BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0399400 Os05g0399400|Os05g0399400
(334 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G12500.1 | chr3:3962501-3963984 REVERSE LENGTH=336 374 e-104
AT1G02360.1 | chr1:472138-473116 REVERSE LENGTH=273 295 2e-80
AT4G01700.1 | chr4:732413-733487 REVERSE LENGTH=281 288 3e-78
AT1G05850.1 | chr1:1766833-1768117 REVERSE LENGTH=322 167 8e-42
AT3G16920.1 | chr3:5776663-5777886 REVERSE LENGTH=349 160 9e-40
AT3G54420.1 | chr3:20145935-20147034 FORWARD LENGTH=274 151 5e-37
AT2G43610.1 | chr2:18088058-18089184 REVERSE LENGTH=282 144 7e-35
AT2G43620.1 | chr2:18093954-18095025 REVERSE LENGTH=284 143 1e-34
AT2G43590.1 | chr2:18081592-18082749 REVERSE LENGTH=265 136 1e-32
AT2G43570.1 | chr2:18076389-18077435 REVERSE LENGTH=278 129 2e-30
AT2G43580.1 | chr2:18078817-18080013 REVERSE LENGTH=266 119 3e-27
AT2G43600.1 | chr2:18086049-18087018 REVERSE LENGTH=274 107 1e-23
AT1G56680.1 | chr1:21250428-21251417 REVERSE LENGTH=281 105 5e-23
AT3G47540.2 | chr3:17521044-17522467 FORWARD LENGTH=284 67 2e-11
>AT3G12500.1 | chr3:3962501-3963984 REVERSE LENGTH=336
Length = 335
Score = 374 bits (960), Expect = e-104, Method: Compositional matrix adjust.
Identities = 184/310 (59%), Positives = 210/310 (67%), Gaps = 10/310 (3%)
Query: 24 EQCGSQAGGALCPNCLCCSSYGWCGSTSDYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 83
EQCG QAGGALCPN LCCS +GWCG+T Y
Sbjct: 34 EQCGRQAGGALCPNGLCCSEFGWCGNTEPYCKQPGCQSQCTPGGTPPGPTGD-------- 85
Query: 84 XAVEAVVSKELFEQLLLHRNDAACPARGFYTYXXXXXXXXXXXXXXXXXXXEARKREVAA 143
+ ++S F+ +L HRNDAACPARGFYTY RK+EVAA
Sbjct: 86 --LSGIISSSQFDDMLKHRNDAACPARGFYTYNAFITAAKSFPGFGTTGDTATRKKEVAA 143
Query: 144 FLGQTSHETTGGWATAPDGPYSWGYCFKEEIGATASYCVPSAEWPCAPDKKYFGRGPIQL 203
F GQTSHETTGGWATAPDGPYSWGYCFK+E + YC PSA WPCA K+Y+GRGP+QL
Sbjct: 144 FFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPASDYCEPSATWPCASGKRYYGRGPMQL 203
Query: 204 SYNYNYGPAGEAIGEDLLNNPELVASDPVVSFKTALWFWMTPQSPKPSCHDVITGQWTPS 263
S+NYNYG G AIG DLLNNP+LVA+D V++FK A+WFWMT Q PKPSCH VI GQW PS
Sbjct: 204 SWNYNYGLCGRAIGVDLLNNPDLVANDAVIAFKAAIWFWMTAQPPKPSCHAVIAGQWQPS 263
Query: 264 SGDIAAGRVPGYGVITNIINGGLECGFGPDDRVANRIGFYQRYCDVLGIGYGSNLDCYDQ 323
D AAGR+PGYGVITNIINGGLECG G D RVA+RIGFYQRYC++ G+ G NLDCY+Q
Sbjct: 264 DADRAAGRLPGYGVITNIINGGLECGRGQDGRVADRIGFYQRYCNIFGVNPGGNLDCYNQ 323
