BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0399700 Os05g0399700|AK071196
(340 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G12500.1 | chr3:3962501-3963984 REVERSE LENGTH=336 273 7e-74
AT4G01700.1 | chr4:732413-733487 REVERSE LENGTH=281 175 3e-44
AT1G02360.1 | chr1:472138-473116 REVERSE LENGTH=273 167 1e-41
AT3G54420.1 | chr3:20145935-20147034 FORWARD LENGTH=274 114 7e-26
AT2G43590.1 | chr2:18081592-18082749 REVERSE LENGTH=265 113 2e-25
AT3G16920.1 | chr3:5776663-5777886 REVERSE LENGTH=349 113 2e-25
AT1G05850.1 | chr1:1766833-1768117 REVERSE LENGTH=322 111 6e-25
AT2G43610.1 | chr2:18088058-18089184 REVERSE LENGTH=282 110 1e-24
AT2G43620.1 | chr2:18093954-18095025 REVERSE LENGTH=284 107 1e-23
AT2G43570.1 | chr2:18076389-18077435 REVERSE LENGTH=278 105 4e-23
AT2G43580.1 | chr2:18078817-18080013 REVERSE LENGTH=266 103 2e-22
AT2G43600.1 | chr2:18086049-18087018 REVERSE LENGTH=274 91 1e-18
AT1G56680.1 | chr1:21250428-21251417 REVERSE LENGTH=281 77 2e-14
>AT3G12500.1 | chr3:3962501-3963984 REVERSE LENGTH=336
Length = 335
Score = 273 bits (699), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 147/315 (46%), Positives = 181/315 (57%), Gaps = 24/315 (7%)
Query: 33 EQCGRQAGGARCPNRLCCSRWGWCGLTDDYCKG-GCQSQCRVSRDGGDDDVAAVLLTAPG 91
EQCGRQAGGA CPN LCCS +GWCG T+ YCK GCQSQC P
Sbjct: 34 EQCGRQAGGALCPNGLCCSEFGWCGNTEPYCKQPGCQSQCTPG-------------GTPP 80
Query: 92 GGRAGVASVVTSDQFERMLPHRDDAACPXXXXXXXXXXXXXXXXXXXXXXTGDADTRKRE 151
G ++ +++S QF+ ML HR+DAACP TGD TRK+E
Sbjct: 81 GPTGDLSGIISSSQFDDMLKHRNDAACPARGFYTYNAFITAAKSFPGFGTTGDTATRKKE 140
Query: 152 VAAFLAQTSHATSGG-------PYSWGYCYKEVKGATSDFCVPNARWPCAPGKAYHARGP 204
VAAF QTSH T+GG PYSWGYC+K+ + SD+C P+A WPCA GK Y+ RGP
Sbjct: 141 VAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPASDYCEPSATWPCASGKRYYGRGP 200
Query: 205 MQXXXXXXXXXXXXXXXXDLLGNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQ 264
MQ DLL NP+LVA D +AFK A+W WMTA+ P +PS HAV+ GQ
Sbjct: 201 MQLSWNYNYGLCGRAIGVDLLNNPDLVANDAVIAFKAAIWFWMTAQ-PPKPSCHAVIAGQ 259
Query: 265 WTPTPADSAAGRAPGYGLTTNILTXXXX--XXXXXXXADRVAFYKRYCDVLGVGYGPNLD 322
W P+ AD AAGR PGYG+ TNI+ ADR+ FY+RYC++ GV G NLD
Sbjct: 260 WQPSDADRAAGRLPGYGVITNIINGGLECGRGQDGRVADRIGFYQRYCNIFGVNPGGNLD 319
Query: 323 CFGQAPFDGDIMSAS 337
C+ Q F ++ A+
Sbjct: 320 CYNQRSFVNGLLEAA 334
>AT4G01700.1 | chr4:732413-733487 REVERSE LENGTH=281
Length = 280
Score = 175 bits (443), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 97/245 (39%), Positives = 127/245 (51%), Gaps = 11/245 (4%)
