BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0408900 Os05g0408900|AK064944
(720 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G15560.1 | chr4:8884218-8887254 FORWARD LENGTH=718 1167 0.0
AT3G21500.2 | chr3:7573907-7576594 REVERSE LENGTH=642 962 0.0
AT5G11380.1 | chr5:3630172-3633250 FORWARD LENGTH=701 724 0.0
AT5G50850.1 | chr5:20689671-20692976 FORWARD LENGTH=364 58 1e-08
>AT4G15560.1 | chr4:8884218-8887254 FORWARD LENGTH=718
Length = 717
Score = 1167 bits (3019), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 558/654 (85%), Positives = 595/654 (90%)
Query: 59 EAAEYHSQRPPTPLLDTVNYPIHMKNLSLKELQQLADELRSDVIFHVSKTGGHLGSSLGV 118
E EY+S RPPTPLLDT+NYPIHMKNLS+KEL+QL+DELRSDVIF+VSKTGGHLGSSLGV
Sbjct: 63 EKGEYYSNRPPTPLLDTINYPIHMKNLSVKELKQLSDELRSDVIFNVSKTGGHLGSSLGV 122
Query: 119 VELTVALHYVFNTPQDKILWDVGHQSYPHKILTGRRDKMPTMRQTNGLSGFTKRSESEYD 178
VELTVALHY+FNTPQDKILWDVGHQSYPHKILTGRR KMPTMRQTNGLSGFTKR ESE+D
Sbjct: 123 VELTVALHYIFNTPQDKILWDVGHQSYPHKILTGRRGKMPTMRQTNGLSGFTKRGESEHD 182
Query: 179 SFGTGHSSTTISAALGMAVGRDLKGGKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIV 238
FGTGHSSTTISA LGMAVGRDLKG NNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIV
Sbjct: 183 CFGTGHSSTTISAGLGMAVGRDLKGKNNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIV 242
Query: 239 ILNDNKQVSLPTATLDGPAPPVGXXXXXXXXXXXXRPLRELREVAKGVTKQIGGSVHELA 298
ILNDNKQVSLPTATLDGP+PPVG LRELREVAKG+TKQIGG +H+LA
Sbjct: 243 ILNDNKQVSLPTATLDGPSPPVGALSSALSRLQSNPALRELREVAKGMTKQIGGPMHQLA 302
Query: 299 AKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNIDDLITILREVKSTKTTGPVLIHVVT 358
AKVDEYARGMISG+GS+LFEELGLYYIGPVDGHNIDDL+ IL+EVKST+TTGPVLIHVVT
Sbjct: 303 AKVDEYARGMISGTGSSLFEELGLYYIGPVDGHNIDDLVAILKEVKSTRTTGPVLIHVVT 362
Query: 359 EKGRGYPYAERAADKYHGVAKFDPATGKQFKSPAKTLSYTNYFAEALIAEAEQDNRVVAI 418
EKGRGYPYAERA DKYHGV KFDPATG+QFK+ KT SYT YFAEAL+AEAE D VVAI
Sbjct: 363 EKGRGYPYAERADDKYHGVVKFDPATGRQFKTTNKTQSYTTYFAEALVAEAEVDKDVVAI 422
Query: 419 HAAMGGGTGLNYFLRRFPNRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFLQRGYDQ 478
HAAMGGGTGLN F RRFP RCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSF+QR YDQ
Sbjct: 423 HAAMGGGTGLNLFQRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQ 482
Query: 479 VVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTYMACLPNMVVMAPSDEAELCHMVA 538
VVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVT+MACLPNM+VMAPSDEA+L +MVA
Sbjct: 483 VVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMACLPNMIVMAPSDEADLFNMVA 542
