BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0406200 Os05g0406200|Os05g0406200
(887 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G18860.1 | chr5:6291023-6295581 FORWARD LENGTH=891 994 0.0
AT5G18890.1 | chr5:6301652-6304088 FORWARD LENGTH=551 574 e-164
AT5G18870.1 | chr5:6298386-6300289 FORWARD LENGTH=259 230 3e-60
AT2G36310.1 | chr2:15224692-15226633 REVERSE LENGTH=337 57 5e-08
>AT5G18860.1 | chr5:6291023-6295581 FORWARD LENGTH=891
Length = 890
Score = 994 bits (2571), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/827 (59%), Positives = 605/827 (73%), Gaps = 14/827 (1%)
Query: 70 AVTIDVNAWTDAGHAVNHLYDMLYMMXXXXXXXXXXXXXXXXXXXXXHPNVGGYLPLIDQ 129
+T+ NAWT+AGHAVN +YD+L+MM H +VGGY P+I+Q
Sbjct: 63 GITLSANAWTNAGHAVNQVYDLLHMMDRDDIPVGVGGEGGISDDGTIHSDVGGYFPIIEQ 122
Query: 130 GMTTFGPCRYRQAIPLEGGGRLDIDTNSGIRKGFLPQGNRRYIPLHQSTAQQVLIETISA 189
GMTT G CRYRQAIP GG LDID+N G RK FLPQGNRRY PL Q TAQ+V+++ IS
Sbjct: 123 GMTTTGECRYRQAIPKGLGGLLDIDSNYGFRKQFLPQGNRRYTPLQQPTAQKVIVDKISE 182
Query: 190 GPTTVMLIGSHTNFAIFLMTHPHLKKNVEHIYIMGGGVRSENPTGCCPKNSTTS-CTPQQ 248
GPTTV+L+GSHTNFA+FLM++PHLK N++HIYIMGGGVRS+NPTGCCP NST + C P+Q
Sbjct: 183 GPTTVILLGSHTNFALFLMSNPHLKHNIQHIYIMGGGVRSQNPTGCCPANSTVAECQPRQ 242
Query: 249 CGDHGNLFTSYRTNPNAEFNMFADPFAAYQVFHSGIAITLVPLDATNTIPVNEEFFYAFQ 308
CG+ GNLFT Y +NP +EFN+FADPFAAYQVFHSG+ +TLVPLDATNTIP+N++FF F+
Sbjct: 243 CGNRGNLFTDYTSNPYSEFNIFADPFAAYQVFHSGVPVTLVPLDATNTIPINQKFFETFE 302
Query: 309 QQ-QSTYEAQYCFDSLKMARDTWFNDEFYTSYFMWDSFTSGVALSSMRND---NNCQSEN 364
Q TYEAQY F SLK+ARDTWF+DEFY SYFMWDSFT+GVA+S MRN NN EN
Sbjct: 303 NNYQRTYEAQYVFLSLKIARDTWFDDEFYKSYFMWDSFTAGVAVSIMRNSANKNNKNGEN 362
Query: 365 DFAELKYMNITVITSNKPYGIHDGSNPLFDDHVIPKFGLQKGGVHSGHVQTGITDSFCLA 424
DFAE++YMNITV+TSNKPYG DGSNP FD+ PKF L GGVHSGHVQTG+ D CL
Sbjct: 363 DFAEMEYMNITVVTSNKPYGRSDGSNPFFDNRRTPKFNLALGGVHSGHVQTGLRDPTCLP 422
Query: 425 KES-KKGRCEDGYTKEESGPEAVRVCVATKAKVNVDKSSLLDREFFKSFLETLNLPENTG 483
K +G+C+DGYT+E SG ++VRV VAT+AK N++ S LDREF+ FLE LN PE TG
Sbjct: 423 KSGIGRGKCKDGYTQEISGSDSVRVLVATRAKPNINIKSKLDREFYVDFLEVLNRPEETG 482
Query: 484 LFNITAQFPFYREVLYSPDFTNKSRGKPVIFDMDMSPGDFISLIYLLKVPTELIDLKGIL 543
FN ++QFP+Y+E L+ PD + GKPV+FDMDMS GDF+SL YLLKVP + IDLK I+
Sbjct: 483 RFNFSSQFPYYKEELFRPDLSKTRPGKPVVFDMDMSAGDFLSLFYLLKVPVDKIDLKAII 542
Query: 544 VSGNGWANVASIDIVYDILHMMGRDDIPVGRGSTSALGTESL------GCKYVSAIPQGS 597