Query: 95 AGVASVVTSDQFERMLPHRDDAACPXXXXXXXXXXXXXXXXXXXXXXTGDADTRKREVAA 154
A + S+V ++++ H+D+ ACP G+ TR+REVAA
Sbjct: 36 APIMSLVPRTLYDQIFIHKDNNACPAKGFYPYEAFVEATRSFPKFGSVGNFWTRRREVAA 95
Query: 155 FLAQTSHATSGG-------PYSWGYCYKEVKGATSDFC-VPNARWPCAPGKAYHARGPMQ 206
FLAQ SH T+GG PY+WG C+KE S++C N WPC GK+Y RGP+Q
Sbjct: 96 FLAQISHETTGGWATAPDGPYAWGLCFKEEVSPQSNYCDASNKDWPCVSGKSYKGRGPIQ 155
Query: 207 XXXXXXXXXXXXXXXXDLLGNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQWT 266
D L NPELVA + +AFKTALW WMT ++P +PS H V+ ++
Sbjct: 156 LSWNYNYGQAGRALGFDGLQNPELVANNSVLAFKTALWFWMTEQTP-KPSCHNVMVNRYR 214
Query: 267 PTPADSAAGRAPGYGLTTNILTXXXX--XXXXXXXADRVAFYKRYCDVLGVGYGPNLDCF 324
PT AD AA R GYGL TNI+ DRV +++RY + V GPNLDC
Sbjct: 215 PTKADRAANRTVGYGLVTNIINGGLECGIPGDGRVTDRVGYFQRYAQLFKVTTGPNLDCE 274
Query: 325 GQAPF 329
Q PF
Sbjct: 275 NQRPF 279
>AT1G02360.1 | chr1:472138-473116 REVERSE LENGTH=273
Length = 272
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 93/256 (36%), Positives = 128/256 (50%), Gaps = 11/256 (4%)
Query: 84 AVLLTAPGGGRAGVASVVTSDQFERMLPHRDDAACPXXXXXXXXXXXXXXXXXXXXXXTG 143
+ LL++ + +V D + ++ H+D+ ACP G
Sbjct: 17 SYLLSSAQTEATSIERLVPRDLYNKIFIHKDNTACPANGFYTYESFVQATRRFPRFGSVG 76
Query: 144 DADTRKREVAAFLAQTSHATSGG-------PYSWGYCYKEVKGATSDFC-VPNARWPCAP 195
T++ EVAAFLAQ SH T+GG PY+WG C+KE S +C + +WPC P
Sbjct: 77 SPVTQRLEVAAFLAQISHETTGGWATAPDGPYAWGLCFKEEVSPQSTYCDSSDTQWPCFP 136
Query: 196 GKAYHARGPMQXXXXXXXXXXXXXXXXDLLGNPELVATDPTVAFKTALWLWMTARSPSQP 255
K Y RGP+Q D L NPE V+ + +AF+TALW WMT +SP +P
Sbjct: 137 NKTYQGRGPIQLSWNYNYGPAGRALGFDGLRNPETVSNNSVIAFQTALWFWMTPQSP-KP 195
Query: 256 SPHAVVTGQWTPTPADSAAGRAPGYGLTTNILTXXXX--XXXXXXXADRVAFYKRYCDVL 313
S H V+ G++ PT AD AA R G+GLTTNI+ DR+ F++RY +
Sbjct: 196 SCHDVMIGKYRPTAADLAANRTGGFGLTTNIINGGLECGIPGDGRVNDRIGFFQRYTGLF 255
Query: 314 GVGYGPNLDCFGQAPF 329
V GPNLDC Q P+
Sbjct: 256 KVATGPNLDCENQRPY 271
>AT3G54420.1 | chr3:20145935-20147034 FORWARD LENGTH=274
Length = 273
Score = 114 bits (285), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 112/284 (39%), Gaps = 47/284 (16%)
Query: 44 CPNRLCCSRWGWCGLTDDYCKGGCQSQCRVSRDGGDDDVAAVLLTAPGGGRAGVASVVTS 103
C + LCCS++G+CG T DYC GCQ P VA +VT
Sbjct: 33 CSSELCCSQFGFCGNTSDYCGVGCQQ--------------GPCFAPPPANGVSVAEIVTQ 78
Query: 104 DQFERMLPHRDDAACPXXXXXXXXXXXXXXXXXXXXXXTGDADTRKREVAAFLAQTSHAT 163
+ F ++ + ++C G D +RE+AAF A +H T
Sbjct: 79 EFFNGII-SQAASSCAGNRFYSRGAFLEALDSYSRFGRVGSTDDSRREIAAFFAHVTHET 137
Query: 164 SGGPYSWGYCY-KEVKGATSDFCVPNA-RWPCAPGKAYHARGPMQXXXXXXXXXXXXXXX 221
