BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0424800 Os05g0424800|AK121054
(358 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G71900.1 | chr1:27061754-27064053 FORWARD LENGTH=344 449 e-126
AT1G34470.1 | chr1:12604574-12606758 FORWARD LENGTH=369 448 e-126
AT4G09640.1 | chr4:6088433-6090604 REVERSE LENGTH=387 419 e-117
AT4G13800.1 | chr4:8002129-8003858 REVERSE LENGTH=337 336 9e-93
AT3G23870.1 | chr3:8620253-8621755 FORWARD LENGTH=336 334 4e-92
AT2G21120.1 | chr2:9052103-9054266 REVERSE LENGTH=329 327 4e-90
AT4G38730.1 | chr4:18080484-18082305 REVERSE LENGTH=327 308 3e-84
>AT1G71900.1 | chr1:27061754-27064053 FORWARD LENGTH=344
Length = 343
Score = 449 bits (1154), Expect = e-126, Method: Compositional matrix adjust.
Identities = 230/345 (66%), Positives = 256/345 (74%), Gaps = 10/345 (2%)
Query: 7 GRW---VEGMSADNVKGLLLALSSSLFIGASFIVXXXXXXXXXXXXXXXXXXXXXXLLEP 63
G W +GMS+DN+KGL+LALSSSLFIGASFIV L EP
Sbjct: 6 GSWRDSYKGMSSDNIKGLVLALSSSLFIGASFIVKKKGLKKAASTGTRAGVGGYSYLYEP 65
Query: 64 LWWAGMTAMIVGEIXXXXXXXXXXXILVTPLGALSIIISAVLAHIILREKLHIFGILGCI 123
LWW GMT M++GEI ILVTPLGA+SIIISAVLAHIILREKLHIFGILGC
Sbjct: 66 LWWIGMTTMLLGEIANFAAYAFAPAILVTPLGAVSIIISAVLAHIILREKLHIFGILGCA 125
Query: 124 LCVVGSTSIVLHAPPERQIESVAEVWDLATEPXXXXXXXXXXXXXXXXXXHFVPQYGQTH 183
LCVVGST+IVLHAP ER+I+SV EVW+LATEP FVPQYGQT+
Sbjct: 126 LCVVGSTTIVLHAPQEREIDSVIEVWNLATEPAFMFYASLVIGAAVFLIIRFVPQYGQTN 185
Query: 184 IMVYIGVCSLVGSLSVMSVKALGIALKLTFSGMNQLVYPQMWVFLLFVVACIVTQMNYLN 243
+MVYIG+CSLVGSLSVMSVKALGIALKLTFSG NQL YPQ W+F L V+ C+VTQ+NYLN
Sbjct: 186 VMVYIGICSLVGSLSVMSVKALGIALKLTFSGTNQLFYPQTWIFTLVVLTCVVTQLNYLN 245
Query: 244 KALDTFNTAVVSPIYYTMFTSLTILASVIMFKDWDRQDPTQIVTEMCGFVTILSGTFLLH 303
KALDTFNTA+VSPIYY MFTSLTILASVIMFKDWDRQ+ TQIVTE+CGFVTILSGTFLLH
Sbjct: 246 KALDTFNTAIVSPIYYVMFTSLTILASVIMFKDWDRQNGTQIVTEICGFVTILSGTFLLH 305
Query: 304 KTKDMVDGLPPNLPIRLPKHAEEDGYAAEGIPLRSAADGIPLRSP 348
+TKDMV+G LP+R+ KH E+ EGIPLR LRSP
Sbjct: 306 RTKDMVEGSSVILPLRISKHINEE----EGIPLRRQES---LRSP 343
>AT1G34470.1 | chr1:12604574-12606758 FORWARD LENGTH=369
Length = 368
Score = 448 bits (1153), Expect = e-126, Method: Compositional matrix adjust.