VS GWAN A+ID+VYD+LHMMGRDDIPVG G AL GCKYV AIP+G
Sbjct: 543 VSPTGWANAATIDVVYDLLHMMGRDDIPVGLGDMLALNQSDPIFPPVGGCKYVKAIPRGC 602
Query: 598 GGLLDSDTLYGLARSLPRSPRRYTAENSVKYGAPRDTDHPELRQPLAFEVWQFVKHQLDP 657
GG LDSDTLYGLAR LPRSPRRYTAENSV +GAPRDTD PELRQPLA EVWQ + +
Sbjct: 603 GGFLDSDTLYGLARDLPRSPRRYTAENSVTHGAPRDTDRPELRQPLAIEVWQNLTKSGNG 662
Query: 658 NEKITILTNGPLTNLANIVLSDRNASSVIKSVYVVGGHIRDDSNTKGNVFSVPSNTYAEF 717
KIT+LTNGPLTNLA I+ SD+ +SS+IK VY+VGGHI + + KGN+F++PSN YAEF
Sbjct: 663 VSKITVLTNGPLTNLAKIISSDKKSSSLIKEVYIVGGHINREKSDKGNIFTIPSNAYAEF 722
Query: 718 NIFLDPLAAKTVLDSTLDITLIPLRAQRKAASFHALLEAL-KHAETPESRFVXXXXXXXX 776
N+FLDPLAAKTVL+S L+ITL+PL Q K +SF +L+ L +TPE+RFV
Sbjct: 723 NMFLDPLAAKTVLESALNITLVPLATQHKLSSFQTMLDRLYSSTKTPEARFVKRLLVRLQ 782
Query: 777 XXXXXXXXXXXMDMFLGELLGAVSL-VEGSNIKQSLQRKPISIVANSTTSIDGQTVVDNQ 835
+DMFLGE+LGAV L + +++K ++ + I ++A S DG+ ++D
Sbjct: 783 ALHQKHRRYTHIDMFLGEVLGAVLLGGDDASLKPKMRAEHIKVIAEGDESRDGKILIDKL 842
Query: 836 SANLVKVLLDFNSEEYYKRVANSLGDKERSAVISGFAEQRAIWSNPP 882
+K+L + + A+ L DK++SAVI F EQ+ IWS PP
Sbjct: 843 RGKQIKILERVDLISISESFASRLDDKKQSAVIGSFEEQKKIWSTPP 889
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 136/288 (47%), Gaps = 64/288 (22%)
Query: 525 SLIYLLKVPTELIDLKGILVSGNGWANVA-SIDIVYDILHMMGRDDIPVGRGSTSAL--- 580
+++YLLK+ DL GI +S N W N +++ VYD+LHMM RDDIPVG G +
Sbjct: 47 AILYLLKLNKSEFDLVGITLSANAWTNAGHAVNQVYDLLHMMDRDDIPVGVGGEGGISDD 106
Query: 581 ----------------GTESLG-CKYVSAIPQGSGGLLDSDTLYGLARS-LPRSPRRYTA 622
G + G C+Y AIP+G GGLLD D+ YG + LP+ RRYT
Sbjct: 107 GTIHSDVGGYFPIIEQGMTTTGECRYRQAIPKGLGGLLDIDSNYGFRKQFLPQGNRRYTP 166
Query: 623 ENSVKYGAPRDTDHPELRQPLAFEVWQFVKHQLDPNEKITILTNGPLTNLANIVLSDRNA 682
L+QP A +V + ++ IL G TN A ++S+ +
Sbjct: 167 ----------------LQQPTAQKV---IVDKISEGPTTVILL-GSHTNFALFLMSNPHL 206
Query: 683 SSVIKSVYVVGGHIRDDSNT-------------------KGNVFS-VPSNTYAEFNIFLD 722
I+ +Y++GG +R + T +GN+F+ SN Y+EFNIF D
Sbjct: 207 KHNIQHIYIMGGGVRSQNPTGCCPANSTVAECQPRQCGNRGNLFTDYTSNPYSEFNIFAD 266
Query: 723 PLAAKTVLDSTLDITLIPLRAQRKAASFHALLEALK--HAETPESRFV 768
P AA V S + +TL+PL A E + + T E+++V
Sbjct: 267 PFAAYQVFHSGVPVTLVPLDATNTIPINQKFFETFENNYQRTYEAQYV 314
>AT5G18890.1 | chr5:6301652-6304088 FORWARD LENGTH=551
Length = 550
Score = 574 bits (1480), Expect = e-164, Method: Compositional matrix adjust.