Query: 324 RPFNSGLTAA 333
R F +GL A
Sbjct: 324 RSFVNGLLEA 333
>AT1G02360.1 | chr1:472138-473116 REVERSE LENGTH=273
Length = 272
Score = 295 bits (756), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 134/243 (55%), Positives = 176/243 (72%), Gaps = 1/243 (0%)
Query: 85 AVEAVVSKELFEQLLLHRNDAACPARGFYTYXXXXXXXXXXXXXXXXXXXEARKREVAAF 144
++E +V ++L+ ++ +H+++ ACPA GFYTY ++ EVAAF
Sbjct: 29 SIERLVPRDLYNKIFIHKDNTACPANGFYTYESFVQATRRFPRFGSVGSPVTQRLEVAAF 88
Query: 145 LGQTSHETTGGWATAPDGPYSWGYCFKEEIGATASYCVPS-AEWPCAPDKKYFGRGPIQL 203
L Q SHETTGGWATAPDGPY+WG CFKEE+ ++YC S +WPC P+K Y GRGPIQL
Sbjct: 89 LAQISHETTGGWATAPDGPYAWGLCFKEEVSPQSTYCDSSDTQWPCFPNKTYQGRGPIQL 148
Query: 204 SYNYNYGPAGEAIGEDLLNNPELVASDPVVSFKTALWFWMTPQSPKPSCHDVITGQWTPS 263
S+NYNYGPAG A+G D L NPE V+++ V++F+TALWFWMTPQSPKPSCHDV+ G++ P+
Sbjct: 149 SWNYNYGPAGRALGFDGLRNPETVSNNSVIAFQTALWFWMTPQSPKPSCHDVMIGKYRPT 208
Query: 264 SGDIAAGRVPGYGVITNIINGGLECGFGPDDRVANRIGFYQRYCDVLGIGYGSNLDCYDQ 323
+ D+AA R G+G+ TNIINGGLECG D RV +RIGF+QRY + + G NLDC +Q
Sbjct: 209 AADLAANRTGGFGLTTNIINGGLECGIPGDGRVNDRIGFFQRYTGLFKVATGPNLDCENQ 268
Query: 324 RPF 326
RP+
Sbjct: 269 RPY 271
>AT4G01700.1 | chr4:732413-733487 REVERSE LENGTH=281
Length = 280
Score = 288 bits (737), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 132/243 (54%), Positives = 172/243 (70%), Gaps = 1/243 (0%)
Query: 86 VEAVVSKELFEQLLLHRNDAACPARGFYTYXXXXXXXXXXXXXXXXXXXEARKREVAAFL 145
+ ++V + L++Q+ +H+++ ACPA+GFY Y R+REVAAFL
Sbjct: 38 IMSLVPRTLYDQIFIHKDNNACPAKGFYPYEAFVEATRSFPKFGSVGNFWTRRREVAAFL 97
Query: 146 GQTSHETTGGWATAPDGPYSWGYCFKEEIGATASYCVPS-AEWPCAPDKKYFGRGPIQLS 204
Q SHETTGGWATAPDGPY+WG CFKEE+ ++YC S +WPC K Y GRGPIQLS
Sbjct: 98 AQISHETTGGWATAPDGPYAWGLCFKEEVSPQSNYCDASNKDWPCVSGKSYKGRGPIQLS 157
Query: 205 YNYNYGPAGEAIGEDLLNNPELVASDPVVSFKTALWFWMTPQSPKPSCHDVITGQWTPSS 264
+NYNYG AG A+G D L NPELVA++ V++FKTALWFWMT Q+PKPSCH+V+ ++ P+
Sbjct: 158 WNYNYGQAGRALGFDGLQNPELVANNSVLAFKTALWFWMTEQTPKPSCHNVMVNRYRPTK 217
Query: 265 GDIAAGRVPGYGVITNIINGGLECGFGPDDRVANRIGFYQRYCDVLGIGYGSNLDCYDQR 324
D AA R GYG++TNIINGGLECG D RV +R+G++QRY + + G NLDC +QR
Sbjct: 218 ADRAANRTVGYGLVTNIINGGLECGIPGDGRVTDRVGYFQRYAQLFKVTTGPNLDCENQR 277
Query: 325 PFN 327
PF+
Sbjct: 278 PFS 280
>AT1G05850.1 | chr1:1766833-1768117 REVERSE LENGTH=322
Length = 321