Query: 539 TAAAIDDRPSCFRYPRGNGIGVPLPPNYKGVPLEVGKGRVLLEGERVALLGYGSAVQYCL 598
TA AIDDRPSCFRYPRGNGIGV LPP KGVP+E+GKGR+L EGERVALLGYGSAVQ CL
Sbjct: 543 TAVAIDDRPSCFRYPRGNGIGVALPPGNKGVPIEIGKGRILKEGERVALLGYGSAVQSCL 602
Query: 599 AAASLVERHGLKVTVADARFCKPLDQTLIRRLASSHEVLLTVEEGSIGGFGSHVAQFMAL 658
AA ++E GL VTVADARFCKPLD+ LIR LA SHEVL+TVEEGSIGGFGSHV QF+AL
Sbjct: 603 GAAVMLEERGLNVTVADARFCKPLDRALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAL 662
Query: 659 DGLLDGKLKWRPLVLPDRYIDHGSPADQLAEAGLTPSHIAATVFNVLGQAREAL 712
DGLLDGKLKWRP+VLPDRYIDHG+PADQLAEAGL PSHIAAT N++G REAL
Sbjct: 663 DGLLDGKLKWRPMVLPDRYIDHGAPADQLAEAGLMPSHIAATALNLIGAPREAL 716
>AT3G21500.2 | chr3:7573907-7576594 REVERSE LENGTH=642
Length = 641
Score = 962 bits (2487), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/612 (76%), Positives = 515/612 (84%), Gaps = 32/612 (5%)
Query: 56 TEREAAEYHSQRPPTPLLDTVNYPIHMKNLSLKELQQLADELRSDVIFHVSKTGGHLGSS 115
T E EY+S RPPTPLLDT+N+P+HMKNLS+KEL+ L+DELRSDVIF+VSKTGGHLGS+
Sbjct: 50 TFSEKGEYYSNRPPTPLLDTINHPMHMKNLSIKELKVLSDELRSDVIFNVSKTGGHLGSN 109
Query: 116 LGVVELTVALHYVFNTPQDKILWDVGHQSYPHKILTGRRDKMPTMRQTNGLSGFTKRSES 175
LGVVELTVALHY+FNTP DKILWDVGHQSYPHKILTGRR KM T+RQTNGLSG+TKR ES
Sbjct: 110 LGVVELTVALHYIFNTPHDKILWDVGHQSYPHKILTGRRGKMKTIRQTNGLSGYTKRRES 169
Query: 176 EYDSFGTGHSSTTISAALGMAVGRDLKGGKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSD 235
E+DSFGTGHSSTT+SA LGMAVGRDLKG N+VV+VIGDGAMTAGQAYEAMNNAGYL S+
Sbjct: 170 EHDSFGTGHSSTTLSAGLGMAVGRDLKGMNNSVVSVIGDGAMTAGQAYEAMNNAGYLHSN 229
Query: 236 MIVILNDNKQVSLPTATLDGPAPPVGXXXXXXXXXXXXRPLRELREVAKGVTKQIGGSVH 295
MIVILNDNKQVSLPTA LDGP PVG + ++
Sbjct: 230 MIVILNDNKQVSLPTANLDGPTQPVGA---------------------------LSCALS 262
Query: 296 ELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNIDDLITILREVKSTKTTGPVLIH 355
L + GMI + STLFEELG +Y+GPVDGHNIDDL++IL +KSTKT GPVLIH
Sbjct: 263 RLQSNC-----GMIRETSSTLFEELGFHYVGPVDGHNIDDLVSILETLKSTKTIGPVLIH 317
Query: 356 VVTEKGRGYPYAERAADKYHGVAKFDPATGKQFKSPAKTLSYTNYFAEALIAEAEQDNRV 415
VVTEKGRGYPYAERA DKYHGV KFDP TGKQFK+ +KT SYT+ F EALIAEAE D +
Sbjct: 318 VVTEKGRGYPYAERADDKYHGVLKFDPETGKQFKNISKTQSYTSCFVEALIAEAEADKDI 377
Query: 416 VAIHAAMGGGTGLNYFLRRFPNRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFLQRG 475
VAIHAAMGGGT LN F RFP RCFDVGIAEQHAVTFAAGLACEGLKPFC IYSSF+QR
Sbjct: 378 VAIHAAMGGGTMLNLFESRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCTIYSSFMQRA 437
