BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0414400 Os05g0414400|AK119358
(370 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G17450.1 | chr3:5972793-5975684 REVERSE LENGTH=878 106 2e-23
AT1G43260.1 | chr1:16318253-16319234 FORWARD LENGTH=295 90 2e-18
AT1G79740.1 | chr1:30004367-30006715 REVERSE LENGTH=652 85 5e-17
AT4G15020.1 | chr4:8575806-8578372 FORWARD LENGTH=769 79 3e-15
AT5G31412.1 | chr5:11541463-11543768 REVERSE LENGTH=434 78 8e-15
AT3G22220.1 | chr3:7839808-7842358 REVERSE LENGTH=762 70 1e-12
AT4G08267.1 | chr4:5216854-5217697 FORWARD LENGTH=127 69 3e-12
AT3G13020.1 | chr3:4166995-4168917 REVERSE LENGTH=606 61 1e-09
AT3G13010.1 | chr3:4162931-4164733 REVERSE LENGTH=573 57 1e-08
AT3G13030.1 | chr3:4169675-4171417 REVERSE LENGTH=545 52 4e-07
>AT3G17450.1 | chr3:5972793-5975684 REVERSE LENGTH=878
Length = 877
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 153/319 (47%), Gaps = 35/319 (10%)
Query: 51 GMFQSNKRKSKAADEDLHMKLRTRLDAEVARMFYSSGLSLKAATDPFFKSAFSRATSMPG 110
G F +KRKS + +M+ + + ARM PF + S+ +
Sbjct: 246 GRFSKDKRKSF---DSTNMRSVSEAKTKRARMI------------PFQSPSSSKQRKLYS 290
Query: 111 FTAEEDEHQDDQPSLVTQMFFSIGLSPTITRNPYYRGSFAMVALFQIPGYVPPGVDQLKT 170
+ + D S +++ +G+ + Y++ ++ ++ G+V P
Sbjct: 291 SCSNRVVSRKDVTSSISKFLHHVGVPTEAANSLYFQKMIELIGMYG-EGFVVPSSQLFSG 349
Query: 171 TLLQKERADIENMLQTIKNTWRKAGVTIVSDGWSDFKRRPIINIIAVNEAGPVFLQAINN 230
LLQ+E + I++ L+ +++W G +I++D W++ + + +I+ + G F +I+
Sbjct: 350 RLLQEEMSTIKSYLREYRSSWVVTGCSIMADTWTNTEGKKMISFLVSCPRGVYFHSSIDA 409
Query: 231 EDGWMWMMDDYIA--EKLIAAIEDVGSENVVQVITDNDPFCRAAGVLIEQKYSHIQWTPS 288
D +++D ++ + L ++D+G ENVVQVIT N R+AG L+E+K ++ WTP
Sbjct: 410 TD----IVEDALSLFKCLDKLVDDIGEENVVQVITQNTAIFRSAGKLLEEKRKNLYWTPC 465
Query: 289 VAHSLSLALENICAAKNAENVVFKDCHWISEVIGDAKMINDFISNHSMVLSMI-SEFSK- 346
H L LE+ F ++SE + A+ I FI N + +L+++ +EF++
Sbjct: 466 AIHCTELVLED-----------FSKLEFVSECLEKAQRITRFIYNQTWLLNLMKNEFTQG 514
Query: 347 LKILGIAHTRFASDIVMLK 365
L +L A R AS L+
Sbjct: 515 LDLLRPAVMRHASGFTTLQ 533
>AT1G43260.1 | chr1:16318253-16319234 FORWARD LENGTH=295
Length = 294
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 98/196 (50%), Gaps = 22/196 (11%)
Query: 158 PGYVPPGVDQLKTTLLQKERADIENMLQTIKNTWRKAGVTIVSDGWSDFKRRPIINIIAV 217
PG PP QL+ LL++E ++ +++ ++ WR G ++ +D WSD KRR I+N+
Sbjct: 70 PGVTPPSQYQLREPLLKEEVVRMKGLMEEQEDEWRVNGCSVTTDSWSDRKRRSIMNLCIN 129
Query: 218 NEAGPVFLQAINNEDGWMWMMDDYIAEKLIA-----AIEDVGSENVVQVITDNDPFCRAA 272
