BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os05g0423200 Os05g0423200|AK110840
         (391 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G07730.1  | chr3:2468185-2469606 FORWARD LENGTH=474             70   3e-12
AT1G77270.1  | chr1:29028342-29031068 FORWARD LENGTH=683           69   3e-12
AT4G01170.1  | chr4:499497-500831 FORWARD LENGTH=445               69   6e-12
AT1G21560.2  | chr1:7555208-7556789 FORWARD LENGTH=400             68   9e-12

>AT3G07730.1 | chr3:2468185-2469606 FORWARD LENGTH=474
          Length = 473

 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 41/105 (39%), Positives = 58/105 (55%), Gaps = 11/105 (10%)

Query: 264 STFDEKLNDVLSKPYDLNEYKELLRKATDRKLVSRQRHLRNAS-KPYATRAVGLSFLDHY 322
           S F ++L DVL  PYD  E K+L R  +  K ++R R LR      Y T  +G S+L+ +
Sbjct: 365 SWFRKELMDVLKNPYDEGEMKQLHRYVSIHKKMTRCRELRKGRGSDYETDELGQSYLESF 424

Query: 323 PD------LAIQIDSADSDERKLCLLRKFFFWLENLCHEGAYMPW 361
           PD      L + +D A    R L LLR FFF+L+ + H+G + PW
Sbjct: 425 PDFEKEYKLVVGVDKA----RALKLLRGFFFYLKYVSHDGVFKPW 465



>AT1G77270.1 | chr1:29028342-29031068 FORWARD LENGTH=683
          Length = 682

 Score = 69.3 bits (168), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 72/145 (49%), Gaps = 12/145 (8%)

Query: 227 DLVCIDEHGLPPCTELSDLNVCGDEQGEPLALSCGIP------STFDEKLNDVLSKPYDL 280
           D++ +  H  P   + S      D  G+ + L  GI       S+F +KL ++L  PYD 
Sbjct: 531 DIIAVSNHPFPDGGK-SPFEATKD--GKVIDLEDGIKPDDIFNSSFSKKLMEILRNPYDE 587

Query: 281 NEYKELLRKATDRKLVSRQRHLRNASKP--YATRAVGLSFLDHYPDLAIQIDSADSD-ER 337
            E+  L  +A+ ++ +++ R LR+  +   Y      LS+L+ Y D          D  R
Sbjct: 588 KEFLRLYNEASVKRPLTKSRQLRDGREIEYYCDDQFALSYLEKYTDFNKTYHRYRKDLPR 647

Query: 338 KLCLLRKFFFWLENLCHEGAYMPWI 362
            L LLR FFF+LEN+  EGA+ PW+
Sbjct: 648 ALNLLRGFFFYLENIVLEGAFKPWL 672



>AT4G01170.1 | chr4:499497-500831 FORWARD LENGTH=445
          Length = 444

 Score = 68.6 bits (166), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 37/102 (36%), Positives = 57/102 (55%), Gaps = 4/102 (3%)

Query: 264 STFDEKLNDVLSKPYDLNEYKELLRKATDRKLVSRQRHLRNAS-KPYATRAVGLSFLDHY 322
           + F ++L DVL +PYD  E K+L R  +  + ++R R LR      Y T  +G S+L+ +
Sbjct: 335 TWFRKELMDVLKQPYDEEEMKQLHRDVSIHRKMTRCRELRKGRGSVYETGELGQSYLESF 394

Query: 323 PDLAIQ---IDSADSDERKLCLLRKFFFWLENLCHEGAYMPW 361
           PD   +   +   D   R L LLR FFF+L+ + H+G + PW
Sbjct: 395 PDFEKEYKLVVGVDDKARALKLLRGFFFYLKYVSHDGVFKPW 436



>AT1G21560.2 | chr1:7555208-7556789 FORWARD LENGTH=400
          Length = 399

 Score = 67.8 bits (164), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 50/157 (31%), Positives = 78/157 (49%), Gaps = 22/157 (14%)

Query: 230 CIDEHGLPPCTELSDLNVCGD-----EQGEPLALSCGIP-------------STFDEKLN 271
           C ++H +      SD+ V GD     E+  P   S                 S F  ++ 
Sbjct: 235 CEEDHTVSLSDSDSDIIVVGDCPFLEEEDSPFVPSKSYKVIDLDEESSDQRNSWFRREIM 294

Query: 272 DVLSKPYDLNEYKELLRKATDRKLVSRQRHLRNASK-PYATRAVGLSFLDHYPDLAIQ-I 329
           +VL +PY + E KEL ++A+   + SR   LR+ ++  + T     S+LD YPD   Q +
Sbjct: 295 NVLKQPYTVTELKELHKEASVHGVSSRHIELRDGTEFSFPTNKKKPSYLDRYPDFKKQYL 354

Query: 330 DS-ADSDERK-LCLLRKFFFWLENLCHEGAYMPWIDK 364
           DS  + DERK L LLR F F++ N+  + A+ PW+D+
Sbjct: 355 DSLREKDERKALNLLRGFIFYITNVVRDDAFKPWLDQ 391



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.315    0.134    0.396 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,363,038
Number of extensions: 430326
Number of successful extensions: 751
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 745
Number of HSP's successfully gapped: 4
Length of query: 391
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 290
Effective length of database: 8,337,553
Effective search space: 2417890370
Effective search space used: 2417890370
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 113 (48.1 bits)