BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0443300 Os05g0443300|Os05g0443300
(761 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G27460.1 | chr2:11740670-11744867 FORWARD LENGTH=746 941 0.0
AT3G07100.1 | chr3:2245689-2250077 REVERSE LENGTH=1039 88 1e-17
AT3G44340.1 | chr3:16011923-16019873 REVERSE LENGTH=1097 72 8e-13
AT4G32640.1 | chr4:15742661-15750424 FORWARD LENGTH=1081 65 1e-10
>AT2G27460.1 | chr2:11740670-11744867 FORWARD LENGTH=746
Length = 745
Score = 941 bits (2433), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 472/762 (61%), Positives = 567/762 (74%), Gaps = 23/762 (3%)
Query: 1 MAARATFSRFPVTAEALEACAVQWGIAVTPFAAADERGQAPAAGAGGDRVPRCEHCWAYL 60
MA RAT SRFP+ ++A EA + WG+ VTPFAA DE G PA G+ G +PRCE+C+AY
Sbjct: 1 MAVRATVSRFPIDSDAQEASGLPWGLTVTPFAAKDENGIGPACGSNGHLLPRCENCYAYF 60
Query: 61 NSHCDMERWGWSCALCGTLNGFDDDALRRLQHPEGWPELTSSFVDLEIPVDGSEGAGDGV 120
N++C++++W W+C+LCGTLNG DA+ R +P PE+TSSF+DLE+P+DGSE +
Sbjct: 61 NTYCELDQWAWNCSLCGTLNGLPSDAIARYSNPHSIPEMTSSFIDLEMPLDGSEE--EMT 118
Query: 121 QARPVYVAAVDLACSEEFLELIKSALLAALEALIPGSLFGLMTFSHKIGLYDVQGPIPVV 180
QARPVYVAA+D++ SEEFLEL KSALLAALEAL PG+LFGL+TFSHKIGLYDVQGPIPVV
Sbjct: 119 QARPVYVAAIDISSSEEFLELTKSALLAALEALSPGALFGLVTFSHKIGLYDVQGPIPVV 178
Query: 181 KNVFIPPDTEEDGLPVALEDAMPLLSFLAPIDTCKDRIAAALDTLRPTSSWERGAASGQE 240
KNVFIPPD E L + LED MPLL FLAP++TCKDRIAAAL+TLRP +SWER A +GQ
Sbjct: 179 KNVFIPPDGES-SLSLELEDVMPLLQFLAPVETCKDRIAAALETLRPITSWERSAGAGQG 237
Query: 241 PDTVLLGGRGFGTAMSALTDYLSSEYGTTFALGMPNYIFFLKKIQTARVFAFLSGAPDYG 300
D+VL+GGRGFGTAM AL +YL SE+G TFAL ARVFAFLSG PDYG
Sbjct: 238 MDSVLMGGRGFGTAMEALFNYLGSEFGNTFAL--------------ARVFAFLSGPPDYG 283
Query: 301 DGQLDTRRYGEQYASKGEDPDLALLPEQIPFYKDLAAVAVQAGVCVDIFAITDEYTDLAS 360
GQLDT RYGEQYASK D D ALLPEQ PFYKDLA +AVQ+GVCVD+FA+T+EYTDLAS
Sbjct: 284 RGQLDTSRYGEQYASKRVDADRALLPEQTPFYKDLATIAVQSGVCVDLFAVTNEYTDLAS 343
Query: 361 LKFLSIESGGSLFLYTNTDDSTLPQDIYRLLSRPYAFGCVLRLRTSSDFEPGNSYGHFFP 420
LKFLSIESGGSLFLY++TDDSTLPQD++R+L+RPYAF CVLRLRTS++F+PGNS+GHFFP
Sbjct: 344 LKFLSIESGGSLFLYSSTDDSTLPQDMFRMLNRPYAFNCVLRLRTSTEFKPGNSFGHFFP 403
Query: 421 DPQYEHVQHIICCDSFATYAYDFNFSHPEGFSRHT-DPAVVQIAFQYSVIEPVKHXXXXX 479
