BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0406100 Os05g0406100|AK069515
(746 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G18860.1 | chr5:6291023-6295581 FORWARD LENGTH=891 834 0.0
AT5G18890.1 | chr5:6301652-6304088 FORWARD LENGTH=551 591 e-169
AT5G18870.1 | chr5:6298386-6300289 FORWARD LENGTH=259 172 7e-43
AT2G36310.1 | chr2:15224692-15226633 REVERSE LENGTH=337 54 4e-07
AT1G05620.1 | chr1:1679286-1681527 FORWARD LENGTH=323 52 2e-06
>AT5G18860.1 | chr5:6291023-6295581 FORWARD LENGTH=891
Length = 890
Score = 834 bits (2154), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/770 (55%), Positives = 536/770 (69%), Gaps = 45/770 (5%)
Query: 8 QGTSTAGGCRYRQAVPAGRGGRLDVDTNSGVRRGFLPQGRRRYRPVTQPTAQRVMADTVS 67
QG +T G CRYRQA+P G GG LD+D+N G R+ FLPQG RRY P+ QPTAQ+V+ D +S
Sbjct: 122 QGMTTTGECRYRQAIPKGLGGLLDIDSNYGFRKQFLPQGNRRYTPLQQPTAQKVIVDKIS 181
Query: 68 GGPTTVLLFGAHTNLALLLMAHPRLARNIDRVYVSGGAVRAADPAG-------------- 113
GPTTV+L G+HTN AL LM++P L NI +Y+ GG VR+ +P G
Sbjct: 182 EGPTTVILLGSHTNFALFLMSNPHLKHNIQHIYIMGGGVRSQNPTGCCPANSTVAECQPR 241
Query: 114 ------NLFTAFATNPFAEFNIFGDPFAAYQVIHSGIPITMIPLDATNTISVTEEFVSEF 167
NLFT + +NP++EFNIF DPFAAYQV HSG+P+T++PLDATNTI + ++F F
Sbjct: 242 QCGNRGNLFTDYTSNPYSEFNIFADPFAAYQVFHSGVPVTLVPLDATNTIPINQKFFETF 301
Query: 168 QQ-HQQTYEAQYCFQSLDKVLMRLRGRSNGHGNTSYYMWDSFAAGVALSSMRNG----EV 222
+ +Q+TYEAQY F SL + + SY+MWDSF AGVA+S MRN
Sbjct: 302 ENNYQRTYEAQYVFLSLK---IARDTWFDDEFYKSYFMWDSFTAGVAVSIMRNSANKNNK 358
Query: 223 DGENEFSELEYMNITVITSNKPYGKRDGSNPFFDGRATPKLGLKEGGVHSGHVQTGIRDS 282
+GEN+F+E+EYMNITV+TSNKPYG+ DGSNPFFD R TPK L GGVHSGHVQTG+RD
Sbjct: 359 NGENDFAEMEYMNITVVTSNKPYGRSDGSNPFFDNRRTPKFNLALGGVHSGHVQTGLRDP 418
Query: 283 FCL-VPGSNRGRCEDGYTREVSGPEGVRVRVATRAKPNTDKNSSLEKEFSKSFLEVLNRP 341
CL G RG+C+DGYT+E+SG + VRV VATRAKPN + S L++EF FLEVLNRP
Sbjct: 419 TCLPKSGIGRGKCKDGYTQEISGSDSVRVLVATRAKPNINIKSKLDREFYVDFLEVLNRP 478
Query: 342 EQTGLFNINTQFPYYREVLYKPVFRNVSRGKPVIFDMDMSPGDFVSLIYLLKTPIEVIDL 401
E+TG FN ++QFPYY+E L++P GKPV+FDMDMS GDF+SL YLLK P++ IDL
Sbjct: 479 EETGRFNFSSQFPYYKEELFRPDLSKTRPGKPVVFDMDMSAGDFLSLFYLLKVPVDKIDL 538
Query: 402 KAVLVNGNGWANIASIDIVYDILHMMGRDDIPVGLGNTTALGI------PTLGCNNSYAI 455
KA++V+ GWAN A+ID+VYD+LHMMGRDDIPVGLG+ AL P GC AI