Query: 476 YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTYMACLPNMVVMAPSDEAELCH 535
YDQVVHDVDLQKLPVRFA+DRAGL+GADGPTHCGAFDVT+MACLPNM+VMAPSDEAEL +
Sbjct: 438 YDQVVHDVDLQKLPVRFAIDRAGLMGADGPTHCGAFDVTFMACLPNMIVMAPSDEAELFN 497
Query: 536 MVATAAAIDDRPSCFRYPRGNGIGVPLPPNYKGVPLEVGKGRVLLEGERVALLGYGSAVQ 595
MVATAAAIDDRPSCFRY RGNGIGV LPP KGVPL++G+GR+L +GERVALLGYGSAVQ
Sbjct: 498 MVATAAAIDDRPSCFRYHRGNGIGVSLPPGNKGVPLQIGRGRILRDGERVALLGYGSAVQ 557
Query: 596 YCLAAASLVERHGLKVTVADARFCKPLDQTLIRRLASSHEVLLTVEEGSIGGFGSHVAQF 655
CL AAS++ GLK+TVADARFCKPLD LIR LA SHEVL+TVEEGSIGGFGSHV QF
Sbjct: 558 RCLEAASMLSERGLKITVADARFCKPLDVALIRSLAKSHEVLITVEEGSIGGFGSHVVQF 617
Query: 656 MALDGLLDGKLK 667
+ALDGLLDGKLK
Sbjct: 618 LALDGLLDGKLK 629
>AT5G11380.1 | chr5:3630172-3633250 FORWARD LENGTH=701
Length = 700
Score = 724 bits (1870), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/660 (55%), Positives = 466/660 (70%), Gaps = 33/660 (5%)
Query: 63 YHSQRPPTPLLDTVNYPIHMKNLSLKELQQLADELRSD---VIFHVSKTGGHLGSSLGVV 119
Y ++ TP+LD++ P+ +KNLS+KEL+ LADE+R++ V++ KT + S +
Sbjct: 68 YCDEKFETPILDSIETPLQLKNLSVKELKLLADEIRTELHSVLW--KKTQKSMNPSFAAI 125
Query: 120 ELTVALHYVFNTPQDKILWDVGHQSYPHKILTGRRDKMPTMRQTNGLSGFTKRSESEYDS 179
ELT+ALHYVF P D ILWD Q+Y HK+LT R +P+ RQ +G+SG T R ESEYDS
Sbjct: 126 ELTLALHYVFRAPVDNILWDAVEQTYAHKVLTRRWSAIPS-RQNSGISGVTSRLESEYDS 184
Query: 180 FGTGHSSTTISAALGMAVGRDLKGGKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVI 239
FGTGH +ISA LG+AV RD+KG ++ VVAVI + +TAGQAYEAM+NAGYLDS+MIVI
Sbjct: 185 FGTGHGCNSISAGLGLAVARDMKGKRDRVVAVIDNVTITAGQAYEAMSNAGYLDSNMIVI 244
Query: 240 LNDNKQVSLPTATLDGPAPPVGXXXXXXXXXXXXRPLRELREVAKGVTKQIGGSVHELAA 299
LND++ SL +G + + R+ RE+AK +TK+IG ++E AA
Sbjct: 245 LNDSRH-SLHPNMEEGSKASISALSSIMSKIQSSKVFRKFRELAKAMTKRIGKGMYEWAA 303
Query: 300 KVDEYARGMISGSGSTLFEELGLYYIGPVDGHNIDDLITILREVKSTKTTGPVLIHVVTE 359
KVDEYARGM+ +GSTLFEELGLYYIGPVDGHNI+DL+ +LREV S + GPVL+HV+TE
Sbjct: 304 KVDEYARGMVGPTGSTLFEELGLYYIGPVDGHNIEDLVCVLREVSSLDSMGPVLVHVITE 363
Query: 360 KGRGYPYAERAADKYHGVAKFDPATGKQFKSPAKTLSYTNYFAEALIAEAEQDNRVVAIH 419
R D T K + +Y++ F EAL+ EAE+D +V +H
Sbjct: 364 GNR------------------DAETVKNIMVKDRR-TYSDCFVEALVMEAEKDRDIVVVH 404
Query: 420 AAMGGGTGLNYFLRRFPNRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFLQRGYDQV 479
A M L F RFP+R F+VG+AEQHAVTF+AGL+ GLKPFC I S+FLQR YDQV
Sbjct: 405 AGMEMDPSLLTFQERFPDRFFNVGMAEQHAVTFSAGLSSGGLKPFCIIPSAFLQRAYDQV 464
Query: 480 VHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTYMACLPNMVVMAPSDEAELCHMVAT 539