Score = 167 bits (423), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 87/243 (35%), Positives = 129/243 (53%), Gaps = 10/243 (4%)
Query: 95 FEQLLLHRNDAACPARGFYTYXXXXXXXXXXXXXXXXXX--XEARKREVAAFLGQTSHET 152
FEQL RN A GF+ Y ++E+AAFLG + +T
Sbjct: 69 FEQLFSKRNTPIAHAVGFWDYQSFITAAALFEPLGFGTTGGKLMGQKEMAAFLGHVASKT 128
Query: 153 TGGWATAPDGPYSWGYCFKEEIGATASYCVPS--AEWPCAPDKKYFGRGPIQLSYNYNYG 210
+ G+ A GP +WG C+ E+ SYC S ++PC+P +Y+GRG + + +N+NYG
Sbjct: 129 SCGYGVATGGPLAWGLCYNREMSPMQSYCDESWKFKYPCSPGAEYYGRGALPIYWNFNYG 188
Query: 211 PAGEAIGEDLLNNPELVASDPVVSFKTALWFWMTP-QSPKPSCHDVITGQWTPSSGDIAA 269
AGEA+ DLLN+PE + + ++F+ A+W WMTP + +PS HD+ G W P+ D +
Sbjct: 189 AAGEALKADLLNHPEYIEQNATLAFQAAIWRWMTPIKRAQPSAHDIFVGNWKPTKNDTLS 248
Query: 270 GRVPGYGVITNIINGGLECGFGPDDRVANRIGFYQRYCDVLGIGY-----GSNLDCYDQR 324
R P +G N++ G CG G D + N I Y + D++GIG L C +Q+
Sbjct: 249 KRGPTFGSTMNVLYGEYTCGQGSIDPMNNIISHYLYFLDLMGIGREDAGPNDELSCAEQK 308
Query: 325 PFN 327
PFN
Sbjct: 309 PFN 311
>AT3G16920.1 | chr3:5776663-5777886 REVERSE LENGTH=349
Length = 348
Score = 160 bits (405), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 88/243 (36%), Positives = 123/243 (50%), Gaps = 11/243 (4%)
Query: 95 FEQLLLHRNDAACPARGFYTYXXXXXXXXXXXXXXXXXXXEARK--REVAAFLGQTSHET 152
FE L RN A GF+ Y E + +EVAAFLG +T
Sbjct: 92 FENLFSKRNSPVAHAVGFWDYRSFITAAAEYQPLGFGTAGEKLQGMKEVAAFLGHVGSKT 151
Query: 153 TGGWATAPDGPYSWGYCFKEEIGATASYCVP--SAEWPCAPDKKYFGRGPIQLSYNYNYG 210
+ G+ A GP +WG C+ +E+ YC +PC P Y GRG + + +NYNYG
Sbjct: 152 SCGYGVATGGPLAWGLCYNKEMSPDQLYCDDYYKLTYPCTPGVSYHGRGALPVYWNYNYG 211
Query: 211 PAGEAIGEDLLNNPELVASDPVVSFKTALWFWMT-PQSPKPSCHDVITGQWTPSSGDIAA 269
GEA+ DLL++PE + ++ ++F+ A+W WMT P+ PS HDV G+W P+ D AA
Sbjct: 212 QTGEALKVDLLSHPEYLENNATLAFQAAIWRWMTPPKKHLPSAHDVFVGKWKPTKNDTAA 271
Query: 270 GRVPGYGVITNIINGGLECGFGPD-DRVANRIGFYQRYCDVLGIGY-----GSNLDCYDQ 323
R PG+G N++ G C G D D + N + Y Y D++G+G L C DQ
Sbjct: 272 KRTPGFGATINVLYGDQICNSGFDNDEMNNIVSHYLYYLDLIGVGREEAGPHEKLSCADQ 331
Query: 324 RPF 326
PF
Sbjct: 332 EPF 334
>AT3G54420.1 | chr3:20145935-20147034 FORWARD LENGTH=274
Length = 273
Score = 151 bits (381), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 98/288 (34%), Positives = 134/288 (46%), Gaps = 49/288 (17%)
Query: 35 CPNCLCCSSYGWCGSTSDYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVEAVVSKEL 94
C + LCCS +G+CG+TSDY +V +V++E
