BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os05g0422600 Os05g0422600|Os05g0422600
         (694 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G21610.3  | chr1:7574104-7578643 FORWARD LENGTH=686            264   2e-70
AT1G77310.1  | chr1:29051671-29056179 FORWARD LENGTH=718          152   8e-37

>AT1G21610.3 | chr1:7574104-7578643 FORWARD LENGTH=686
          Length = 685

 Score =  264 bits (674), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 184/514 (35%), Positives = 273/514 (53%), Gaps = 73/514 (14%)

Query: 58  VFSVELRPGETTIVSWRKMLKEXXXXXXXXXXXXXXXXXXXXXXXXXXSGATHPTE---N 114
           +  VELRPG+TT VSW+K++++                          +   HP E   N
Sbjct: 31  LLKVELRPGDTTYVSWKKLMRDAGKVNGLSASVPDPPPNANPNLEFRIAPG-HPVEIETN 89

Query: 115 DCAQSNRFNSVIEKIERLYMGKNSSXXXXXXXXXXXXXXXXXXSFIDDDELDEYFEVDNF 174
           +   SNRFN+VIEKIERLY G +SS                  SFIDD ELDEYFEVDN 
Sbjct: 90  EQPHSNRFNAVIEKIERLYKGNDSSDGEELDGAPDDDEYDTEDSFIDDAELDEYFEVDNS 149

Query: 175 ATKHNGYFVNKGKLEQIDFDSVQTVEPXXXXXXXXXXXYIE-----------------NN 217
             KH+G++VN+GKLE+++  +    +P             +                  +
Sbjct: 150 TVKHDGFYVNRGKLERMEPSTTSNQQPKKRRRKDSAKPCRDAVDVSDKHTKLSITARKKD 209

Query: 218 KEFSPGSSSYMGTPL----------------RDSKRSTLQTGKSTSNGHKSGANGTFEYP 261
           +  +PGS     +PL                + S R+  Q+   TS  HKS   G+    
Sbjct: 210 QSTAPGSWKTQESPLPSGAQDANTSVPLDDVKHSDRANHQSRNDTS--HKSRETGSSSAL 267

Query: 262 YSAYRDKDAPGHLGLQQKITS---NGANQDLSKNMHHKEKYNAGQFSGLHASSNIYSTET 318
           +  Y +K       L Q+ TS          ++    ++K N    +G+H  +N+  +  
Sbjct: 268 HQKYSNK------SLHQQSTSLLGKSPPNVFAEVTVVRQKEN----NGMHQLANVTGSRQ 317

Query: 319 MHLATKIHTEGSGTKTKGTRLERAIRDLQNIVTEYKP-QILDVHEAEANCQVAVKRRLPQ 377
              A+K   +GS  K+K + LE+AIR+L+ +V E +P  I +  EA+ + Q AVKRRLP+
Sbjct: 318 SSQASK--KDGSNVKSKTSILEKAIRELEKVVVESRPPAITENQEADTSSQ-AVKRRLPR 374

Query: 378 EVKQKLAKVARLS-ANQGKIPEHELINRLMGIVGHLVHRRTLKRNMKEMVQSGLCAKQEK 436
           +VK KLAKVAR++ A+QGK    ELINRLM IVGHL+  R+LKRN+K M+  G  A +EK
Sbjct: 375 DVKLKLAKVARIAQASQGK-HSTELINRLMSIVGHLIQLRSLKRNLKIMIDMGDSATREK 433

Query: 437 AGKLQQVKMEIYEMVKARL------ATKPKGAEHKVESIDGFQDPVTHDDRMALRGKSVM 490
             + +Q+  E+ +M+KA++      A KP+GA     + D FQD V   ++ +L+ K VM
Sbjct: 434 DTRFKQINNEVLDMIKAKVSLMESQAIKPEGA-----TSDDFQDSV---EKPSLK-KFVM 484

Query: 491 DAVLEDRICDLYDLYVEGMDEDKGPQSRKLYLEV 524
           DA LED++CDLYD++++G+DED+GPQ++KLY+ +
Sbjct: 485 DAALEDKLCDLYDIFIDGLDEDQGPQTKKLYVNL 518



>AT1G77310.1 | chr1:29051671-29056179 FORWARD LENGTH=718
          Length = 717

 Score =  152 bits (383), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 95/202 (47%), Positives = 131/202 (64%), Gaps = 19/202 (9%)

Query: 329 GSGTKTKGTRLERAIRDLQNIVTEYKP-QILDVHEAEANCQVAVKRRLPQEVKQKLAKVA 387
           GS  + K + LE+AIR+L+ +V E +P    +  +A+ + Q AVKR LP +VK  LAKVA
Sbjct: 339 GSNGRPKYSTLEKAIRNLEKLVAESRPPAATENQDADISSQ-AVKRGLPGDVKLHLAKVA 397

Query: 388 RLS-ANQGKIPEHELINRLMGIVGHLVHRRTLKRNMKEMVQSGLCAKQEKAGKLQQVKME 446
           R++ A+QG+I   ELINRLMGIVGHL+  R+LKRN+K M+ S + A +EK  + Q++K E
Sbjct: 398 RIAYASQGEI-SGELINRLMGIVGHLIQIRSLKRNLKIMIDSIVTANREKDTRFQRIKSE 456

Query: 447 IYEMVKARLATKPKGAEHKVESIDGFQDPVTHDD--RMALRGKS-----VMDAVLEDRIC 499
           I EM+K ++          VES +  Q+  T DD   +   GKS     VMD  LE+++C
Sbjct: 457 ITEMLKTQVPL--------VESQETNQEAGTSDDFQDVGSLGKSPVKKFVMDVALEEKLC 508

Query: 500 DLYDLYVEGMDEDKGPQSRKLY 521
           DLYD++VEGMDE  G Q RKLY
Sbjct: 509 DLYDVFVEGMDEHSGSQIRKLY 530




 Score = 99.0 bits (245), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 56/138 (40%), Positives = 68/138 (49%), Gaps = 3/138 (2%)

Query: 58  VFSVELRPGETTIVSWRKMLKEXXXXXXXXXXXXXXXXXXXXXXXXXXSGATHPTENDCA 117
           +  VEL   ETT+VSW+K++ E                                TEN+  
Sbjct: 33  LLKVELLKEETTLVSWKKLMDEASKENGGLFVSAPERLLNANPNLEFRLAPGAQTENEMV 92

Query: 118 ---QSNRFNSVIEKIERLYMGKNSSXXXXXXXXXXXXXXXXXXSFIDDDELDEYFEVDNF 174
                NR NSVI KIERLYMGK+ S                  SFIDD ELDEYFEVDN 
Sbjct: 93  NQPHPNRLNSVIAKIERLYMGKDGSDGEELDGAPDDDDYDTEDSFIDDAELDEYFEVDNS 152

Query: 175 ATKHNGYFVNKGKLEQID 192
             KH+G+FVN+GKLE+I+
Sbjct: 153 PIKHDGFFVNRGKLERIE 170



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.311    0.128    0.365 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 12,564,880
Number of extensions: 494916
Number of successful extensions: 1137
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 1130
Number of HSP's successfully gapped: 4
Length of query: 694
Length of database: 11,106,569
Length adjustment: 105
Effective length of query: 589
Effective length of database: 8,227,889
Effective search space: 4846226621
Effective search space used: 4846226621
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 115 (48.9 bits)