Sbjct: 539 KAIIVSPTGWANAATIDVVYDLLHMMGRDDIPVGLGDMLALNQSDPIFPPVGGCKYVKAI 598
Query: 456 PHGSGGFIDSDTLYGLARSLPRSPRRY---------APESLDHPEDRQPLALEVWQSVRK 506
P G GGF+DSDTLYGLAR LPRSPRRY AP D PE RQPLA+EVWQ++ K
Sbjct: 599 PRGCGGFLDSDTLYGLARDLPRSPRRYTAENSVTHGAPRDTDRPELRQPLAIEVWQNLTK 658
Query: 507 QLDPGEKITVLTNGPLTNMANISLSDRDASSVIERVYVVGGLIKDGGDENGNLFTVPSNK 566
+ KITVLTNGPLTN+A I SD+ +SS+I+ VY+VGG I + GN+FT+PSN
Sbjct: 659 SGNGVSKITVLTNGPLTNLAKIISSDKKSSSLIKEVYIVGGHINREKSDKGNIFTIPSNA 718
Query: 567 HAEFNIFLDPLAAKTVLESDLKIALIPLTAQRKAASFRAVLAALEDIQHTHESKFVHELL 626
+AEFN+FLDPLAAKTVLES L I L+PL Q K +SF+ +L L T E++FV LL
Sbjct: 719 YAEFNMFLDPLAAKTVLESALNITLVPLATQHKLSSFQTMLDRLYSSTKTPEARFVKRLL 778
Query: 627 SLLQELQIKQKLYHHLDIFLGEILGAVYM-VEGSGLKPSVELKPVSVIANTNKSTDGQIV 685
LQ L K + Y H+D+FLGE+LGAV + + + LKP + + + VIA ++S DG+I+
Sbjct: 779 VRLQALHQKHRRYTHIDMFLGEVLGAVLLGGDDASLKPKMRAEHIKVIAEGDESRDGKIL 838
Query: 686 ISKNSAKLVRVLSDFDGEIYSKQLANSLANKRQSAVIGSFEEQKAIWSRP 735
I K K +++L D S+ A+ L +K+QSAVIGSFEEQK IWS P
Sbjct: 839 IDKLRGKQIKILERVDLISISESFASRLDDKKQSAVIGSFEEQKKIWSTP 888
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 135/296 (45%), Gaps = 54/296 (18%)
Query: 387 SLIYLLKTPIEVIDLKAVLVNGNGWANIA-SIDIVYDILHMMGRDDIPVGLGNTTAL--- 442
+++YLLK DL + ++ N W N +++ VYD+LHMM RDDIPVG+G +
Sbjct: 47 AILYLLKLNKSEFDLVGITLSANAWTNAGHAVNQVYDLLHMMDRDDIPVGVGGEGGISDD 106
Query: 443 ----------------GIPTLG-CNNSYAIPHGSGGFIDSDTLYGLARS-LPRSPRRYAP 484
G+ T G C AIP G GG +D D+ YG + LP+ RRY P
Sbjct: 107 GTIHSDVGGYFPIIEQGMTTTGECRYRQAIPKGLGGLLDIDSNYGFRKQFLPQGNRRYTP 166
Query: 485 ESLDHPEDRQPLALEVWQSVRKQLDPGEKITVLTNGPLTNMANISLSDRDASSVIERVYV 544
+QP A +V + ++ G TV+ G TN A +S+ I+ +Y+
Sbjct: 167 L-------QQPTAQKV---IVDKISEG-PTTVILLGSHTNFALFLMSNPHLKHNIQHIYI 215
Query: 545 VGGLIKDGG-------------------DENGNLFT-VPSNKHAEFNIFLDPLAAKTVLE 584
+GG ++ GNLFT SN ++EFNIF DP AA V
Sbjct: 216 MGGGVRSQNPTGCCPANSTVAECQPRQCGNRGNLFTDYTSNPYSEFNIFADPFAAYQVFH 275
Query: 585 SDLKIALIPLTAQRKAASFRAVLAALE-DIQHTHESKFVHELLSLLQELQIKQKLY 639
S + + L+PL A + E + Q T+E+++V L + ++ + Y
Sbjct: 276 SGVPVTLVPLDATNTIPINQKFFETFENNYQRTYEAQYVFLSLKIARDTWFDDEFY 331
>AT5G18890.1 | chr5:6301652-6304088 FORWARD LENGTH=551
Length = 550
Score = 591 bits (1523), Expect = e-169, Method: Compositional matrix adjust.