VHDVD Q+ VRF + AGLVG+DGP CGAFD+ +M+ LPNM+ MAP+DE EL +MVAT
Sbjct: 465 VHDVDRQRKAVRFVITSAGLVGSDGPVQCGAFDIAFMSSLPNMIAMAPADEDELVNMVAT 524
Query: 540 AAAIDDRPSCFRYPRGNGIGVPLPPNY---KGVPLEVGKGRVLLEGERVALLGYGSAVQY 596
AA + DRP CFR+PRG+ + + NY G+P+E+G+GRVL+EG+ VALLGYG+ VQ
Sbjct: 525 AAYVTDRPVCFRFPRGSIVNM----NYLVPTGLPIEIGRGRVLVEGQDVALLGYGAMVQN 580
Query: 597 CLAAASLVERHGLKVTVADARFCKPLDQTLIRRLASSHEVLLTVEEGSIGGFGSHVAQFM 656
CL A SL+ + GL VTVADARFCKPLD L+R L +H+ L+TVEEG +GGFGSHVAQF+
Sbjct: 581 CLHAHSLLSKLGLNVTVADARFCKPLDIKLVRDLCQNHKFLITVEEGCVGGFGSHVAQFI 640
Query: 657 ALDGLLDGKLKWRPLVLPDRYIDHGSPADQLAEAGLTPSHIAATVFNVLGQAREALAIMT 716
ALDG LDG +KWRP+VLPD YI+ SP +QLA AGLT HIAAT ++LG+ REAL +M+
Sbjct: 641 ALDGQLDGNIKWRPIVLPDGYIEEASPREQLALAGLTGHHIAATALSLLGRTREALLLMS 700
>AT5G50850.1 | chr5:20689671-20692976 FORWARD LENGTH=364
Length = 363
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 108/282 (38%), Gaps = 20/282 (7%)
Query: 379 KFDPATGKQFKSPAKTLSYTNYFAEALIAEAEQDNRVVAIHAAMGGGTG----LNYFLRR 434
+F + + + + AK ++ + A+ E D +V + +G G L +
Sbjct: 20 RFALVSARSYAAGAKEMTVRDALNSAIDEEMSADPKVFVMGEEVGQYQGAYKITKGLLEK 79
Query: 435 F-PNRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYS-SFLQRGYDQVVHDVDLQK----- 487
+ P R +D I E G A GLKP + +F + D +++
Sbjct: 80 YGPERVYDTPITEAGFTGIGVGAAYAGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSAG 139
Query: 488 ---LPVRFAMDRAGLVGADGPTHCGAFDVTYMACLPNMVVMAPSDEAELCHMVATAAAID 544
+P+ F G G H + Y A +P + V+AP AE + AA D
Sbjct: 140 QINVPIVFRGPNGAAAGV-GAQHSQCYAAWY-ASVPGLKVLAPYS-AEDARGLLKAAIRD 196
Query: 545 DRPSCF---RYPRGNGIGVPLPPNYKGVPLEVGKGRVLLEGERVALLGYGSAVQYCLAAA 601
P F G + L +GK ++ EG+ V ++ + V + L AA
Sbjct: 197 PDPVVFLENELLYGESFPISEEALDSSFCLPIGKAKIEREGKDVTIVTFSKMVGFALKAA 256
Query: 602 SLVERHGLKVTVADARFCKPLDQTLIRRLASSHEVLLTVEEG 643
+ G+ V + R +PLD+ I L+TVEEG
Sbjct: 257 EKLAEEGISAEVINLRSIRPLDRATINASVRKTSRLVTVEEG 298
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.136 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 15,283,274
Number of extensions: 649649
Number of successful extensions: 1470
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 1464
Number of HSP's successfully gapped: 5
Length of query: 720
Length of database: 11,106,569
Length adjustment: 106
Effective length of query: 614
Effective length of database: 8,200,473
Effective search space: 5035090422
Effective search space used: 5035090422
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 115 (48.9 bits)