Identities = 233/354 (65%), Positives = 258/354 (72%), Gaps = 7/354 (1%)
Query: 7 GRW---VEGMSADNVKGLLLALSSSLFIGASFIVXXXXXXXXXXXXXXXXXXXXXXLLEP 63
G W +GMS+DN+KGL+LALSSSLFIGASFIV LLEP
Sbjct: 6 GSWRDAYKGMSSDNIKGLVLALSSSLFIGASFIVKKKGLKRAGASGLRAGSGGYSYLLEP 65
Query: 64 LWWAGMTAMIVGEIXXXXXXXXXXXILVTPLGALSIIISAVLAHIILREKLHIFGILGCI 123
LWW GM MIVGEI ILVTPLGALSIIISA LAH+IL EKLH FG+LGC+
Sbjct: 66 LWWVGMITMIVGEIANFAAYAFAPAILVTPLGALSIIISAALAHVILHEKLHTFGLLGCV 125
Query: 124 LCVVGSTSIVLHAPPERQIESVAEVWDLATEPXXXXXXXXXXXXXXXXXXHFVPQYGQTH 183
LCVVGS +IVLHAP E++I+SV +VW+LATEP FVPQYGQ+H
Sbjct: 126 LCVVGSITIVLHAPQEQEIDSVLQVWNLATEPAFLLYAAAVVGAAIILIVQFVPQYGQSH 185
Query: 184 IMVYIGVCSLVGSLSVMSVKALGIALKLTFSGMNQLVYPQMWVFLLFVVACIVTQMNYLN 243
+MVYIGVCSLVGSLSVMSVKALGIALKLTFSGMNQL+YPQ WVF L V+ C++TQMNYLN
Sbjct: 186 VMVYIGVCSLVGSLSVMSVKALGIALKLTFSGMNQLIYPQTWVFTLIVLTCVITQMNYLN 245
Query: 244 KALDTFNTAVVSPIYYTMFTSLTILASVIMFKDWDRQDPTQIVTEMCGFVTILSGTFLLH 303
KALDTFNTAVVSPIYY MFTSLTILASVIMFKDWDRQD TQIVTE+CGFVTILSGTFLLH
Sbjct: 246 KALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQDGTQIVTELCGFVTILSGTFLLH 305
Query: 304 KTKDMVDGLPP--NLPIRLPKHAEE-DGYAAEGIPLRSAADGIPLRSPRATESF 354
KTKDMVDG NL +RLPK E+ +G+ EGIPL +SPR F
Sbjct: 306 KTKDMVDGSSSLGNLALRLPKQLEDSNGFEQEGIPLTLRRHECT-KSPRPMRQF 358
>AT4G09640.1 | chr4:6088433-6090604 REVERSE LENGTH=387
Length = 386
Score = 419 bits (1078), Expect = e-117, Method: Compositional matrix adjust.
