BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0430400 Os05g0430400|AK063573
(371 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G02790.1 | chr4:1247416-1249351 FORWARD LENGTH=373 464 e-131
AT2G41670.1 | chr2:17374118-17376177 FORWARD LENGTH=387 98 7e-21
AT3G07050.1 | chr3:2229602-2232279 REVERSE LENGTH=583 83 3e-16
AT1G52980.1 | chr1:19737493-19740201 FORWARD LENGTH=577 74 1e-13
AT2G27200.1 | chr2:11625449-11627959 FORWARD LENGTH=538 72 6e-13
AT4G10650.1 | chr4:6574472-6576231 REVERSE LENGTH=378 69 5e-12
AT1G08410.1 | chr1:2646307-2649106 FORWARD LENGTH=590 60 2e-09
>AT4G02790.1 | chr4:1247416-1249351 FORWARD LENGTH=373
Length = 372
Score = 464 bits (1195), Expect = e-131, Method: Compositional matrix adjust.
Identities = 217/311 (69%), Positives = 258/311 (82%), Gaps = 3/311 (0%)
Query: 60 ERLSHSLYANEDYDKEMFWDNLDADLRYWTRSLRPVQWYPGHIAKTXXXXXXXXXXMDVV 119
+ + L ANED E+ W NL++D+R WTR+LRPVQWYPGHI KT MDVV
Sbjct: 64 DSIGFKLEANED---EIDWMNLESDIRLWTRALRPVQWYPGHIMKTEKELREQLKLMDVV 120
Query: 120 IEVRDARIPLATSHPKMDAWLGNRKRIIVMNREDMVSNEDRNAWASYFANQGTKVVYSNG 179
IEVRDARIPL+T+HPKMDAWLGNRKRI+V+NREDM+SN+DRN WA YFA QG KV+++NG
Sbjct: 121 IEVRDARIPLSTTHPKMDAWLGNRKRILVLNREDMISNDDRNDWARYFAKQGIKVIFTNG 180
Query: 180 QLGMGTMKLGRMAKSLASTVNTKRREKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCP 239
+LGMG MKLGR+AKSLA VN KRREKGLLPR+VRAGI+GYPNVGKSSLINRLLKR++C
Sbjct: 181 KLGMGAMKLGRLAKSLAGDVNGKRREKGLLPRSVRAGIIGYPNVGKSSLINRLLKRKICA 240
Query: 240 AAPRPGVTRELKWVRFGSDLELLDSPGILPMRISDQTAAIKLAICDDIGERSYDFADVAA 299
AAPRPGVTRE+KWV+ G DL+LLDSPG+LPMRI DQ AAIKLAICDDIGE++YDF DVA
Sbjct: 241 AAPRPGVTREMKWVKLGKDLDLLDSPGMLPMRIDDQAAAIKLAICDDIGEKAYDFTDVAG 300
Query: 300 ILVQLLVRHPAVGPEAFRRRYRLDMDSDCGKMFVTKLSVHLFNGDASQAAFRILSDYRKG 359
ILVQ+L R P VG +A RY++ ++ +CGK FV L ++LF GD+ QAAFRIL+D+RKG
Sbjct: 301 ILVQMLARIPEVGAKALYNRYKIQLEGNCGKKFVKTLGLNLFGGDSHQAAFRILTDFRKG 360
Query: 360 KFGCVALERPP 370
KFG V+LERPP
Sbjct: 361 KFGYVSLERPP 371
>AT2G41670.1 | chr2:17374118-17376177 FORWARD LENGTH=387
Length = 386
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 101/210 (48%), Gaps = 24/210 (11%)
Query: 95 VQWYPGHIAKTXXXXXXXXXXMDVVIEVRDARIPLATSHPKMDAWLGNRKRIIVMNREDM 154
+ W+PGH+A D+VIEVRDARIPL++++ + + + ++RII +N++D+
Sbjct: 26 INWFPGHMAAATRAIRNRLKLSDLVIEVRDARIPLSSANEDLQSQMSAKRRIIALNKKDL 85
Query: 155 VSNEDRNAWASYFANQGTKVVYSNGQLGMGTMKLGRMAKSLASTVNTKRREKGLLPRAVR 214
+ N W +F + + N MKL + + V RE LL
Sbjct: 86 ANPNVLNKWTRHFESSKQDCIAINAHSRSSVMKLLDLVELKLKEVIA--REPTLL----- 138
Query: 215 AGIVGYPNVGKSSLINRL-------------LKRRMCPAAPRPGVTRELKWVRFGS--DL 259
+VG PNVGKS+LIN + LKR P PGVT+++ + +
Sbjct: 139 VMVVGVPNVGKSALINSIHQIAAARFPVQERLKR--ATVGPLPGVTQDIAGFKIAHRPSI 196
Query: 260 ELLDSPGILPMRISDQTAAIKLAICDDIGE 289
+LDSPG+L I D +KLA+ + +
Sbjct: 197 YVLDSPGVLVPSIPDIETGLKLALSGSVKD 226
>AT3G07050.1 | chr3:2229602-2232279 REVERSE LENGTH=583