Identities = 303/528 (57%), Positives = 381/528 (72%), Gaps = 19/528 (3%)
Query: 224 GENEFSELEYMNITVITSNKPYGKRDGSNPFFDGRATPKLGLKEGGVHSGHVQTGIRDSF 283
G+N+F+E+EYMNITV+TSN+PYG D SNPFF R TPK L GGVHSGHVQ G+RD
Sbjct: 14 GQNDFAEMEYMNITVVTSNEPYGLFDSSNPFFYKRRTPKFNLTLGGVHSGHVQRGLRDPI 73
Query: 284 CLVPGSNRGRCEDGYTREVSGPEGVRVRVATRAKPNTDKNSSLEKEFSKSFLEVLNRPEQ 343
C + S +G C DGYT+E SGP+ VRV VATRAKP+ + NS L++EF FLEVLNRPE+
Sbjct: 74 C-ISTSGKGNCRDGYTKETSGPDSVRVLVATRAKPSKNLNSELDREFYDHFLEVLNRPEE 132
Query: 344 TGLFNINTQFPYYREVLYKPVFRNVSR--GKPVIFDMDMSPGDFVSLIYLLKTPIEVIDL 401
TG F+ +TQF YYRE L+ N SR GKPV+FDMDMS GDF+SL YLLK P+E+IDL
Sbjct: 133 TGRFHFSTQFLYYREELFIAELNN-SRLGGKPVVFDMDMSAGDFLSLFYLLKVPVEIIDL 191
Query: 402 KAVLVNGNGWANIASIDIVYDILHMMGRDDIPVGLGNTTALG-----IPTLG-CNNSYAI 455
KAV+V+ GWAN A+ID+VYD+LHMMGRDDIPVGLG+ A+ P+ G C + A+
Sbjct: 192 KAVIVSPTGWANTATIDVVYDLLHMMGRDDIPVGLGDMFAINQSEPVFPSAGDCKYAKAV 251
Query: 456 PHGSGGFIDSDTLYGLARSLPRSPRRY-------APESLDHPEDRQPLALEVWQSVRKQL 508
P G GGF+DSDTLYGLAR LPRSPRRY AP D PE RQPLALEVWQ++ K +
Sbjct: 252 PQGCGGFLDSDTLYGLARDLPRSPRRYENSVAHGAPSDTDRPELRQPLALEVWQNLTKSV 311
Query: 509 DPGEKITVLTNGPLTNMANISLSDRDASSVIERVYVVGGLIKDGGDENGNLFTVPSNKHA 568
D KITVLTNGPLT++A I SD+++SS+I+ VY+VGG I G + GN+FTVPSN +A
Sbjct: 312 DEVSKITVLTNGPLTSLAKIISSDKNSSSIIKEVYIVGGHISRGKSDKGNIFTVPSNSYA 371
Query: 569 EFNIFLDPLAAKTVLESDLKIALIPLTAQRKAASFRAVLAALEDIQHTHESKFVHELLSL 628
EFN+FLDPLAAKTVLES L I LIPL QR+ SF+A+L L T E++FV LL+
Sbjct: 372 EFNMFLDPLAAKTVLESGLNITLIPLATQRE-FSFQAMLNRLYSSTKTPEARFVKRLLTR 430
Query: 629 LQELQIKQKLYHHLDIFLGEILGAVYM-VEGSGLKPSVELKPVSVIANTNKSTDGQIVIS 687
LQ L KQ+ Y H+D+FLGEILGA+++ + + LKP + + + VIA ++S DG I+I
Sbjct: 431 LQALHQKQRRYMHMDMFLGEILGAIFLGGDHALLKPKMRTEYIKVIAEGDESKDGHILID 490
Query: 688 KNSAKLVRVLSDFDGEIYSKQLANSLANKRQSAVIGSFEEQKAIWSRP 735
K K +++L D + A+ L +K+QSAVIGSFEEQ+ W+ P
Sbjct: 491 KLRGKQIKILERVDLRGCYESFASRLDDKKQSAVIGSFEEQRMKWNTP 538
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 100/200 (50%), Gaps = 26/200 (13%)
Query: 12 TAGGCRYRQAVPAGRGGRLDVDTNSGVRRGFLPQGRRRY-------------RP-VTQPT 57
+AG C+Y +AVP G GG LD DT G+ R LP+ RRY RP + QP
Sbjct: 241 SAGDCKYAKAVPQGCGGFLDSDTLYGLARD-LPRSPRRYENSVAHGAPSDTDRPELRQPL 299
Query: 58 AQRVMADTVSG----GPTTVLLFGAHTNLALLLMAHPRLARNIDRVYVSGGAV-RAADPA 112