Identities = 295/529 (55%), Positives = 368/529 (69%), Gaps = 13/529 (2%)
Query: 363 ENDFAELKYMNITVITSNKPYGIHDGSNPLFDDHVIPKFGLQKGGVHSGHVQTGITDSFC 422
+NDFAE++YMNITV+TSN+PYG+ D SNP F PKF L GGVHSGHVQ G+ D C
Sbjct: 15 QNDFAEMEYMNITVVTSNEPYGLFDSSNPFFYKRRTPKFNLTLGGVHSGHVQRGLRDPIC 74
Query: 423 LAKESKKGRCEDGYTKEESGPEAVRVCVATKAKVNVDKSSLLDREFFKSFLETLNLPENT 482
++ S KG C DGYTKE SGP++VRV VAT+AK + + +S LDREF+ FLE LN PE T
Sbjct: 75 IST-SGKGNCRDGYTKETSGPDSVRVLVATRAKPSKNLNSELDREFYDHFLEVLNRPEET 133
Query: 483 GLFNITAQFPFYREVLYSPDFTN-KSRGKPVIFDMDMSPGDFISLIYLLKVPTELIDLKG 541
G F+ + QF +YRE L+ + N + GKPV+FDMDMS GDF+SL YLLKVP E+IDLK
Sbjct: 134 GRFHFSTQFLYYREELFIAELNNSRLGGKPVVFDMDMSAGDFLSLFYLLKVPVEIIDLKA 193
Query: 542 ILVSGNGWANVASIDIVYDILHMMGRDDIPVGRGSTSALGTE-----SLG-CKYVSAIPQ 595
++VS GWAN A+ID+VYD+LHMMGRDDIPVG G A+ S G CKY A+PQ
Sbjct: 194 VIVSPTGWANTATIDVVYDLLHMMGRDDIPVGLGDMFAINQSEPVFPSAGDCKYAKAVPQ 253
Query: 596 GSGGLLDSDTLYGLARSLPRSPRRYTAENSVKYGAPRDTDHPELRQPLAFEVWQFVKHQL 655
G GG LDSDTLYGLAR LPRSPRRY ENSV +GAP DTD PELRQPLA EVWQ + +
Sbjct: 254 GCGGFLDSDTLYGLARDLPRSPRRY--ENSVAHGAPSDTDRPELRQPLALEVWQNLTKSV 311
Query: 656 DPNEKITILTNGPLTNLANIVLSDRNASSVIKSVYVVGGHIRDDSNTKGNVFSVPSNTYA 715
D KIT+LTNGPLT+LA I+ SD+N+SS+IK VY+VGGHI + KGN+F+VPSN+YA
Sbjct: 312 DEVSKITVLTNGPLTSLAKIISSDKNSSSIIKEVYIVGGHISRGKSDKGNIFTVPSNSYA 371
Query: 716 EFNIFLDPLAAKTVLDSTLDITLIPLRAQRKAASFHALLEAL-KHAETPESRFVXXXXXX 774
EFN+FLDPLAAKTVL+S L+ITLIPL QR+ SF A+L L +TPE+RFV
Sbjct: 372 EFNMFLDPLAAKTVLESGLNITLIPLATQRE-FSFQAMLNRLYSSTKTPEARFVKRLLTR 430
Query: 775 XXXXXXXXXXXXXMDMFLGELLGAVSL-VEGSNIKQSLQRKPISIVANSTTSIDGQTVVD 833
MDMFLGE+LGA+ L + + +K ++ + I ++A S DG ++D
Sbjct: 431 LQALHQKQRRYMHMDMFLGEILGAIFLGGDHALLKPKMRTEYIKVIAEGDESKDGHILID 490
Query: 834 NQSANLVKVLLDFNSEEYYKRVANSLGDKERSAVISGFAEQRAIWSNPP 882
+K+L + Y+ A+ L DK++SAVI F EQR W+ PP
Sbjct: 491 KLRGKQIKILERVDLRGCYESFASRLDDKKQSAVIGSFEEQRMKWNTPP 539
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 98/244 (40%), Gaps = 59/244 (24%)