Sbjct: 33 CSSELCCSQFGFCGNTSDYCGVGCQQGPCFAPPPANGV------------SVAEIVTQEF 80
Query: 95 FEQLLLHRNDAACPARGFYTYXXXXXXXXXXXXXXXXXXXEARKREVAAFLGQTSHETTG 154
F ++ + ++C FY+ + +RE+AAF +HET
Sbjct: 81 FNGII-SQAASSCAGNRFYSRGAFLEALDSYSRFGRVGSTDDSRREIAAFFAHVTHET-- 137
Query: 155 GWATAPDGPYSWGYCFKEEI-GATASYCVPSA-EWPCAPDKKYFGRGPIQLSYNYNYGPA 212
+C+ EEI GA+ YC +A ++PC P+K Y+GRGPIQLS+N+NYGPA
Sbjct: 138 -----------GHFCYIEEIDGASKDYCDENATQYPCNPNKGYYGRGPIQLSWNFNYGPA 186
Query: 213 GEAIGEDLLNNPELVASDPVVSFKTALWFWMTPQSPKPSCHDVITGQWTPSSGDIAAGRV 272
G AIG D LN PE VA+DPV+SFKTALW+W P S
Sbjct: 187 GTAIGFDGLNAPETVATDPVISFKTALWYWTNRVQPVIS--------------------- 225
Query: 273 PGYGVITNIINGGLECGFGPDDRVANRIGFYQRYCDVLGIGYGSNLDC 320
G+G ING LEC V R+ +Y YC LG+ G+NL C
Sbjct: 226 QGFGATIRAINGALECDGANTATVQARVRYYTDYCRQLGVDPGNNLTC 273
>AT2G43610.1 | chr2:18088058-18089184 REVERSE LENGTH=282
Length = 281
Score = 144 bits (363), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 95/297 (31%), Positives = 128/297 (43%), Gaps = 44/297 (14%)
Query: 24 EQCGSQAGGALCPNCLCCSSYGWCGSTSDYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 83
+ CG+ C +CCS +G+CG+T Y
Sbjct: 29 QNCGTNG----CKGNMCCSRWGYCGTTKAYCGTGCQSGPCNSKPKPTPTPSGSGGLNAGP 84
Query: 84 XAVEAVVSKELFEQLLLHRNDAACPARGFYTYXXXXXXXXXXXXXXXXXXXEARKREVAA 143
A V F ++ + + CPA+GFYT KRE+AA
Sbjct: 85 RGTIASVITPAFFNSIMSKVGSGCPAKGFYT----RQAFIAAAESFAAYKGTVAKREIAA 140
Query: 144 FLGQTSHETTGGWATAPDGPYSWGYCFKEEIGATASYCVPSAEWPCAPDKKYFGRGPIQL 203
L Q SHE S +C+KEEI A YC PS +PC P K Y+GRGPIQ+
Sbjct: 141 MLAQFSHE-------------SGSFCYKEEI-ARGRYCSPSTTYPCQPGKNYYGRGPIQI 186
Query: 204 SYNYNYGPAGEAIGEDLLNNPELVASDPVVSFKTALWFWMTPQSPKPSCHDVITGQWTPS 263
++NYNYG AG+ +G LL +P++VA P V+F+ A+WFW P S
Sbjct: 187 TWNYNYGAAGKFLGLPLLKDPDMVARSPTVAFQCAMWFWNKNVRPVLS------------ 234
Query: 264 SGDIAAGRVPGYGVITNIINGGLECGFGPDDRVANRIGFYQRYCDVLGIGYGSNLDC 320
G+G T INGG EC G V +R+ Y +C LG+ G+NL C
Sbjct: 235 ---------QGFGATTRRINGG-ECNGGRPAAVQSRVNHYLDFCKKLGVTPGTNLSC 281
>AT2G43620.1 | chr2:18093954-18095025 REVERSE LENGTH=284
Length = 283
Score = 143 bits (361), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/300 (33%), Positives = 133/300 (44%), Gaps = 48/300 (16%)
Query: 24 EQCGSQAGGALCPNCLCCSSYGWCGSTSDYXXXXXXX---XXXXXXXXXXXXXXXXXXXX 80
+QCG+ C LCCS YG+CG+T Y