+ G +FL + + D D + E + A I+++G ++VVQV+T+N A
Sbjct: 130 CKEGTMFLSSKDCFD------DSHTGEYIFAYVNEYCIKNLGGDHVVQVVTNNATNNITA 183
Query: 273 GVLIEQKYSHIQWTPSVAHSLSLALENICAAKNAENVVFKDCHWISEVIGDAKMINDFIS 332
L+++ I WT H+++L +E I ++ E++ AK FI
Sbjct: 184 AKLLKEVRPTIFWTFCATHTINLMVEGISKLAMSD-----------EIVKMAKAFTIFIY 232
Query: 333 NHSMVLSMISEFSKLK 348
H LSM+ F+K +
Sbjct: 233 AHHQTLSMMRSFTKRR 248
>AT1G79740.1 | chr1:30004367-30006715 REVERSE LENGTH=652
Length = 651
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 120/257 (46%), Gaps = 20/257 (7%)
Query: 111 FTAEEDEHQDDQPSLVTQMFFSIGLSPTITRNPYYRGSFAMVALFQIPGYVPPGVDQLKT 170
F + QD ++ FF + + R+P Y VA PG+V P KT
Sbjct: 97 FPSSPPNAQDIAERSISLFFFENKIDFAVARSPSYHHMLDAVAKCG-PGFVAPSP---KT 152
Query: 171 TLLQKERADIENMLQTIKNTWRKAGVTIVSDGWSDFKRRPIINIIAVNEAGPVFLQAINN 230
L + ++DI L+ + W G TI+++ W+D K R +IN +V+ +F +
Sbjct: 153 EWLDRVKSDISLQLKDTEKEWVTTGCTIIAEAWTDNKSRALIN-FSVSSPSRIFFHKSVD 211
Query: 231 EDGWMWMMDDYIAEKLIAAIEDVGSENVVQVITDNDPFCRAA-GVLIEQKYSHIQWTPSV 289
+ + +A+ + I+D+G E++VQ+I DN FC + Q Y+ I +P
Sbjct: 212 ASSY-FKNSKCLADLFDSVIQDIGQEHIVQIIMDNS-FCYTGISNHLLQNYATIFVSPCA 269
Query: 290 AHSLSLALENICAAKNAENVVFKDCHWISEVIGDAKMINDFISNHSMVLSMISEFSKLK- 348
+ L++ LE F W+++ I A++I+ F+ N+S VL ++ + + +
Sbjct: 270 SQCLNIILEE-----------FSKVDWVNQCISQAQVISKFVYNNSPVLDLLRKLTGGQD 318
Query: 349 ILGIAHTRFASDIVMLK 365
I+ TR S+ + L+
Sbjct: 319 IIRSGVTRSVSNFLSLQ 335
>AT4G15020.1 | chr4:8575806-8578372 FORWARD LENGTH=769
Length = 768
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 97/210 (46%), Gaps = 14/210 (6%)
Query: 159 GYVPPGVDQLKTTLLQKERADIENMLQTIKNTWRKAGVTIVSDGWSDFKRRPIINIIAVN 218
G P D L+ +L+ ++ + K W++ G +I+ + + K ++N +
Sbjct: 230 GVSAPTHDDLRGWILKNCVEEMAKEIDECKAMWKRTGCSILVEELNSDKGFKVLNFLVYC 289
Query: 219 EAGPVFLQAINNEDGWMWMMDDYIAEKLIAAIEDVGSENVVQVITDNDPFCRAAGVLIEQ 278
VFL++++ + + D + E L +E+VGS NVVQVIT D + AG +
Sbjct: 290 PEKVVFLKSVDASE--VLSSADKLFELLSELVEEVGSTNVVQVITKCDDYYVDAGKRLML 347
Query: 279 KYSHIQWTPSVAHSLSLALENICAAKNAENVVFKDCHWISEVIGDAKMINDFISNHSMVL 338
Y + W P AH + LE F WISE I A+ I F+ NHS VL
Sbjct: 348 VYPSLYWVPCAAHCIDQMLEE-----------FGKLGWISETIEQAQAITRFVYNHSGVL 396
Query: 339 SMISEF-SKLKILGIAHTRFASDIVMLKRF 367
+++ +F S IL A + A++ L R
Sbjct: 397 NLMWKFTSGNDILLPAFSSSATNFATLGRI 426
>AT5G31412.1 | chr5:11541463-11543768 REVERSE LENGTH=434
Length = 433
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 75/131 (57%), Gaps = 14/131 (10%)