DPQYE++QHIICCDS+ATYAYDF F+ GFSRH+ + VVQIAFQY+V+ P +
Sbjct: 404 DPQYENLQHIICCDSYATYAYDFEFADNTGFSRHSGEQPVVQIAFQYTVVVPPEGLSNSE 463
Query: 480 XXXXXXXMFCLKRRLRIRTLQYRPAKNINEIYDSVDPETXXXXXXXXXXXXXXDKGVKEG 539
L+RRLRIRT+Q+ A NINEIYDSVD E + GV+EG
Sbjct: 464 MSSSSRGKHTLQRRLRIRTMQFGTAHNINEIYDSVDHEVVLSLLVHKVILASLEDGVREG 523
Query: 540 RSLVHDWLSLLIARYNQAL-----RSDARIPESHVDVDFXXXXXXXXXXXXVFALLRNPL 594
R+L+HDWL +L A+YN A ++ + S +D+ F VFALLRNPL
Sbjct: 524 RALLHDWLVILTAQYNDAFNLVQYKNGNKSMSSQIDITFSQCPQLEPLPRLVFALLRNPL 583
Query: 595 LQLHEEGIHPDYRIYLQCLFSALEPSSLAKAIYPVLVSYSSPDKQAFPRHTLSRAALIMS 654
L+ HEEG+HPDYRIYLQCLFS L+PSSL IYP L+SYS+PD A+PRH+LSRAALI S
Sbjct: 584 LRFHEEGVHPDYRIYLQCLFSVLDPSSLHCGIYPALMSYSTPDTLAYPRHSLSRAALITS 643
Query: 655 ESPIFLLDAFTNLIVYYXXXXXXXXXXXXXHDCLLRTMVNELKQGRCITPKLTFIHGGRE 714
SPIF LDA+T LIV+Y DCLLR +N++KQ R ITPKL FI GGR+
Sbjct: 644 GSPIFFLDAYTTLIVFYSSTADPSIPFPPPQDCLLRQTINKVKQERSITPKLVFIRGGRD 703
Query: 715 DPALFERYLIEEQDVDGTGFTSGKGFVSFRESIRHAATDIIE 756
D +FE YLIEEQDVDG GF S GFVSF + I T+ ++
Sbjct: 704 DATVFENYLIEEQDVDGNGFASAMGFVSFLDDISQRVTEYMK 745
>AT3G07100.1 | chr3:2245689-2250077 REVERSE LENGTH=1039
Length = 1038
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 98/433 (22%), Positives = 168/433 (38%), Gaps = 63/433 (14%)
Query: 4 RATFSRFPVTAEALEACAVQWGIAVTPFAAADERGQAPAAGAGGDRVPRCEHCWAYLNSH 63
R T S P + + G V P A E + P G + RC C Y+N
Sbjct: 322 RLTTSAIPNSQSLASRWHLPLGAVVCPLAETPEGEEVPLIDFGSTGIIRCRRCRTYVNPF 381
Query: 64 CDMERWG--WSCALCGTLNGFDD------DALRRLQHPEGWPELTSSFVDLEIPVDGSEG 115
G W C +C LN DA R + PELT V++ P +
Sbjct: 382 VTFTDSGRKWRCNICSMLNDVPGEYFSHLDATGRRMDMDQRPELTKGSVEIIAPTEYMVR 441
Query: 116 AGDGVQARPVYVAAVDLACSEE---FLELIKSALLAALEAL--IPGSLFGLMTFSHKIGL 170
P+Y +D++ S LE++ + + L+ L P + G +T+ +
Sbjct: 442 P----PMPPIYFFLIDVSISATKSGMLEVVAQTIKSCLDNLPGYPRTQIGFITYDSTLHF 497
Query: 171 YDVQGPIPVVKNVFIPPDTEEDGLPVALEDAMPLLSFLAPIDTCKDRIAAALDTLRPTSS 230
Y+++ + + + + ++ D + V L D + L + + + A LD+L
Sbjct: 498 YNMKSSLSQPQMMVV---SDLDDIFVPLPDDL-----LVNLSESRTVVDAFLDSLPLMFQ 549
Query: 231 WERGAASGQEPDTVLLGGRGFGTAMSALTDYLSSEYGTTFALGMPNYIFFLKKIQTARVF 290
S FG A+ A F + ++
Sbjct: 550 DNFNVESA------------FGPALRA--------------------AFMVMNQLGGKLL 577