Identities = 224/364 (61%), Positives = 252/364 (69%), Gaps = 18/364 (4%)
Query: 7 GRW---VEGMSADNVKGLLLALSSSLFIGASFIVXXXXXXXXXXXXXXXXXXXXXXLLEP 63
G W +GMS+DNVKGL+LALSSS+FIGASFIV LLEP
Sbjct: 6 GSWRDAYKGMSSDNVKGLVLALSSSIFIGASFIVKKKGLKKAGASGLRAGSGGYSYLLEP 65
Query: 64 LWWAGMTAMIVGEIXXXXXXXXXXXILVTPLGALSIIISAVLAHIILREKLHIFGILGCI 123
LWW GM MIVGEI ILVTPLGALSIIISA LAHIIL+EKLH FGILGC
Sbjct: 66 LWWIGMITMIVGEIANFAAYAFAPAILVTPLGALSIIISASLAHIILQEKLHTFGILGCA 125
Query: 124 LCVVGSTSIVLHAPPERQIESVAEVWDLATEPXXXXXXXXXXXXXXXXXXHFVPQYGQTH 183
LC+VGS +IVLHAP E+ I SV EVW+LATEP F+P YGQ+H
Sbjct: 126 LCIVGSVTIVLHAPQEQDIVSVLEVWNLATEPAFLFYAAAVVGAAIVLIVQFIPLYGQSH 185
Query: 184 IMVYIGVCSLVGSLSVMSVKALGIALKLTFSGMNQLVYPQMWVFLLFVVACIVTQMNYLN 243
+MVYIGVCSL+GSLSVMSVKALGIALKLTFSG NQL YPQ WVF + V+ C++TQMNYLN
Sbjct: 186 VMVYIGVCSLIGSLSVMSVKALGIALKLTFSGTNQLGYPQTWVFTVIVLFCVITQMNYLN 245
Query: 244 KALDTFNTAVVSPIYYTMFTSLTILASVIMFKDWDRQDPTQIVTEMCGFVTILSGTFLLH 303
KALDTFNTAVVSPIYY MFTSLTILASVIMFKDWDRQ TQI+TE+CGFVTILSGTFLLH
Sbjct: 246 KALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQSGTQIMTELCGFVTILSGTFLLH 305
Query: 304 KTKDMVDGLPP---------NLPIRLPKHAEE-DGYAAEGIPL-----RSAADGIPLRSP 348
T DMVDG +L +R+PKH+E+ +G+ +GI L SA P R
Sbjct: 306 TTTDMVDGESKGNLSSEEDSHLLLRIPKHSEDSNGFVQDGIILSLRRQESAKSPRPARQN 365
Query: 349 RATE 352
+ E
Sbjct: 366 KQLE 369
>AT4G13800.1 | chr4:8002129-8003858 REVERSE LENGTH=337
Length = 336
Score = 336 bits (862), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 178/299 (59%), Positives = 213/299 (71%)
Query: 10 VEGMSADNVKGLLLALSSSLFIGASFIVXXXXXXXXXXXXXXXXXXXXXXLLEPLWWAGM 69
+E MS DN+ G++LA+SSS+FIG+SFI+ L EP WWAGM
Sbjct: 1 MEEMSPDNIHGVILAVSSSIFIGSSFIIKKKGLKKAGVSGARAGEGGYGYLYEPWWWAGM 60
Query: 70 TAMIVGEIXXXXXXXXXXXILVTPLGALSIIISAVLAHIILREKLHIFGILGCILCVVGS 129
MIVGEI ILVTPLGALSII SAVLAH IL EKLH+FGILGC+LCVVGS
Sbjct: 61 ITMIVGEIANFAAYAFAPAILVTPLGALSIIFSAVLAHFILEEKLHMFGILGCVLCVVGS 120
Query: 130 TSIVLHAPPERQIESVAEVWDLATEPXXXXXXXXXXXXXXXXXXHFVPQYGQTHIMVYIG 189
T+IVLHAP E+ IESV +VW LATEP ++ P+YG+TH++VY+G
Sbjct: 121 TTIVLHAPHEQGIESVKQVWHLATEPGFLAYSAVVLVVVLALIFYYEPRYGKTHMIVYVG 180
Query: 190 VCSLVGSLSVMSVKALGIALKLTFSGMNQLVYPQMWVFLLFVVACIVTQMNYLNKALDTF 249
+CSL+GSL+VMSVKA+ IA+KLTFSGMNQ Y W+F++ V C + Q+NYLNKALD F
