BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0419100 Os05g0419100|AK121400
(258 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G20510.1 | chr5:6939991-6942846 REVERSE LENGTH=261 306 8e-84
AT3G42790.1 | chr3:14878128-14879618 REVERSE LENGTH=251 306 8e-84
AT2G02470.1 | chr2:652837-654621 FORWARD LENGTH=257 303 7e-83
AT1G14510.1 | chr1:4962171-4964154 REVERSE LENGTH=253 290 4e-79
AT5G26210.1 | chr5:9158566-9160221 REVERSE LENGTH=256 272 2e-73
AT5G05610.1 | chr5:1677331-1678942 REVERSE LENGTH=242 254 3e-68
AT3G11200.1 | chr3:3508387-3510418 REVERSE LENGTH=247 236 1e-62
AT3G61740.1 | chr3:22851133-22856548 REVERSE LENGTH=1019 47 8e-06
>AT5G20510.1 | chr5:6939991-6942846 REVERSE LENGTH=261
Length = 260
Score = 306 bits (784), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 150/261 (57%), Positives = 183/261 (70%), Gaps = 6/261 (2%)
Query: 1 MDGGSGGPYTSRTAEEVFRDFRGRRAGMIKALTTDVEKFYQLCDPEKENLCLYGYPNETW 60
M+GG+ Y+ RT EEVFRDF+GRRAG+I+ALTTDVE F+Q CDPEK+NLCLYG+PNE W
Sbjct: 1 MEGGTA-HYSPRTVEEVFRDFKGRRAGIIQALTTDVEDFFQQCDPEKQNLCLYGFPNEVW 59
Query: 61 EVTLXXXXXXXXXXXXXLGINFARDGMNEKDWLALVAVHSDSWLLAVAFYFAARFGFDKE 120
EV L LGINFARDGM E++WL+LVAVHSD+WLL+V+FYF +RFGFD+
Sbjct: 60 EVNLPAEEVPPELPEPALGINFARDGMQERNWLSLVAVHSDAWLLSVSFYFGSRFGFDRA 119
Query: 121 ARRRLFNMINNLPTIFEVVTGAAKKQTKEKAPNSTNKP---NKPSSKMQP-RPESHSXXX 176
R+RLF+MIN +PT++EVVTG A+KQTKE P+S N+ +K +SKM+ +S
Sbjct: 120 DRKRLFSMINEVPTVYEVVTGNAEKQTKE-MPSSANQNGNRSKSNSKMRGLESKSSKTIH 178
Query: 177 XXXXXXXXXXXXXXXXXXXXXXXXXNTLCGSCGTNDGKDEFWICCDSCERWYHGKCVKIT 236
TLCG+CG N DEFWICCD CE+W+HG+CVKIT
Sbjct: 179 AKDEEEGLELEEGEEEEDEDEDEHGETLCGACGDNYASDEFWICCDMCEKWFHGECVKIT 238
Query: 237 PARAEHIKHYKCPDCGNKRAR 257
PARAEHIKHYKCP C NKRAR
Sbjct: 239 PARAEHIKHYKCPTCSNKRAR 259
>AT3G42790.1 | chr3:14878128-14879618 REVERSE LENGTH=251
Length = 250
Score = 306 bits (783), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 147/258 (56%), Positives = 176/258 (68%), Gaps = 8/258 (3%)
Query: 1 MDGGSGGPYTSRTAEEVFRDFRGRRAGMIKALTTDVEKFYQLCDPEKENLCLYGYPNETW 60
M+GG+ Y RT EEVF+DF+GRR ++KALTTDV++FYQ CDPEKENLCLYG PNE W
Sbjct: 1 MEGGAA-LYNPRTVEEVFKDFKGRRTAIVKALTTDVQEFYQQCDPEKENLCLYGLPNEEW 59
Query: 61 EVTLXXXXXXXXXXXXXLGINFARDGMNEKDWLALVAVHSDSWLLAVAFYFAARFGFDKE 120