A V + TVL G T+LA ++ + + I VY+ GG + R
Sbjct: 300 ALEVWQNLTKSVDEVSKITVLTNGPLTSLAKIISSDKNSSSIIKEVYIVGGHISRGKSDK 359
Query: 113 GNLFTAFATNPFAEFNIFGDPFAAYQVIHSGIPITMIPLDATNTISVTEEFVSEFQQHQQ 172
GN+FT +N +AEFN+F DP AA V+ SG+ IT+IPL S + ++ +
Sbjct: 360 GNIFTV-PSNSYAEFNMFLDPLAAKTVLESGLNITLIPLATQREFSF-QAMLNRLYSSTK 417
Query: 173 TYEAQYCFQSLDKVLMRLRG 192
T EA++ + ++L RL+
Sbjct: 418 TPEARF----VKRLLTRLQA 433
>AT5G18870.1 | chr5:6298386-6300289 FORWARD LENGTH=259
Length = 258
Score = 172 bits (435), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 78/135 (57%), Positives = 101/135 (74%), Gaps = 5/135 (3%)
Query: 8 QGTSTAGGCRYRQAVPAGRGGRLDVDTNSGVRRGFLPQGRRRYRPVTQPTAQRVMADTVS 67
QG +TAGGCRYRQ++P GR + +D+N G R+ FLPQG RRY P+ QPTAQ+V+ D VS
Sbjct: 119 QGMTTAGGCRYRQSIPKGRIQK--IDSNYGFRKHFLPQGNRRYTPLEQPTAQKVIVDKVS 176
Query: 68 GGPTTVLLFGAHTNLALLLMAHPRLARNIDRVYVSGGAVRAADP---AGNLFTAFATNPF 124
GP ++ + G+HTNLAL +M++P L NI +YV GG+VR +P GNLFT + +NP+
Sbjct: 177 EGPISIFVIGSHTNLALFMMSNPHLKHNIQHIYVMGGSVRCQNPNGFCGNLFTDYTSNPY 236
Query: 125 AEFNIFGDPFAAYQV 139
AEFNIF DPFAAYQV
Sbjct: 237 AEFNIFTDPFAAYQV 251
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 110/225 (48%), Gaps = 38/225 (16%)
Query: 385 FVSLIYLLKTPIEVIDLKAVLVNGNGWANIA-SIDIVYDILHMMGRDDIPVGLGNTTAL- 442
F++L+YLLK DL + ++ N W N ++ +YDIL+MMGRDDI VG+G +
Sbjct: 42 FIALLYLLKLNKTEFDLVGITLSANSWTNAGHGVNHIYDILYMMGRDDITVGVGGEGGIL 101
Query: 443 ------------------GIPTL-GCNNSYAIPHGSGGFIDSDTLYGLARS-LPRSPRRY 482
G+ T GC +IP G IDS+ YG + LP+ RRY
Sbjct: 102 EDGTILPDVGDYLPIIEQGMTTAGGCRYRQSIPKGRIQKIDSN--YGFRKHFLPQGNRRY 159
Query: 483 APESLDHPEDRQPLALEVWQSVRKQLDPGEKITVLTNGPLTNMANISLSDRDASSVIERV 542
P L+ P ++ + +V + I++ G TN+A +S+ I+ +
Sbjct: 160 TP--LEQPTAQKVIVDKVSEG---------PISIFVIGSHTNLALFMMSNPHLKHNIQHI 208
Query: 543 YVVGGLIK--DGGDENGNLFT-VPSNKHAEFNIFLDPLAAKTVLE 584
YV+GG ++ + GNLFT SN +AEFNIF DP AA V
Sbjct: 209 YVMGGSVRCQNPNGFCGNLFTDYTSNPYAEFNIFTDPFAAYQVFR 253
>AT2G36310.1 | chr2:15224692-15226633 REVERSE LENGTH=337
Length = 336
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 120/277 (43%), Gaps = 51/277 (18%)
Query: 368 VSRGKPVIFDMDMSPGDFVSLIYLLKTP-IEVIDLKAVLVNGNGWANIASIDIVYDIL-- 424
+ + + +I D D D ++++ +TP +E++ L V + N+++ D + L
Sbjct: 18 LGKHEKLIIDTDPGIDDSMAILMAFQTPELEILGLTTV------FGNVSTQDATRNALLL 71