Query: 174 QKERADIENMLQTIKNTWRKAGVTIVSDGWSDFKRRPIINIIAVNEAGPVFLQA----IN 229
++ER + +L+T K W++ GV ++D WSD KRR I+N+ ++ G FL + N
Sbjct: 116 EQERPKV--LLKTQKAGWKQNGV--MTDAWSDMKRRSIMNLCVNSKGGKCFLSSKDASTN 171
Query: 230 NEDGWMWMMDDYIAEKLIAAIEDVGSENVVQVITDNDPFCRAAGVLIEQKYSHIQWTPSV 289
+ G YI E + I DVG++NVVQV+TDN A ++++K +I WT V
Sbjct: 172 SHTGL------YIFEYVDRCIADVGAKNVVQVVTDNALNNVTAAKMLKEKRPNIFWTGCV 225
Query: 290 AHSLSLALENI 300
AH++ L LE I
Sbjct: 226 AHTVDLMLEAI 236
>AT3G22220.1 | chr3:7839808-7842358 REVERSE LENGTH=762
Length = 761
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 86/187 (45%), Gaps = 13/187 (6%)
Query: 159 GYVPPGVDQLKTTLLQKERADIENMLQTIKNTWRKAGVTIVSDGWSDFKRRPIINIIAVN 218
G P + L+ +L+ +++ + K W++ G +++ + + I+ +
Sbjct: 226 GVSIPTHEDLRGWILKSCVEEVKKEIDECKTLWKRTGCSVLVQELNSNEGPLILKFLVYC 285
Query: 219 EAGPVFLQAINNEDGWMWMMDDYIAEKLIAAIEDVGSENVVQVITDNDPFCRAAGVLIEQ 278
VFL++++ + + +D + E L +E++G NVVQVIT + AAG +
Sbjct: 286 PEKVVFLKSVDASE--ILDSEDKLYELLKEVVEEIGDTNVVQVITKCEDHYAAAGKKLMD 343
Query: 279 KYSHIQWTPSVAHSLSLALENICAAKNAENVVFKDCHWISEVIGDAKMINDFISNHSMVL 338
Y + W P AH + LE F WI E+I A+ + I NHS VL
Sbjct: 344 VYPSLYWVPCAAHCIDKMLEE-----------FGKMDWIREIIEQARTVTRIIYNHSGVL 392
Query: 339 SMISEFS 345
+++ +F+
Sbjct: 393 NLMRKFT 399
>AT4G08267.1 | chr4:5216854-5217697 FORWARD LENGTH=127
Length = 126
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 57/97 (58%), Gaps = 5/97 (5%)
Query: 261 VITDNDPFCRAAGVLIEQKYSHIQWTPSVAHSLSLALENICA----AKNAENVVFKDCHW 316
V+T+N +G LI K+S I WTP V H+L+LAL+N CA +N E VV+K C+W
Sbjct: 15 VVTNNASNYVKSGALISAKFSTIFWTPCVVHTLNLALKNTCAPSLSTRNNE-VVYKACYW 73
Query: 317 ISEVIGDAKMINDFISNHSMVLSMISEFSKLKILGIA 353
I + + I + I N+ + L M +E LK+L I+
Sbjct: 74 IKFISENVTWIKNSIMNYGVRLVMFTEHCDLKLLTIS 110
>AT3G13020.1 | chr3:4166995-4168917 REVERSE LENGTH=606
Length = 605
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 114/255 (44%), Gaps = 26/255 (10%)
Query: 110 GFTAEEDEHQDDQPS----LVTQMFFSIGLSPTITRNPYYRGSFAMVALFQIPGYVPPGV 165
G A E ++QD S + + F+ + + +P ++ M+ + +P
Sbjct: 108 GNVAVEVDNQDLLSSKAQKCIGRFFYEHCVDLSAVDSPCFK---EMMMALGVGQKIPDSH 164
Query: 166 DQLKTTLLQKERADIENMLQTIKNTWRKAGVTIVSDGWSDFKRRPIINIIAVNEAGPVFL 225
D L LLQ+ ++++ ++ IK++W+ G +I+ D W D K +++ +A AGPV+L
Sbjct: 165 D-LNGRLLQEAMKEVQDYVKNIKDSWKITGCSILLDAWIDPKGHDLVSFVADCPAGPVYL 223
Query: 226 QAINNEDGWMWMMDDYIA--EKLIAAIEDVGSENVVQVI-TDNDPFCRAAGVLIEQKYSH 282
++I+ + +D A + +E+VG NV Q+I + G L
Sbjct: 224 KSIDVS----VVKNDVTALLSLVNGLVEEVGVHNVTQIIACSTSGWVGELGKLFSGHDRE 279