EV L LGINFARDG++EK+WL+LVA+HSD+WLL+V+FYF +RF F KE
Sbjct: 60 EVNLPAEEVPPELPEPALGINFARDGLSEKEWLSLVAIHSDAWLLSVSFYFGSRFSFHKE 119
Query: 121 ARRRLFNMINNLPTIFEVVTGAAKKQTKEKAPNSTNKPNKPSSKMQPRPESHSXXXXXXX 180
R+RLFNMIN++PTIFEVVTG AK + K A N +K +SK++ S
Sbjct: 120 ERKRLFNMINDVPTIFEVVTGMAKAKDKSSAANQNGNKSKSNSKVRTSEGKSS------- 172
Query: 181 XXXXXXXXXXXXXXXXXXXXXNTLCGSCGTNDGKDEFWICCDSCERWYHGKCVKITPARA 240
TLCG+CG +DG DEFWICCD CE+W+HGKCVKITPARA
Sbjct: 173 KTKQPKEEDEEIDEDDEDDHGETLCGACGDSDGADEFWICCDLCEKWFHGKCVKITPARA 232
Query: 241 EHIKHYKCPDCGNKRARA 258
EHIK YKCP C NKRARA
Sbjct: 233 EHIKQYKCPSCSNKRARA 250
>AT2G02470.1 | chr2:652837-654621 FORWARD LENGTH=257
Length = 256
Score = 303 bits (775), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 151/247 (61%), Positives = 170/247 (68%), Gaps = 2/247 (0%)
Query: 12 RTAEEVFRDFRGRRAGMIKALTTDVEKFYQLCDPEKENLCLYGYPNETWEVTLXXXXXXX 71
RT EEVF DFRGRRAG+IKALT D+ KFYQ CDPEKENLCLYG PNETWEV L
Sbjct: 10 RTVEEVFSDFRGRRAGLIKALTNDMVKFYQTCDPEKENLCLYGLPNETWEVNLPVEEVPP 69
Query: 72 XXXXXXLGINFARDGMNEKDWLALVAVHSDSWLLAVAFYFAARFGFDKEARRRLFNMINN 131
LGINFARDGM EKDW++LVAVHSDSWLL+VAFYF ARFGF K R+RLF MIN
Sbjct: 70 ELPEPALGINFARDGMQEKDWVSLVAVHSDSWLLSVAFYFGARFGFGKNERKRLFQMINE 129
Query: 132 LPTIFEVVTGAAKKQTKEKAPNSTNKPNKPSSKMQPRPESHSXXXXXXXXX-XXXXXXXX 190
LPTIFEVV+G AK Q+K+ + N+ N +KPS + ES S
Sbjct: 130 LPTIFEVVSGNAK-QSKDLSVNNNNSKSKPSGVKSRQSESLSKVAKMSSPPPKEEEEEED 188
Query: 191 XXXXXXXXXXXNTLCGSCGTNDGKDEFWICCDSCERWYHGKCVKITPARAEHIKHYKCPD 250
+CG+CG N G DEFWICCD+CE+W+HGKCVKITPA+AEHIKHYKCP
Sbjct: 189 ESEDESEDDEQGAVCGACGDNYGTDEFWICCDACEKWFHGKCVKITPAKAEHIKHYKCPT 248
Query: 251 CGNKRAR 257
C NKRAR
Sbjct: 249 CSNKRAR 255
>AT1G14510.1 | chr1:4962171-4964154 REVERSE LENGTH=253
Length = 252
Score = 290 bits (743), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 146/240 (60%), Positives = 166/240 (69%), Gaps = 5/240 (2%)
Query: 12 RTAEEVFRDFRGRRAGMIKALTTDVEKFYQLCDPEKENLCLYGYPNETWEVTLXXXXXXX 71
RT EEVF DFRGRRAG+IKAL+TDV+KFY CDPEKENLCLYG PNETWEV L
Sbjct: 10 RTVEEVFSDFRGRRAGLIKALSTDVQKFYHQCDPEKENLCLYGLPNETWEVNLPVEEVPP 69
Query: 72 XXXXXXLGINFARDGMNEKDWLALVAVHSDSWLLAVAFYFAARFGFDKEARRRLFNMINN 131
LGINFARDGM EKDW++LVAVHSDSWL++VAFYF ARFGF K R+RLF MIN+
Sbjct: 70 ELPEPALGINFARDGMQEKDWISLVAVHSDSWLISVAFYFGARFGFGKNERKRLFQMIND 129