+CY +E+ GA+ D+C NA ++PC P K Y+ RGP+Q
Sbjct: 138 G------HFCYIEEIDGASKDYCDENATQYPCNPNKGYYGRGPIQLSWNFNYGPAGTAIG 191
Query: 222 XDLLGNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQWTPTPADSAAGRAPGYG 281
D L PE VATDP ++FKTALW W P V Q G+G
Sbjct: 192 FDGLNAPETVATDPVISFKTALWYWTNRVQP--------VISQ--------------GFG 229
Query: 282 LTTNILTXXXX--XXXXXXXADRVAFYKRYCDVLGVGYGPNLDC 323
T + RV +Y YC LGV G NL C
Sbjct: 230 ATIRAINGALECDGANTATVQARVRYYTDYCRQLGVDPGNNLTC 273
>AT2G43590.1 | chr2:18081592-18082749 REVERSE LENGTH=265
Length = 264
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 117/284 (41%), Gaps = 52/284 (18%)
Query: 44 CPNRLCCSRWGWCGLTDDYCKGGCQSQ-CRVSRDGGDDDVAAVLLTAPGGGRAGVASVVT 102
C LCCS++G+CG D YC GC+S CR S P GG G S+VT
Sbjct: 29 CAPNLCCSQFGYCGTDDAYCGVGCRSGPCRGS-------------GTPTGGSVG--SIVT 73
Query: 103 SDQFERMLPHRDDAACPXXXXXXXXXXXXXXXXXXXXXXTGDADTRKREVAAFLAQTSHA 162
F ++ + ++ TR RE+A A +H
Sbjct: 74 QGFFNNIINQAGNGC----AGKRFYTRDSFVNAANTFPNFANSVTR-REIATMFAHFTHE 128
Query: 163 TSGGPYSWGYCY-KEVKGATSDFC-VPNARWPCAPGKAYHARGPMQXXXXXXXXXXXXXX 220
T +CY +E+ GAT ++C N ++PCAPGK Y RGP+Q
Sbjct: 129 TGH------FCYIEEINGATRNYCQSSNTQYPCAPGKGYFGRGPIQLSWNYNYGACGQSL 182
Query: 221 XXDLLGNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQWTPTPADSAAGRAPGY 280
DLL PELV ++PTVAF+T LW WM + P V Q G+
Sbjct: 183 GLDLLRQPELVGSNPTVAFRTGLWFWMNSVRP--------VLNQ--------------GF 220
Query: 281 GLTTNILTXXXXXXXXXXXAD-RVAFYKRYCDVLGVGYGPNLDC 323
G T + + R+ +Y+ YC LGV GPNL C
Sbjct: 221 GATIRAINGMECNGGNSGAVNARIGYYRDYCGQLGVDPGPNLSC 264
>AT3G16920.1 | chr3:5776663-5777886 REVERSE LENGTH=349
Length = 348
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 91/197 (46%), Gaps = 17/197 (8%)
Query: 150 REVAAFLAQTSHATS-------GGPYSWGYCYKEVKGATSDFC--VPNARWPCAPGKAYH 200
+EVAAFL TS GGP +WG CY + +C +PC PG +YH
Sbjct: 138 KEVAAFLGHVGSKTSCGYGVATGGPLAWGLCYNKEMSPDQLYCDDYYKLTYPCTPGVSYH 197
Query: 201 ARGPMQXXXXXXXXXXXXXXXXDLLGNPELVATDPTVAFKTALWLWMTARSPSQPSPHAV 260
RG + DLL +PE + + T+AF+ A+W WMT PS H V
Sbjct: 198 GRGALPVYWNYNYGQTGEALKVDLLSHPEYLENNATLAFQAAIWRWMTPPKKHLPSAHDV 257
Query: 261 VTGQWTPTPADSAAGRAPGYGLTTNIL---TXXXXXXXXXXXADRVAFYKRYCDVLGVGY 317
G+W PT D+AA R PG+G T N+L + V+ Y Y D++GVG
Sbjct: 258 FVGKWKPTKNDTAAKRTPGFGATINVLYGDQICNSGFDNDEMNNIVSHYLYYLDLIGVGR 317
Query: 318 ---GPN--LDCFGQAPF 329
GP+ L C Q PF
Sbjct: 318 EEAGPHEKLSCADQEPF 334
>AT1G05850.1 | chr1:1766833-1768117 REVERSE LENGTH=322
Length = 321
Score = 111 bits (277), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 96/205 (46%), Gaps = 16/205 (7%)