Query: 425 -HMMGRDDIPVGLGNTTAL--GIPTLGCNNSYAIPHGSGGFIDSDTLYGLARSLPRSPRR 481
+ G D+PV G++ L GIP + HG G D SLP R+
Sbjct: 72 CEIAGFPDVPVAEGSSEPLKGGIPRVA-----DFVHGKNGLGDV--------SLPPPSRK 118
Query: 482 YAPESLDHPEDRQPLALEVWQSVRKQLDPGEKITVLTNGPLTNMANISLSDRDASSVIER 541
+ +S D + + PGE +T+L GPLTN+A D +S +++
Sbjct: 119 KSEKSAAEFLDE-----------KVEEYPGE-VTILALGPLTNLALAIKRDSSFASKVKK 166
Query: 542 VYVVGGLIKDGGDENGNLFTVPSNKHAEFNIFLDPLAAKTVLES--DLKIALIPLTAQRK 599
+ ++GG G+ N AE NI+ DP AA V S D+ + I +T Q K
Sbjct: 167 IVILGGAFFSLGN---------VNPAAEANIYGDPEAADVVFTSGADITVVGINITTQLK 217
Query: 600 AASFRAVLAALEDIQHTHESKFVHELLSLLQELQIKQ 636
+ L L + + H SK + ++ ++ +K
Sbjct: 218 LSDDD--LLELGNCKGKH-SKLISDMCKFYRDWHVKS 251
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 50/99 (50%), Gaps = 9/99 (9%)
Query: 69 GPTTVLLFGAHTNLALLLMAHPRLARNIDRVYVSGGAVRAADPAGNLFTAFATNPFAEFN 128
G T+L G TNLAL + A + ++ + GGA F+ NP AE N
Sbjct: 137 GEVTILALGPLTNLALAIKRDSSFASKVKKIVILGGA---------FFSLGNVNPAAEAN 187
Query: 129 IFGDPFAAYQVIHSGIPITMIPLDATNTISVTEEFVSEF 167
I+GDP AA V SG IT++ ++ T + ++++ + E
Sbjct: 188 IYGDPEAADVVFTSGADITVVGINITTQLKLSDDDLLEL 226
>AT1G05620.1 | chr1:1679286-1681527 FORWARD LENGTH=323
Length = 322
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 57/116 (49%), Gaps = 10/116 (8%)
Query: 69 GPTTVLLFGAHTNLALLLMAHPRLARNIDRVYVSGGAVRAADPAGNLFTAFATNPFAEFN 128
G TV+ G TNLAL + P ++N+ ++ + GGA GN+ NP +E N
Sbjct: 123 GEITVVALGPLTNLALAVQLDPEFSKNVGQIVLLGGAFAVN---GNV------NPASEAN 173
Query: 129 IFGDPFAAYQVIHSGIPITMIPLDATNTISVTEEFVSEFQQHQQTYEAQYCFQSLD 184
IFGDP AA V G I + ++ T+ + +T + + + AQY + LD
Sbjct: 174 IFGDPEAADIVFTCGADIIAVGINVTHQVIMTADDKDKLASSKGKL-AQYLCKILD 228
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.135 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 16,547,804
Number of extensions: 741131
Number of successful extensions: 1664
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 1636
Number of HSP's successfully gapped: 9
Length of query: 746
Length of database: 11,106,569
Length adjustment: 106
Effective length of query: 640
Effective length of database: 8,200,473
Effective search space: 5248302720
Effective search space used: 5248302720
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 115 (48.9 bits)