Sbjct: 181 ICSLMGSLTVMSVKAVAIAIKLTFSGMNQFKYFHAWIFIIVVTICCILQINYLNKALDNF 240
Query: 250 NTAVVSPIYYTMFTSLTILASVIMFKDWDRQDPTQIVTEMCGFVTILSGTFLLHKTKDM 308
NTAV+SP+YY MFT+ TILAS+IMFKDW Q QI TE+CGFVTILSGTFLLHKTKDM
Sbjct: 241 NTAVISPVYYVMFTTFTILASMIMFKDWASQSGLQIATELCGFVTILSGTFLLHKTKDM 299
>AT3G23870.1 | chr3:8620253-8621755 FORWARD LENGTH=336
Length = 335
Score = 334 bits (857), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 176/312 (56%), Positives = 218/312 (69%)
Query: 10 VEGMSADNVKGLLLALSSSLFIGASFIVXXXXXXXXXXXXXXXXXXXXXXLLEPLWWAGM 69
++ MS DN+ G++LA+SSS+FIG+SFI+ L EP WWAGM
Sbjct: 1 MDQMSPDNINGVILAVSSSIFIGSSFIIKKKGLKKAGASGVRAGEGGYGYLKEPWWWAGM 60
Query: 70 TAMIVGEIXXXXXXXXXXXILVTPLGALSIIISAVLAHIILREKLHIFGILGCILCVVGS 129
MIVGE+ ILVTPLGALSII SAVLAH IL+EKLH+FGILGCILCVVGS
Sbjct: 61 ITMIVGEVANFAAYAFAPAILVTPLGALSIIFSAVLAHFILKEKLHMFGILGCILCVVGS 120
Query: 130 TSIVLHAPPERQIESVAEVWDLATEPXXXXXXXXXXXXXXXXXXHFVPQYGQTHIMVYIG 189
T+IVLHAP E++IESV ++W LA EP ++ P+YG+TH++VY+G
Sbjct: 121 TTIVLHAPHEQKIESVKQIWQLAIEPGFLVYSAVIVIVVAILIFYYEPRYGKTHMIVYVG 180
Query: 190 VCSLVGSLSVMSVKALGIALKLTFSGMNQLVYPQMWVFLLFVVACIVTQMNYLNKALDTF 249
+CSL+GSL+VMSVKA+ IA+KLTFSG NQ Y W+F+L V C + Q+NYLNKALDTF
Sbjct: 181 ICSLMGSLTVMSVKAVAIAIKLTFSGTNQFKYFNTWIFILVVATCCILQINYLNKALDTF 240
Query: 250 NTAVVSPIYYTMFTSLTILASVIMFKDWDRQDPTQIVTEMCGFVTILSGTFLLHKTKDMV 309
NTAV+SP+YY MFT+ TI+AS+IMFKDW Q +I TE+CGFVTILSGTFLLHKTKDM
Sbjct: 241 NTAVISPVYYVMFTTFTIIASMIMFKDWASQSGLKIATELCGFVTILSGTFLLHKTKDMG 300
Query: 310 DGLPPNLPIRLP 321
+ I +P
Sbjct: 301 NSASGRGSISMP 312
>AT2G21120.1 | chr2:9052103-9054266 REVERSE LENGTH=329
Length = 328
Score = 327 bits (839), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 157/295 (53%), Positives = 204/295 (69%)
Query: 13 MSADNVKGLLLALSSSLFIGASFIVXXXXXXXXXXXXXXXXXXXXXXLLEPLWWAGMTAM 72
M DN KGL+LA++SS+FIG+SFI+ LLEPLWWAGM M
Sbjct: 1 METDNGKGLILAVASSVFIGSSFILKKKGLKRAGAIGTRAGYGGYTYLLEPLWWAGMVTM 60
Query: 73 IVGEIXXXXXXXXXXXILVTPLGALSIIISAVLAHIILREKLHIFGILGCILCVVGSTSI 132
IVGE +LVTPLGALSIIISAVLAH +L+EKL G+LGC+ C+VGS I
Sbjct: 61 IVGEAANFVAYIYAPAVLVTPLGALSIIISAVLAHFLLKEKLKKMGVLGCVSCIVGSVVI 120
Query: 133 VLHAPPERQIESVAEVWDLATEPXXXXXXXXXXXXXXXXXXHFVPQYGQTHIMVYIGVCS 192
V+HAP E+ SV E+W+LAT+P HF P GQT+I+VYIG+CS