Query: 69 QAVTIDVNAWTDAGHAVNHLYDMLYMMXXXXXXXXXXXXXXXXXXXXXHPNVGGYLPLID 128
+AV + W + ++ +YD+L+MM P G + I+
Sbjct: 192 KAVIVSPTGWANTA-TIDVVYDLLHMMGRDDI-----------------PVGLGDMFAIN 233
Query: 129 QGMTTF---GPCRYRQAIPLEGGGRLDIDTNSGIRKGFLPQGNRRY-------------- 171
Q F G C+Y +A+P GG LD DT G+ + LP+ RRY
Sbjct: 234 QSEPVFPSAGDCKYAKAVPQGCGGFLDSDTLYGLARD-LPRSPRRYENSVAHGAPSDTDR 292
Query: 172 ----IPLHQSTAQQVLIETISAGPTTVMLIGSHTNFAIFLMTHPHLKKNVEHIYIMGGGV 227
PL Q + TV+ G T+ A + + + ++ +YI+GG +
Sbjct: 293 PELRQPLALEVWQNLTKSVDEVSKITVLTNGPLTSLAKIISSDKNSSSIIKEVYIVGGHI 352
Query: 228 RSENPTGCCPKNSTTSCTPQQCGDHGNLFTSYRTNPNAEFNMFADPFAAYQVFHSGIAIT 287
+ D GN+FT +N AEFNMF DP AA V SG+ IT
Sbjct: 353 ------------------SRGKSDKGNIFT-VPSNSYAEFNMFLDPLAAKTVLESGLNIT 393
Query: 288 LVPL 291
L+PL
Sbjct: 394 LIPL 397
>AT5G18870.1 | chr5:6298386-6300289 FORWARD LENGTH=259
Length = 258
Score = 230 bits (586), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 111/212 (52%), Positives = 141/212 (66%), Gaps = 20/212 (9%)
Query: 70 AVTIDVNAWTDAGHAVNHLYDMLYMMXXXXXXXXXXXXXXXXXXXXXHPNVGGYLPLIDQ 129
+T+ N+WT+AGH VNH+YD+LYMM P+VG YLP+I+Q
Sbjct: 60 GITLSANSWTNAGHGVNHIYDILYMMGRDDITVGVGGEGGILEDGTILPDVGDYLPIIEQ 119
Query: 130 GMTTFGPCRYRQAIPLEGGGRLD-IDTNSGIRKGFLPQGNRRYIPLHQSTAQQVLIETIS 188
GMTT G CRYRQ+IP GR+ ID+N G RK FLPQGNRRY PL Q TAQ+V+++ +S
Sbjct: 120 GMTTAGGCRYRQSIP---KGRIQKIDSNYGFRKHFLPQGNRRYTPLEQPTAQKVIVDKVS 176
Query: 189 AGPTTVMLIGSHTNFAIFLMTHPHLKKNVEHIYIMGGGVRSENPTGCCPKNSTTSCTPQQ 248
GP ++ +IGSHTN A+F+M++PHLK N++HIY+MGG VR +NP G C
Sbjct: 177 EGPISIFVIGSHTNLALFMMSNPHLKHNIQHIYVMGGSVRCQNPNGFC------------ 224
Query: 249 CGDHGNLFTSYRTNPNAEFNMFADPFAAYQVF 280
GNLFT Y +NP AEFN+F DPFAAYQVF
Sbjct: 225 ----GNLFTDYTSNPYAEFNIFTDPFAAYQVF 252
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 83/233 (35%), Positives = 113/233 (48%), Gaps = 47/233 (20%)
Query: 523 FISLIYLLKVPTELIDLKGILVSGNGWANVA-SIDIVYDILHMMGRDDIPVGRGSTSAL- 580
FI+L+YLLK+ DL GI +S N W N ++ +YDIL+MMGRDDI VG G +
Sbjct: 42 FIALLYLLKLNKTEFDLVGITLSANSWTNAGHGVNHIYDILYMMGRDDITVGVGGEGGIL 101