Query: 142 TGDADTRKREVAAFLAQTSHATS-------GGPYSWGYCYKEVKGATSDFCVPN--ARWP 192
TG ++E+AAFL + TS GGP +WG CY +C + ++P
Sbjct: 107 TGGKLMGQKEMAAFLGHVASKTSCGYGVATGGPLAWGLCYNREMSPMQSYCDESWKFKYP 166
Query: 193 CAPGKAYHARGPMQXXXXXXXXXXXXXXXXDLLGNPELVATDPTVAFKTALWLWMTARSP 252
C+PG Y+ RG + DLL +PE + + T+AF+ A+W WMT
Sbjct: 167 CSPGAEYYGRGALPIYWNFNYGAAGEALKADLLNHPEYIEQNATLAFQAAIWRWMTPIKR 226
Query: 253 SQPSPHAVVTGQWTPTPADSAAGRAPGYGLTTNILTXXXX--XXXXXXXADRVAFYKRYC 310
+QPS H + G W PT D+ + R P +G T N+L + ++ Y +
Sbjct: 227 AQPSAHDIFVGNWKPTKNDTLSKRGPTFGSTMNVLYGEYTCGQGSIDPMNNIISHYLYFL 286
Query: 311 DVLGVGY---GPN--LDCFGQAPFD 330
D++G+G GPN L C Q PF+
Sbjct: 287 DLMGIGREDAGPNDELSCAEQKPFN 311
>AT2G43610.1 | chr2:18088058-18089184 REVERSE LENGTH=282
Length = 281
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 113/282 (40%), Gaps = 38/282 (13%)
Query: 44 CPNRLCCSRWGWCGLTDDYCKGGCQS-QCRVSRDGGDDDVAAVLLTAPGGGRAGVASVVT 102
C +CCSRWG+CG T YC GCQS C + L A G R +ASV+T
Sbjct: 36 CKGNMCCSRWGYCGTTKAYCGTGCQSGPCNSKPKPTPTPSGSGGLNA--GPRGTIASVIT 93
Query: 103 SDQFERMLPHRDDAACPXXXXXXXXXXXXXXXXXXXXXXTGDADTRKREVAAFLAQTSHA 162
F ++ + + CP T KRE+AA LAQ SH
Sbjct: 94 PAFFNSIM-SKVGSGCPAKGFYTRQAFIAAAESFAAYKGT----VAKREIAAMLAQFSHE 148
Query: 163 TSGGPYSWGYCYKEVKGATSDFCVPNARWPCAPGKAYHARGPMQXXXXXXXXXXXXXXXX 222
S +CYKE + A +C P+ +PC PGK Y+ RGP+Q
Sbjct: 149 ------SGSFCYKE-EIARGRYCSPSTTYPCQPGKNYYGRGPIQITWNYNYGAAGKFLGL 201
Query: 223 DLLGNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQWTPTPADSAAGRAPGYGL 282
LL +P++VA PTVAF+ A+W W P V Q G+G
Sbjct: 202 PLLKDPDMVARSPTVAFQCAMWFWNKNVRP--------VLSQ--------------GFGA 239
Query: 283 TTNILTXXX-XXXXXXXXADRVAFYKRYCDVLGVGYGPNLDC 323
TT + RV Y +C LGV G NL C
Sbjct: 240 TTRRINGGECNGGRPAAVQSRVNHYLDFCKKLGVTPGTNLSC 281
>AT2G43620.1 | chr2:18093954-18095025 REVERSE LENGTH=284
Length = 283
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 112/295 (37%), Gaps = 48/295 (16%)
Query: 37 RQAGGARCPNRLCCSRWGWCGLTDDYCKGGCQSQCRVSRDGGDDDVAAVLLTAPGGGRAG 96
+Q G C LCCSR+G+CG TD YC GC R G + P GG G
Sbjct: 29 QQCGTTGCAANLCCSRYGYCGTTDAYCGTGC-------RSGPCSSSTTPIPPTPSGGAGG 81
Query: 97 --------VASVVTSDQFERMLPHRDDAACPXXXXXXXXXXXXXXXXXXXXXXTGDADTR 148
+ +VVT F+ ++ + CP T
Sbjct: 82 LNADPRDTIENVVTPAFFDGIMSKVGN-GCPAKGFYTRQAFIAAAQSFDAYKGT----VA 136
Query: 149 KREVAAFLAQTSHATSGGPYSWGYCYKEVKGATSDFCVPNARWPCAPGKAYHARGPMQXX 208
KRE+AA LAQ SH S +CYKE + A +C P+ +PC PGK Y+ RGP+Q
Sbjct: 137 KREIAAMLAQFSHE------SGSFCYKE-EIARGKYCSPSTAYPCTPGKDYYGRGPIQIT 189