Sbjct: 121 VIHAPKEQTPNSVEEIWNLATQPAFLIYVAITMSIVLALILHFEPLCGQTNILVYIGICS 180
Query: 193 LVGSLSVMSVKALGIALKLTFSGMNQLVYPQMWVFLLFVVACIVTQMNYLNKALDTFNTA 252
L+G+L+VMS+KA+GIA+KLT G++Q+ YPQ W+F++ V C+VTQ+ YLNKALDTFN A
Sbjct: 181 LMGALTVMSIKAIGIAIKLTMEGVSQIGYPQTWLFVMVAVTCVVTQLIYLNKALDTFNAA 240
Query: 253 VVSPIYYTMFTSLTILASVIMFKDWDRQDPTQIVTEMCGFVTILSGTFLLHKTKD 307
+VSP+YY MFT+LTI+AS IMFKDW QD + +E+CGF+T+L+GT +LH T++
Sbjct: 241 IVSPVYYVMFTTLTIVASAIMFKDWSGQDAASVASELCGFITVLTGTMILHGTRE 295
>AT4G38730.1 | chr4:18080484-18082305 REVERSE LENGTH=327
Length = 326
Score = 308 bits (789), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 153/304 (50%), Positives = 197/304 (64%)
Query: 13 MSADNVKGLLLALSSSLFIGASFIVXXXXXXXXXXXXXXXXXXXXXXLLEPLWWAGMTAM 72
M +DN GL+LA+SSS+FIG+SFI+ LLEPLWW G+ M
Sbjct: 1 MVSDNEMGLVLAVSSSVFIGSSFILKKKGLKRAAANGTRAGFGGYTYLLEPLWWVGLVTM 60
Query: 73 IVGEIXXXXXXXXXXXILVTPLGALSIIISAVLAHIILREKLHIFGILGCILCVVGSTSI 132
GEI +LVTPLGALSIIISAVLAH +L EKL G+ GC+ C+VGS I
Sbjct: 61 TFGEIANFVAYVYAPAVLVTPLGALSIIISAVLAHFLLDEKLRKMGVWGCVCCIVGSVMI 120
Query: 133 VLHAPPERQIESVAEVWDLATEPXXXXXXXXXXXXXXXXXXHFVPQYGQTHIMVYIGVCS 192
V+HAP E+ SV E+W LA +P + P GQT+I+VYIG+CS
Sbjct: 121 VIHAPQEQTPNSVEEIWKLAMQPAFLIYVAISMSIVLALILYCEPLCGQTNILVYIGICS 180
Query: 193 LVGSLSVMSVKALGIALKLTFSGMNQLVYPQMWVFLLFVVACIVTQMNYLNKALDTFNTA 252
L+GSL+VMS+KA+GIA+KLTF G+NQ+ YP+ W F + C+V QM YLNKALDTFN A
Sbjct: 181 LMGSLTVMSIKAVGIAIKLTFEGINQIWYPETWFFAMVAAICVVMQMIYLNKALDTFNAA 240
Query: 253 VVSPIYYTMFTSLTILASVIMFKDWDRQDPTQIVTEMCGFVTILSGTFLLHKTKDMVDGL 312
+VSPIYY MFT+LTI+AS IMFKDW+ Q+ I +E+CGF+T+L+GT +LH T++
Sbjct: 241 IVSPIYYVMFTTLTIVASAIMFKDWNGQNTDSIASEICGFITVLTGTVILHSTREEEQAS 300
Query: 313 PPNL 316
P +
Sbjct: 301 PRRM 304
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.325 0.140 0.424
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,199,323
Number of extensions: 209686
Number of successful extensions: 647
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 633
Number of HSP's successfully gapped: 7
Length of query: 358
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 258
Effective length of database: 8,364,969
Effective search space: 2158162002
Effective search space used: 2158162002
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 112 (47.8 bits)