Length = 582
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 97/207 (46%), Gaps = 24/207 (11%)
Query: 117 DVVIEVRDARIPLATSHPKMDAWL----GNRKRIIVMNREDMVSNEDRNAWASYFANQGT 172
DV++EV DAR PL T M+ + N+ ++++N+ D+V E W Y +
Sbjct: 138 DVILEVLDARDPLGTRCTDMERMVMQAGPNKHLVLLLNKIDLVPREAAEKWLMYLREEFP 197
Query: 173 KVVY------SNGQLGMGTMKLGRMAKSLAST------------VNTKRREKGLLPRAVR 214
V + LG + K + + L ++ N R + L +++
Sbjct: 198 AVAFKCSTQEQRSNLGWKSSKASKPSNMLQTSDCLGADTLIKLLKNYSRSHE--LKKSIT 255
Query: 215 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRELKWVRFGSDLELLDSPGILPMRISD 274
GI+G PNVGKSSLIN L + + PG+TR L+ V +++LLD PG++ ++ S
Sbjct: 256 VGIIGLPNVGKSSLINSLKRAHVVNVGATPGLTRSLQEVHLDKNVKLLDCPGVVMLKSSG 315
Query: 275 QTAAIKLAICDDIGERSYDFADVAAIL 301
A+I L C I + + V IL
Sbjct: 316 NDASIALRNCKRIEKLDDPVSPVKEIL 342
>AT1G52980.1 | chr1:19737493-19740201 FORWARD LENGTH=577
Length = 576
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 116/257 (45%), Gaps = 30/257 (11%)
Query: 117 DVVIEVRDARIPLATSHPKMDAWLGNRKR----IIVMNREDMVSNEDRNAWASYFANQGT 172
DV+++V DAR P T ++ L + I+++N+ D+V W + +
Sbjct: 217 DVIVQVIDARDPQGTRCHHLEKTLKEHHKHKHMILLLNKCDLVPAWATKGWLRVLSKEYP 276
Query: 173 KVVYS---NGQLGMGTMKLGRMAKSLASTVNTKRREKGLLPRAVRAGIVGYPNVGKSSLI 229
+ + N G G+ L + + A + K+ A+ G VGYPNVGKSS+I
Sbjct: 277 TLAFHASVNKSFGKGS--LLSVLRQFARLKSDKQ--------AISVGFVGYPNVGKSSVI 326
Query: 230 NRLLKRRMCPAAPRPGVTRELKWVRFGSDLELLDSPGILPMRISDQTAAIKLAICDDIGE 289
N L + +C AP PG T+ +++ + L+D PG++ +T + +
Sbjct: 327 NTLRTKNVCKVAPIPGETKVWQYITLTKRIFLIDCPGVVYQSRDTETDIVLKGVV----- 381
Query: 290 RSYDFADVAAILVQLLVRHPAVGPEAFRRRYRL-DMDSDCGKMF-VTKLSVHLFNG---D 344
R + D + + ++L R V E +R Y++ D + D + + K S L G D
Sbjct: 382 RVTNLEDASEHIGEVLRR---VKKEHLQRAYKIKDWEDDHDFLLQLCKSSGKLLKGGEPD 438
Query: 345 ASQAAFRILSDYRKGKF 361
A IL D+++G+
Sbjct: 439 LMTGAKMILHDWQRGRI 455
>AT2G27200.1 | chr2:11625449-11627959 FORWARD LENGTH=538
Length = 537
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 130/305 (42%), Gaps = 55/305 (18%)
Query: 117 DVVIEVRDARIPLATSHPKMDAWLG----NRKRIIVMNREDMVSNEDRNAWASYFANQGT 172
D+++ V DAR PL P ++A+ ++K ++++N+ D++ + R WA YF+
Sbjct: 169 DLIVMVVDARDPLFYRCPDLEAYAQEIDEHKKTMLLVNKADLLPSYVREKWAEYFSRNNI 228
Query: 173 KVVYSNGQLGMGTMK---LGRMAKSLASTVNTK--------------------------R 203
V+ + + T++ L ++ +T T R
Sbjct: 229 LFVFWSAKAATATLEGKPLKEQWRAPDTTQKTDNPAVKVYGRDDLLDRLKLEALEIVKMR 288
Query: 204 REKGLLPRAVRA-------GIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRELKWVRFG 256
+ +G+ + + G VGYPNVGKSS IN L+ ++ PG T+ + +
Sbjct: 289 KSRGVSATSTESHCEQVVVGFVGYPNVGKSSTINALVGQKRTGVTSTPGKTKHFQTLIIS 348
Query: 257 SDLELLDSPG-ILPMRISDQTAAIKLAICDDIGERSYDFADVAAILVQLLVRHPAVG--- 312
DL L D PG + P S + + + +R + + ++ +L+ RH
Sbjct: 349 EDLMLCDCPGLVFPSFSSSRYEMVASGVLP--IDRMTEHLEAIKVVAELVPRHAIEDVYN 406