Query: 132 LPTIFEVVTGAAKKQTKEKAPNSTNKPNKPSSKMQPRPESHSXXXXXXXXXXXXXXXXXX 191
LPTIFEVVTG AK Q+K+++ N N SS +PR HS
Sbjct: 130 LPTIFEVVTGNAK-QSKDQSANH-NSSRSKSSGGKPR---HSESHTKASKMSPPPRKEDE 184
Query: 192 XXXXXXXXXXNTLCGSCGTNDGKDEFWICCDSCERWYHGKCVKITPARAEHIKHYKCPDC 251
+CG+CG N G DEFWICCD+CE+W+HGKCVKITPA+AEHIKHYKCP C
Sbjct: 185 SGDEDEDDEQGAVCGACGDNYGGDEFWICCDACEKWFHGKCVKITPAKAEHIKHYKCPSC 244
>AT5G26210.1 | chr5:9158566-9160221 REVERSE LENGTH=256
Length = 255
Score = 272 bits (695), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 154/254 (60%), Positives = 176/254 (69%), Gaps = 1/254 (0%)
Query: 5 SGGPYTSRTAEEVFRDFRGRRAGMIKALTTDVEKFYQLCDPEKENLCLYGYPNETWEVTL 64
+GG Y RT EEVFRDF+GRRAGMIKALTTDV++F++LCDPEKENLCLYG+PNE WEV L
Sbjct: 3 AGGAYNPRTVEEVFRDFKGRRAGMIKALTTDVQEFFRLCDPEKENLCLYGHPNEHWEVNL 62
Query: 65 XXXXXXXXXXXXXLGINFARDGMNEKDWLALVAVHSDSWLLAVAFYFAARFGFDKEARRR 124
LGINFARDGM EKDWL+LVAVHSD+WLLAVAF+F ARFGFDK R+R
Sbjct: 63 PAEEVPPELPEPVLGINFARDGMAEKDWLSLVAVHSDAWLLAVAFFFGARFGFDKADRKR 122
Query: 125 LFNMINNLPTIFEVVTGAAKKQTKEKAPNSTNKPNKPSSKMQPRPESHSXXXXXXXXXXX 184
LFNM+N+LPTIFEVV G AKKQ K+K+ S N N+ S + ES +
Sbjct: 123 LFNMVNDLPTIFEVVAGTAKKQGKDKSSVSNNSSNRSKSSSKRGSESRAKFSKPEPKDDE 182
Query: 185 XXXXXXXXXXXXXXXXXNTLCGSCGTNDGKDEFWICCDSCERWYHGKCVKITPARAEHIK 244
T CG+CG + DEFWICCD CE W+HGKCVKITPARAEHIK
Sbjct: 183 EEEEEGVEEEDEDEQG-ETQCGACGESYAADEFWICCDLCEMWFHGKCVKITPARAEHIK 241
Query: 245 HYKCPDCGNKRARA 258
YKCP C NKRAR+
Sbjct: 242 QYKCPSCSNKRARS 255
>AT5G05610.1 | chr5:1677331-1678942 REVERSE LENGTH=242
Length = 241
Score = 254 bits (649), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 129/246 (52%), Positives = 158/246 (64%), Gaps = 14/246 (5%)
Query: 12 RTAEEVFRDFRGRRAGMIKALTTDVEKFYQLCDPEKENLCLYGYPNETWEVTLXXXXXXX 71
RT EE+F+DF GRR+G ++AL+ DV+KFY LCDPE ENLCLYG+PN TWEV L
Sbjct: 9 RTVEEIFKDFSGRRSGFLRALSVDVDKFYSLCDPEMENLCLYGHPNGTWEVNLPAEEVPP 68
Query: 72 XXXXXXLGINFARDGMNEKDWLALVAVHSDSWLLAVAFYFAARFGFDKEARRRLFNMINN 131
LGINFARDGM KDWL+LVAVHSD WLL+V+ YF AR ++ R+RLF++IN+
Sbjct: 69 ELPEPALGINFARDGMQRKDWLSLVAVHSDCWLLSVSSYFGAR--LNRNERKRLFSLIND 126
Query: 132 LPTIFEVVTGAAKKQTKEKAPNSTNKPNKPSSKMQPRPESHSXXXXXXXXXXXXXXXXXX 191
LPT+FEVVTG +K K+ P S + +K + ++ E +