Query: 283 IQWTPSVAHSLSLALENICAAKNAENVVFKDCHWISEVIGDAKMINDFISNHSMVLSMIS 342
+ W+ S++H L L I ++ +++ I +FI+N+ L +
Sbjct: 280 VFWSVSLSHCFELMLVKIGKMRS-----------FGDILDKVNTIWEFINNNPSALKIYR 328
Query: 343 EFSKLKILGIAHTRF 357
+ S K + ++ + F
Sbjct: 329 DQSHGKDITVSSSEF 343
>AT3G13010.1 | chr3:4162931-4164733 REVERSE LENGTH=573
Length = 572
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 110/250 (44%), Gaps = 28/250 (11%)
Query: 104 RATSMPGFTAEEDEHQDDQPSL--VTQMFFSIGLSPTITRNPYYRGSFAMVALF-QIPGY 160
R S GFTA E + ++ + V Q F+ G+ + + ++ + + + G
Sbjct: 75 RGRSNKGFTASETAAEAEKLAQMDVAQFFYEHGVDFSAVDSTSFKKMMMIKTVGGEGGGQ 134
Query: 161 VPPGVDQLKTTLLQKERADIENMLQTIKNTWRKAGVTIVSDGWSDFKRRPIINIIAVNEA 220
+ P L + Q+ +++ ++ IK +W G +I+ D W K R ++ +A A
Sbjct: 135 MIPDSRDLNGWMFQEALKKVQDRVKEIKASWEITGCSILFDAWIGPKGRDLVTFVADCPA 194
Query: 221 GPVFLQAINNEDGWMWMMDDYIA-EKLIAAI-EDVGSENVVQVITDNDPFCRAAGV---L 275
G V+L++ + D + D A L+ I E+VG NV Q+I C +G L
Sbjct: 195 GAVYLKSADVSD----IKTDVTALTSLVNGIVEEVGVRNVTQIIA-----CSTSGWVGDL 245
Query: 276 IEQKYSHIQWTPSVAHSLSLALENICAAKNAENVVFKDCHWISEVIGDAKMINDFISNHS 335
+Q + W+ S+++ L L L I + E++ K K++ D I+N+
Sbjct: 246 GKQLAGQVFWSVSLSYCLKLMLVEIGKMYSFEDIFEK-----------VKLLLDLINNNP 294
Query: 336 MVLSMISEFS 345
L + E S
Sbjct: 295 SFLYVFRENS 304
>AT3G13030.1 | chr3:4169675-4171417 REVERSE LENGTH=545
Length = 544
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 7/131 (5%)
Query: 173 LQKERADIENMLQTIKNTWRKAGVTIVSDGWSDFKRRPIINIIAVNEAGPVFLQAINNED 232
LQ ++++ ++ IK +W G +I+ D W D K R ++ +A AG V+L + + D
Sbjct: 98 LQDALEEVQDRVEKIKESWAITGCSILLDAWVDQKGRDLVTFVADCPAGLVYLISFDVSD 157
Query: 233 GWMWMMDDYIA--EKLIAAIEDVGSENVVQVI-TDNDPFCRAAGVLIEQKYSHIQWTPSV 289
DD A + +E+VG NV Q+I + G L + W+ SV
Sbjct: 158 ----FKDDVTALLSLVNGLVEEVGVRNVTQIIACSTSGWVGELGELFAGHDREVFWSVSV 213
Query: 290 AHSLSLALENI 300
+H L L I
Sbjct: 214 SHCFELMLVKI 224
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.132 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,898,861
Number of extensions: 322808
Number of successful extensions: 835
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 825
Number of HSP's successfully gapped: 10
Length of query: 370
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 270
Effective length of database: 8,364,969
Effective search space: 2258541630
Effective search space used: 2258541630
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 112 (47.8 bits)