Sbjct: 29 QQCGTTG----CAANLCCSRYGYCGTTDAYCGTGCRSGPCSSSTTPIPPTPSGGAGGLNA 84
Query: 81 XXXXAVEAVVSKELFEQLLLHRNDAACPARGFYTYXXXXXXXXXXXXXXXXXXXEARKRE 140
+E VV+ F+ ++ + CPA+GFYT KRE
Sbjct: 85 DPRDTIENVVTPAFFDGIMSKVGNG-CPAKGFYT----RQAFIAAAQSFDAYKGTVAKRE 139
Query: 141 VAAFLGQTSHETTGGWATAPDGPYSWGYCFKEEIGATASYCVPSAEWPCAPDKKYFGRGP 200
+AA L Q SHE S +C+KEEI A YC PS +PC P K Y+GRGP
Sbjct: 140 IAAMLAQFSHE-------------SGSFCYKEEI-ARGKYCSPSTAYPCTPGKDYYGRGP 185
Query: 201 IQLSYNYNYGPAGEAIGEDLLNNPELVASDPVVSFKTALWFWMTPQSPKPSCHDVITGQW 260
IQ+++NYNYG AG+ +G LL +P++VA P V+F+ A+WFW P + Q
Sbjct: 186 IQITWNYNYGAAGKFLGLPLLTDPDMVARSPQVAFQCAMWFWNLNVRP-------VLDQ- 237
Query: 261 TPSSGDIAAGRVPGYGVITNIINGGLECGFGPDDRVANRIGFYQRYCDVLGIGYGSNLDC 320
G+G T INGG EC V +R+ +Y +C LGI G+NL C
Sbjct: 238 -------------GFGATTRKINGG-ECNGRRPAAVQSRVNYYLEFCRTLGITPGANLSC 283
>AT2G43590.1 | chr2:18081592-18082749 REVERSE LENGTH=265
Length = 264
Score = 136 bits (343), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/287 (32%), Positives = 128/287 (44%), Gaps = 55/287 (19%)
Query: 36 PNCLCCSSYGWCGSTSDYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVEAVVSKELF 95
PN LCCS +G+CG+ Y +V ++V++ F
Sbjct: 31 PN-LCCSQFGYCGTDDAYCGVGCRSGPCRGSGTPTGG------------SVGSIVTQGFF 77
Query: 96 EQLLLHRNDAACPARGFYTYXXXXXXXXXXXXXXXXXXXEARKREVAAFLGQTSHETTGG 155
++ ++ C + FYT +RE+A +HET
Sbjct: 78 NNII-NQAGNGCAGKRFYT----RDSFVNAANTFPNFANSVTRREIATMFAHFTHETGH- 131
Query: 156 WATAPDGPYSWGYCFKEEI-GATASYCVPS-AEWPCAPDKKYFGRGPIQLSYNYNYGPAG 213
+C+ EEI GAT +YC S ++PCAP K YFGRGPIQLS+NYNYG G
Sbjct: 132 ------------FCYIEEINGATRNYCQSSNTQYPCAPGKGYFGRGPIQLSWNYNYGACG 179
Query: 214 EAIGEDLLNNPELVASDPVVSFKTALWFWMTPQSPKPSCHDVITGQWTPSSGDIAAGRVP 273
+++G DLL PELV S+P V+F+T LWFWM P +
Sbjct: 180 QSLGLDLLRQPELVGSNPTVAFRTGLWFWMNSVRPVLN---------------------Q 218
Query: 274 GYGVITNIINGGLECGFGPDDRVANRIGFYQRYCDVLGIGYGSNLDC 320
G+G IN G+EC G V RIG+Y+ YC LG+ G NL C
Sbjct: 219 GFGATIRAIN-GMECNGGNSGAVNARIGYYRDYCGQLGVDPGPNLSC 264
>AT2G43570.1 | chr2:18076389-18077435 REVERSE LENGTH=278
Length = 277
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/292 (31%), Positives = 125/292 (42%), Gaps = 56/292 (19%)
Query: 35 CPNCLCCSSYGWCGSTSDYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVEAVVSKEL 94
C + CCS YG+CG+T ++ ++E V+ +
Sbjct: 36 CASDFCCSKYGYCGTTDEFCGEGCQAGPCRSSGGGGDPAV----------SLEGTVTPDF 85