Query: 209 XXXXXXXXXXXXXXDLLGNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQWTPT 268
LL +P++VA P VAF+ A+W W P T +
Sbjct: 190 WNYNYGAAGKFLGLPLLTDPDMVARSPQVAFQCAMWFWNLNVRPVLDQGFGATTRKIN-- 247
Query: 269 PADSAAGRAPGYGLTTNILTXXXXXXXXXXXADRVAFYKRYCDVLGVGYGPNLDC 323
GR P RV +Y +C LG+ G NL C
Sbjct: 248 -GGECNGRRPA------------------AVQSRVNYYLEFCRTLGITPGANLSC 283
>AT2G43570.1 | chr2:18076389-18077435 REVERSE LENGTH=278
Length = 277
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 114/290 (39%), Gaps = 58/290 (20%)
Query: 44 CPNRLCCSRWGWCGLTDDYCKGGCQSQ-CRVSRDGGDDDVAAVLLTAPGGGRAGVASVVT 102
C + CCS++G+CG TD++C GCQ+ CR S GGD V+ + VT
Sbjct: 36 CASDFCCSKYGYCGTTDEFCGEGCQAGPCRSSGGGGDPAVS-------------LEGTVT 82
Query: 103 SDQFERMLPHRDDAACPXXXXXXXXXXXXXXXXXXXXXXTGDADTRKREVAAFLAQTSHA 162
D F +L R D CP A KRE+AAF A +
Sbjct: 83 PDFFNSILNQRGD--CPGKGFYTHDTFMAAANSYPSFG----ASISKREIAAFFAHVAQE 136
Query: 163 TSGGPYSWGY-CYKE-----VKGATSDFC-VPNARWPCAPGKAYHARGPMQXXXXXXXXX 215
T G+ CY E K A+ ++C +PCA GK Y+ RG +Q
Sbjct: 137 T-------GFMCYIEEIDGPAKAASGEYCDTEKPEFPCAQGKGYYGRGAIQLSWNYNYGL 189
Query: 216 XXXXXXXDLLGNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQWTPTPADSAAG 275
+LL +PE VA D +AFKTA W W T S S
Sbjct: 190 CGKALDENLLASPEKVAQDQVLAFKTAFWFWTTNVRTSFKS------------------- 230
Query: 276 RAPGYGLTTNILTXXXXXX--XXXXXADRVAFYKRYCDVLGVGYGPNLDC 323
G+G T + A+R+ +++ YC LGV G NL C
Sbjct: 231 ---GFGATIRAVNSRECSGGDSTAKAANRIKYFQDYCGKLGVAPGDNLTC 277
>AT2G43580.1 | chr2:18078817-18080013 REVERSE LENGTH=266
Length = 265
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 114/284 (40%), Gaps = 51/284 (17%)
Query: 44 CPNRLCCSRWGWCGLTDDYCKGGCQSQ-CRVSRDGGDDDVAAVLLTAPGGGRAGVASVVT 102
C LCCS++G+CG T DYC CQS CRV P G V ++VT
Sbjct: 29 CAPNLCCSQFGYCGTTADYCGSTCQSGPCRVG--------------GPPTGAGLVGNIVT 74
Query: 103 SDQFERMLPHRDDAACPXXXXXXXXXXXXXXXXXXXXXXTGDADTRKREVAAFLAQTSHA 162
F ++ + C T +RE+A A ++
Sbjct: 75 QIFFNNIINQAGNG-CAGKSFYTRDSFINATNTFPSFANT----VTRREIATMFAHFTYE 129
Query: 163 TSGGPYSWGYCY-KEVKGATSDFCVPNAR-WPCAPGKAYHARGPMQXXXXXXXXXXXXXX 220
T +CY +E+ GA+ C N R +PCAP K+YH RGP+
Sbjct: 130 TGH------FCYIEEINGASRVMCDQNNRQYPCAPAKSYHGRGPLLLSWNFNYGACGQSL 183
Query: 221 XXDLLGNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQWTPTPADSAAGRAPGY 280
DLL PELV+++P VAF+TALW WM + P V Q G+
Sbjct: 184 GLDLLRQPELVSSNPVVAFRTALWFWMKSVRP--------VLNQ--------------GF 221
Query: 281 GLTTNILTXXXXXXXXXXXAD-RVAFYKRYCDVLGVGYGPNLDC 323
G T ++ + R+ +Y+ YC LG+ G N+ C
Sbjct: 222 GATIRAISGFDCDGRNLGGVNARIGYYRDYCGQLGLDPGANITC 265