Sbjct: 127 LPTLFEVVTG--RKPIKDGKP-SMDLGSKSRNGVKRSIEGQT---------KSTPKLMEE 174
Query: 192 XXXXXXXXXXNTLCGSCGTNDGKDEFWICCDSCERWYHGKCVKITPARAEHIKHYKCPDC 251
+TLCGSCG N DEFWICCD CERWYHGKCVKITPA+AE IK YKCP C
Sbjct: 175 SYEDEDDEHGDTLCGSCGGNYTNDEFWICCDVCERWYHGKCVKITPAKAESIKQYKCPSC 234
Query: 252 GNKRAR 257
K+ R
Sbjct: 235 CTKKGR 240
>AT3G11200.1 | chr3:3508387-3510418 REVERSE LENGTH=247
Length = 246
Score = 236 bits (601), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 125/246 (50%), Positives = 155/246 (63%), Gaps = 11/246 (4%)
Query: 12 RTAEEVFRDFRGRRAGMIKALTTDVEKFYQLCDPEKENLCLYGYPNETWEVTLXXXXXXX 71
RT EE+F+D+ RRA +++ALT DV+ FY CDPEKENLCLYG+PNE+WEV L
Sbjct: 11 RTVEEIFKDYSARRAALLRALTKDVDDFYSQCDPEKENLCLYGHPNESWEVNLPAEEVPP 70
Query: 72 XXXXXXLGINFARDGMNEKDWLALVAVHSDSWLLAVAFYFAARFGFDKEARRRLFNMINN 131
LGINFARDGM KDWL+LVAVHSD WLL+V+FYF AR ++ R+RLF++IN+
Sbjct: 71 ELPEPALGINFARDGMQRKDWLSLVAVHSDCWLLSVSFYFGAR--LNRNERKRLFSLIND 128
Query: 132 LPTIFEVVTGAAKKQTKEKAPNSTNKPNKPSSKMQPRPESHSXXXXXXXXXXXXXXXXXX 191
LPT+F+VVTG +K K+ P+S S + R +
Sbjct: 129 LPTLFDVVTG--RKAMKDNKPSS-------DSGSKSRNGTKRSIDGQTKSSTPKLMEESY 179
Query: 192 XXXXXXXXXXNTLCGSCGTNDGKDEFWICCDSCERWYHGKCVKITPARAEHIKHYKCPDC 251
+TLCGSCG + +EFWICCD CERWYHGKCVKITPA+AE IK YKCP C
Sbjct: 180 EEEEEEDEHGDTLCGSCGGHYTNEEFWICCDVCERWYHGKCVKITPAKAESIKQYKCPPC 239
Query: 252 GNKRAR 257
K+ R
Sbjct: 240 CAKKGR 245
>AT3G61740.1 | chr3:22851133-22856548 REVERSE LENGTH=1019
Length = 1018
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Query: 202 NTLCGSCGT--NDGKDEFWICCDSCERWYHGKCVKITPARAEHIKH--YKCPDC 251
N CG C + D W+CCD C+ W H +C IT R + ++H Y CPDC
Sbjct: 362 NQYCGICKRIWHPSDDGDWVCCDGCDVWVHAECDNITNERFKELEHNNYYCPDC 415
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.135 0.439
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,545,532
Number of extensions: 199932
Number of successful extensions: 748
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 754
Number of HSP's successfully gapped: 11
Length of query: 258
Length of database: 11,106,569
Length adjustment: 96
Effective length of query: 162
Effective length of database: 8,474,633
Effective search space: 1372890546
Effective search space used: 1372890546
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 110 (47.0 bits)