Query: 581 -------------------GTESLGCKYVSAIPQGSGGLLDSDTLYGLARS-LPRSPRRY 620
T + GC+Y +IP+G +DS+ YG + LP+ RRY
Sbjct: 102 EDGTILPDVGDYLPIIEQGMTTAGGCRYRQSIPKGRIQKIDSN--YGFRKHFLPQGNRRY 159
Query: 621 TAENSVKYGAPRDTDHPELRQPLAFEVWQFVKHQLDPNEKITILTNGPLTNLANIVLSDR 680
T L QP A Q V I+I G TNLA ++S+
Sbjct: 160 TP----------------LEQPTA----QKVIVDKVSEGPISIFVIGSHTNLALFMMSNP 199
Query: 681 NASSVIKSVYVVGGHIR--DDSNTKGNVFS-VPSNTYAEFNIFLDPLAAKTVL 730
+ I+ +YV+GG +R + + GN+F+ SN YAEFNIF DP AA V
Sbjct: 200 HLKHNIQHIYVMGGSVRCQNPNGFCGNLFTDYTSNPYAEFNIFTDPFAAYQVF 252
>AT2G36310.1 | chr2:15224692-15226633 REVERSE LENGTH=337
Length = 336
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 99/227 (43%), Gaps = 47/227 (20%)
Query: 516 MDMSPGDFISLIYLLKVPTELIDLKGILVSGNGWANVASIDIVYDIL---HMMGRDDIPV 572
+D PG S+ L+ T +++ G+ + NV++ D + L + G D+PV
Sbjct: 26 IDTDPGIDDSMAILMAFQTPELEILGLTTV---FGNVSTQDATRNALLLCEIAGFPDVPV 82
Query: 573 GRGSTSALGTESLGCKYVSAIPQGSGGLLDSDTLYGLARSLPRSPRRYTAENSVKYGAPR 632
GS+ L G V+ G GL D SLP R+ + +++ ++ +
Sbjct: 83 AEGSSEPLKG---GIPRVADFVHGKNGLGDV--------SLPPPSRKKSEKSAAEFLDEK 131
Query: 633 DTDHPELRQPLAFEVWQFVKHQLDPNEKITILTNGPLTNLANIVLSDRNASSVIKSVYVV 692
++P ++TIL GPLTNLA + D + +S +K + ++
Sbjct: 132 VEEYPG---------------------EVTILALGPLTNLALAIKRDSSFASKVKKIVIL 170
Query: 693 GGHIRDDSNTKGNVFSVPSNTYAEFNIFLDPLAAKTVLDSTLDITLI 739
GG + GNV N AE NI+ DP AA V S DIT++
Sbjct: 171 GGAFF----SLGNV-----NPAAEANIYGDPEAADVVFTSGADITVV 208
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.135 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 18,854,245
Number of extensions: 810018
Number of successful extensions: 1659
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 1631
Number of HSP's successfully gapped: 7
Length of query: 887
Length of database: 11,106,569
Length adjustment: 107
Effective length of query: 780
Effective length of database: 8,173,057
Effective search space: 6374984460
Effective search space used: 6374984460
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 116 (49.3 bits)