VIGETGP
Sbjct: 240 FYIFQFISVVLLFMVIVLIGNGWSFLKPKLHVKEKKLLVIVVPLQVLANIASIVIGETGP 299
Query: 323 FLQGWVTWNQILLFVDVACCCAVLFPVVWSMRSLRETSKTDGKAARTLSKLTLFRQFYIV 382
+ Q WV+WNQI D+ CCCA++F +VWSM LRETSKTDGKA + L+KL + R+FY++
Sbjct: 300 YTQDWVSWNQIFFLADITCCCAIVFAMVWSMCCLRETSKTDGKAVKNLAKLPVLRKFYVL 359
Query: 383 VIGYLYFTRIVVYALKTIASYQFRWVSVLAEEVATLAFYLFMFYTFRPAERSRY 436
VIGYL+FTRIVV +K A + ++WVS AEE+ATL+FY MFY FRP E++ Y
Sbjct: 360 VIGYLFFTRIVVVVMKMKADFTYQWVSNAAEEIATLSFYCLMFYMFRPIEKNEY 413
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.328 0.140 0.432
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,709,843
Number of extensions: 277686
Number of successful extensions: 711
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 697
Number of HSP's successfully gapped: 4
Length of query: 458
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 356
Effective length of database: 8,310,137
Effective search space: 2958408772
Effective search space used: 2958408772
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 113 (48.1 bits)