Query: 291 AFLSGAPDYGDGQLDTRRYGEQYASKGEDPDLALLPEQIPFYKDLAAVAVQAGVCVDIFA 350
F + P G G+L R G+ G D + AL + PFYK +AA + + ++++A
Sbjct: 578 IFQNSLPSLGAGRLKLR--GDDPRVYGTDKEYALRVAEDPFYKQMAADCTKFQIGINVYA 635
Query: 351 ITDEYTDLASLKFLSIESGGSLFLYTNTDDST----LPQDIYRLLSRPYAFGCVLRLRTS 406
+D+YTD+ASL L+ +GG ++ Y S L ++ R L+R A+ V+R+R
Sbjct: 636 FSDKYTDIASLGTLAKYTGGQVYYYPGFQSSVHGDKLRHELARDLTRETAWEAVMRIRCG 695
Query: 407 SDFEPGNSYGHFF 419
+ +G+F
Sbjct: 696 KGIRFSSYHGNFM 708
>AT3G44340.1 | chr3:16011923-16019873 REVERSE LENGTH=1097
Length = 1096
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 106/447 (23%), Positives = 168/447 (37%), Gaps = 89/447 (19%)
Query: 4 RATFSRFPVTAEALEACAVQWGIAVTPFAAADERGQAPAAGAGGDRVP-RCEHCWAYLNS 62
R T ++ P T + L +Q + V P A + + G+ P RC C Y+N
Sbjct: 383 RCTINQIPCTVDLLSTSGMQLALIVQPMALSHPSEEPIQVVDFGESGPVRCSRCKGYVNP 442
Query: 63 HCDMERWG--WSCALCGTLNGFDDDALRRLQ---HPEGW-------PELTSSFVDLEIPV 110
G + C LCG + D+ R Q P+G PEL VD V
Sbjct: 443 FMKFIDQGRKFICNLCG----YTDETPRDYQCNLGPDGRRRDADERPELCRGTVDF---V 495
Query: 111 DGSE-GAGDGVQARPVYVAAVDLACSEEFLELIKSALLAALEALI-----PGSLFGLMTF 164
E D + A VY +D++ + +A A + L P + G+ TF
Sbjct: 496 ATKEYMVRDPMPA--VYFFLIDVSMNAIQTGATAAACSAIQQVLSDLPEGPRTFVGIATF 553
Query: 165 SHKIGLYDV----QGP----IPVVKNVFIPPDTEEDGLPVALEDAMPLLSFLAPIDTCKD 216
I Y++ Q P +P V++V+ P +T+ + + C+
Sbjct: 554 DSTIHFYNLKRALQQPLMLIVPDVQDVYTPLETD----------------VIVQLSECRQ 597
Query: 217 RIAAALDTLRPTSSWERGAASGQEPDTVLLGGRGFGTAMSALTDYLSSEYGTTFALGMPN 276
+ L+++ PT E + P++ FG A+ A
Sbjct: 598 HLEILLESI-PTMFQE-----SKSPESA------FGAAVKA------------------- 626
Query: 277 YIFFLKKIQTARVFAFLSGAPDYGDGQLDTRRY-GEQYASKGEDPDLALLPEQIPFYKDL 335
F K ++ F S P G G L +R G AS GE LL + +
Sbjct: 627 -AFLAMKSTGGKLMVFQSVLPSVGIGALSSREADGRANASAGEKEAHKLLQPADKTLRTM 685
Query: 336 AAVAVQAGVCVDIFAITDEYTDLASLKFLSIESGGSLFLY----TNTDDSTLPQDIYRLL 391
A + VCVD+F T Y D+AS+ + +GG ++ Y +D L D+ +
Sbjct: 686 AIEFAEYQVCVDLFITTQAYVDMASISEIPRTTGGQVYCYYPFSALSDPPKLYNDLRWNI 745
Query: 392 SRPYAFGCVLRLRTSSDFEPGNSYGHF 418
+RP F V+R+R S + G+F
Sbjct: 746 TRPQGFEAVMRVRCSQGIQVQEYSGNF 772
>AT4G32640.1 | chr4:15742661-15750424 FORWARD LENGTH=1081