Query: 313 -----PEAFRRRYRLDMDSDCGKMFVTKLSVHLFNG--DASQAAFRILSDYRKGKFGCVA 365
P+++ + R + S+ + + +G D ++AA +IL DY +GK A
Sbjct: 407 ISLPKPKSYEPQSRPPLASELLRTYCLSRGYVASSGLPDETRAARQILKDYIEGKLPHFA 466
Query: 366 LERPP 370
+ PP
Sbjct: 467 M--PP 469
>AT4G10650.1 | chr4:6574472-6576231 REVERSE LENGTH=378
Length = 377
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 102/218 (46%), Gaps = 38/218 (17%)
Query: 96 QWYPGHIAKTXXXXXXXXXXMDVVIEVRDARIPLATSHPKMDAWLG-NRKRIIVMNREDM 154
+WY H+A +D V+E+RDARIPL++ + + + KRIIV+N+ ++
Sbjct: 27 RWYGPHMAAAVRAISERIPLVDFVLEIRDARIPLSSEYELLRKFSPLPSKRIIVLNKMEL 86
Query: 155 VSNEDRNAWASYFA--NQGTKVVYSNGQLGMGTMKLGRMAKSLASTVNTKRREKGLLPRA 212
+ YF N + V S+ + K L + + ++ RE L +A
Sbjct: 87 ADPLELKKCIDYFEERNYLSYAVNSHNK---------DCVKQLLNFLQSQVRE---LHKA 134
Query: 213 VRAG------IVGYPNVGKSSLINRLL-----------KRRMCPAAPRPGVTRELKWVRF 255
+G ++G PNVGKS+L N L K + + +PG T+++ ++
Sbjct: 135 GHSGHTTTMMLLGIPNVGKSALSNSLHHIGRISAAEKGKLKHTTVSSQPGDTKDIMSLKI 194
Query: 256 GS--DLELLDSPGILPMRISDQTAAIKL----AICDDI 287
GS ++ +LD+PGI P + D KL AI DDI
Sbjct: 195 GSHPNVYVLDTPGIFPPNLYDAEICAKLALTGAIPDDI 232
>AT1G08410.1 | chr1:2646307-2649106 FORWARD LENGTH=590
Length = 589
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 126/318 (39%), Gaps = 77/318 (24%)
Query: 117 DVVIEVRDARIPLATSHPKMDAWLG----NRKRIIVMNREDMVSNEDRNAWASYFANQGT 172
D+++ V DAR PL P ++A+ ++K ++++N+ D++ + R WA YF
Sbjct: 169 DLIVMVVDARDPLFYRCPDLEAYAQEIDEHKKIMLLVNKADLLPTDVREKWAEYFRLNNI 228
Query: 173 KVVYSNGQLGMGTMK------------------------------LGRMA---------- 192
V+ + T++ L R+
Sbjct: 229 LFVFWSAIAATATLEGKVLKEQWRQPDNLQKTDDPDIMIYGRDELLSRLQFEAQEIVKVR 288
Query: 193 KSLASTVNTKRREKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRELKW 252
S A++V+++ G VGYPNVGKSS IN L+ ++ PG T+ +
Sbjct: 289 NSRAASVSSQSWTGEYQRDQAVVGFVGYPNVGKSSTINALVGQKRTGVTSTPGKTKHFQT 348
Query: 253 VRFGSDLELLDSP-----------------GILPM-RISDQTAAIKLAICDDIGERSYDF 294
+ +L L D P G+LP+ R+++ AI++ + D + R
Sbjct: 349 LIISDELMLCDCPGLVFPSFSSSRYEMIASGVLPIDRMTEHREAIQV-VADKVPRR---- 403
Query: 295 ADVAAILVQLLVRHPAVGPEAFRRRYRLDMDSDCGKMFVTKLSVHLFNG--DASQAAFRI 352
+++ + P+ + R+ R ++ K + +G D ++AA I
Sbjct: 404 ------VIESVYNISLPKPKTYERQSRPPHAAELLKSYCASRGYVASSGLPDETKAARLI 457
Query: 353 LSDYRKGKFGCVALERPP 370
L DY GK A+ PP
Sbjct: 458 LKDYIGGKLPHYAM--PP 473
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.322 0.136 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,399,115
Number of extensions: 292344
Number of successful extensions: 739
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 734
Number of HSP's successfully gapped: 7
Length of query: 371
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 271
Effective length of database: 8,364,969
Effective search space: 2266906599
Effective search space used: 2266906599
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 112 (47.8 bits)