>AT2G43600.1 | chr2:18086049-18087018 REVERSE LENGTH=274
Length = 273
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 113/284 (39%), Gaps = 44/284 (15%)
Query: 44 CPN-RLCCSRWGWCGLTDDYCKGGCQS---QCRVSRDGGDDDVAAVLLTAPGGGRAGVAS 99
CP + CCSRWG+CG D+YC C S + G D +V A G R + +
Sbjct: 30 CPGLKECCSRWGFCGTKDEYCGFFCFSGPCNIKGKSYGYDYNVDA-------GPRGKIET 82
Query: 100 VVTSDQFERMLPHRDDAACPXXXXXXXXXXXXXXXXXXXXXXTGDADTRKREVAAFLAQT 159
V+TS F+ ++ + ++ C KRE+AA LA
Sbjct: 83 VITSALFDSIMS-KVESNCSAKGFYTYEAFITAFKSFGAY----KGKVAKREIAAILAHF 137
Query: 160 SHATSGGPYSWGYCYKEVKGATSDFCVPNARWPCAPGKAYHARGPMQXXXXXXXXXXXXX 219
S+ + +CYKE + + +C + ++PC PGK Y+ RG +Q
Sbjct: 138 SYGSKS------FCYKE-EISNERYCSKSKKYPCEPGKNYYGRGLLQSITWNEYYGAGKH 190
Query: 220 XXXDLLGNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQWTPTPADSAAGRAPG 279
LL +P+LV+ P VAFK A+W W P+ +T + GR G
Sbjct: 191 LGLPLLKDPDLVSRSPEVAFKFAMWFWNRNVRPALYLGFGEITKR--------VDGRECG 242
Query: 280 YGLTTNILTXXXXXXXXXXXADRVAFYKRYCDVLGVGYGPNLDC 323
++V Y +C++LGV LDC
Sbjct: 243 -------------NWRRDDTKNKVKQYIEFCEMLGVTPDQGLDC 273
>AT1G56680.1 | chr1:21250428-21251417 REVERSE LENGTH=281
Length = 280
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 86/207 (41%), Gaps = 21/207 (10%)
Query: 49 CCSRWGWCGLTDDYCKGGCQSQ-CRVSRDGGDDDVAAVLLTAPGGGRAGVASVVTSDQFE 107
CCS G+CG ++C C S C++S+ + G R + S+VT F
Sbjct: 42 CCSHTGYCGTNVEHCGFWCLSGPCQLSKSSSSYRL-------NDGPRGKIESIVTPALFH 94
Query: 108 RMLPHRDDAACPXXXXXXXXXXXXXXXXXXXXXXTGDADTRKREVAAFLAQTSHATSGGP 167
R++ + + C T KRE+AA LAQ S+ +
Sbjct: 95 RLM-RKVGSNCTGKGFYTREAFITAVKSFEGYKGT----VAKREIAAILAQFSYESGN-- 147
Query: 168 YSWGYCYKEVKGATSDFCVPNARWPCAPGKAYHARGPMQXXX-XXXXXXXXXXXXXDLLG 226
+CYKE + + +C + +PC GK Y+ RG +Q LL
Sbjct: 148 ----FCYKE-EVTSETYCSSSKTYPCQSGKKYYGRGLLQSIKWNEFYGEAGKYLGLPLLK 202
Query: 227 NPELVATDPTVAFKTALWLWMTARSPS 253
+P++VA P VAFK A+W W T PS
Sbjct: 203 DPDMVARSPEVAFKFAMWFWKTEVGPS 229
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.134 0.449
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,433,160
Number of extensions: 235966
Number of successful extensions: 481
Number of sequences better than 1.0e-05: 14
Number of HSP's gapped: 437
Number of HSP's successfully gapped: 14
Length of query: 340
Length of database: 11,106,569
Length adjustment: 99
Effective length of query: 241
Effective length of database: 8,392,385
Effective search space: 2022564785
Effective search space used: 2022564785
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 112 (47.8 bits)