Length = 1080
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 106/449 (23%), Positives = 167/449 (37%), Gaps = 93/449 (20%)
Query: 4 RATFSRFPVTAEALEACAVQWGIAVTPFA---AADERGQAPAAGAGGDRVPRCEHCWAYL 60
R T ++ P T + L +Q + V P A ++E Q G GG RC C Y+
Sbjct: 380 RCTINQIPCTVDLLSTSGMQLALMVQPLALSHPSEEPIQVVDFGEGGPV--RCSRCKGYI 437
Query: 61 NSHCDMERWG--WSCALCGTLNGFDDDALR----------RLQHPEGWPELTSSFVDLEI 108
N G + C CG + D+ R R + + PEL V+
Sbjct: 438 NPFMKFIDQGRKFICNFCG----YTDETPRDYHCNLGPDGRRRDVDERPELCRGTVEF-- 491
Query: 109 PVDGSE-GAGDGVQARPVYVAAVDLACSEEFLELIKSALLAALEALI-----PGSLFGLM 162
V E D + A VY +D++ + +A A + L P + G+
Sbjct: 492 -VATKEYMVRDPMPA--VYFFLIDVSMNAIQTGATAAACNAIQQVLSDLPEGPRTFVGIA 548
Query: 163 TFSHKIGLYDV----QGP----IPVVKNVFIPPDTEEDGLPVALEDAMPLLSFLAPIDTC 214
TF I Y++ Q P +P V++V+ P +T+ + + C
Sbjct: 549 TFDSTIHFYNLKRALQQPLMLIVPDVQDVYTPLETD----------------VVVQLSEC 592
Query: 215 KDRIAAALDTLRPTSSWERGAASGQEPDTVLLGGRGFGTAMSALTDYLSSEYGTTFALGM 274
+ + LD++ PT E + P++ FG A+ A
Sbjct: 593 RQHLELLLDSI-PTMFQE-----SKIPESA------FGAAVKA----------------- 623
Query: 275 PNYIFFLKKIQTARVFAFLSGAPDYGDGQLDTRRY-GEQYASKGEDPDLALLPEQIPFYK 333
F K + ++ F S G G L +R G S GE LL K
Sbjct: 624 ---AFLAMKSKGGKLMVFQSILCSVGVGALSSREAEGRANMSAGEKEAHKLLQPADKTLK 680
Query: 334 DLAAVAVQAGVCVDIFAITDEYTDLASLKFLSIESGGSLFLYTN----TDDSTLPQDIYR 389
+A + VCVDIF T Y D+AS+ + +GG ++ Y +D L D+
Sbjct: 681 TMAIEFAEYQVCVDIFITTQAYVDMASISVIPRTTGGQVYCYYPFSALSDPPKLYNDLKW 740
Query: 390 LLSRPYAFGCVLRLRTSSDFEPGNSYGHF 418
++RP F V+R+R S + G+F
Sbjct: 741 NITRPQGFEAVMRVRCSQGIQVQEYSGNF 769
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.322 0.138 0.424
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 16,003,932
Number of extensions: 674380
Number of successful extensions: 1261
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 1251
Number of HSP's successfully gapped: 5
Length of query: 761
Length of database: 11,106,569
Length adjustment: 106
Effective length of query: 655
Effective length of database: 8,200,473
Effective search space: 5371309815
Effective search space used: 5371309815
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 116 (49.3 bits)