Query: 95 FEQLLLHRNDAACPARGFYTYXXXXXXXXXXXXXXXXXXXEARKREVAAFLGQTSHETTG 154
F +L R D CP +GFYT+ KRE+AAF + ET
Sbjct: 86 FNSILNQRGD--CPGKGFYTHDTFMAAANSYPSFGA----SISKREIAAFFAHVAQET-- 137
Query: 155 GWATAPDGPYSWGYCFKEEI-----GATASYC-VPSAEWPCAPDKKYFGRGPIQLSYNYN 208
G+ C+ EEI A+ YC E+PCA K Y+GRG IQLS+NYN
Sbjct: 138 GF-----------MCYIEEIDGPAKAASGEYCDTEKPEFPCAQGKGYYGRGAIQLSWNYN 186
Query: 209 YGPAGEAIGEDLLNNPELVASDPVVSFKTALWFWMTPQSPKPSCHDVITGQWTPSSGDIA 268
YG G+A+ E+LL +PE VA D V++FKTA WFW T ++
Sbjct: 187 YGLCGKALDENLLASPEKVAQDQVLAFKTAFWFWTT---------------------NVR 225
Query: 269 AGRVPGYGVITNIINGGLECGFGPDDRVANRIGFYQRYCDVLGIGYGSNLDC 320
G+G +N G + ANRI ++Q YC LG+ G NL C
Sbjct: 226 TSFKSGFGATIRAVNSRECSGGDSTAKAANRIKYFQDYCGKLGVAPGDNLTC 277
>AT2G43580.1 | chr2:18078817-18080013 REVERSE LENGTH=266
Length = 265
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 129/287 (44%), Gaps = 54/287 (18%)
Query: 36 PNCLCCSSYGWCGSTSDYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVEAVVSKELF 95
PN LCCS +G+CG+T+DY + + ++F
Sbjct: 31 PN-LCCSQFGYCGTTADYCGSTCQSGPCRVGGPPTGA------------GLVGNIVTQIF 77
Query: 96 EQLLLHRNDAACPARGFYTYXXXXXXXXXXXXXXXXXXXEARKREVAAFLGQTSHETTGG 155
++++ C + FYT +RE+A ++ET
Sbjct: 78 FNNIINQAGNGCAGKSFYT----RDSFINATNTFPSFANTVTRREIATMFAHFTYETGH- 132
Query: 156 WATAPDGPYSWGYCFKEEI-GATASYC-VPSAEWPCAPDKKYFGRGPIQLSYNYNYGPAG 213
+C+ EEI GA+ C + ++PCAP K Y GRGP+ LS+N+NYG G
Sbjct: 133 ------------FCYIEEINGASRVMCDQNNRQYPCAPAKSYHGRGPLLLSWNFNYGACG 180
Query: 214 EAIGEDLLNNPELVASDPVVSFKTALWFWMTPQSPKPSCHDVITGQWTPSSGDIAAGRVP 273
+++G DLL PELV+S+PVV+F+TALWFWM +S +P +
Sbjct: 181 QSLGLDLLRQPELVSSNPVVAFRTALWFWM--KSVRPVLNQ------------------- 219
Query: 274 GYGVITNIINGGLECGFGPDDRVANRIGFYQRYCDVLGIGYGSNLDC 320
G+G I+ G +C V RIG+Y+ YC LG+ G+N+ C
Sbjct: 220 GFGATIRAIS-GFDCDGRNLGGVNARIGYYRDYCGQLGLDPGANITC 265
>AT2G43600.1 | chr2:18086049-18087018 REVERSE LENGTH=274
Length = 273
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 117/236 (49%), Gaps = 43/236 (18%)
Query: 86 VEAVVSKELFEQLLLHRNDAACPARGFYTYXXXXXXXXXXXXXXXXXXXEARKREVAAFL 145
+E V++ LF+ ++ + ++ C A+GFYTY + KRE+AA L
Sbjct: 80 IETVITSALFDSIM-SKVESNCSAKGFYTYEAFITAFKSFGAYKG----KVAKREIAAIL 134
Query: 146 GQTSHETTGGWATAPDGPYSWGYCFKEEIGATASYCVPSAEWPCAPDKKYFGRGPIQ-LS 204
S+ + +C+KEEI + YC S ++PC P K Y+GRG +Q ++
Sbjct: 135 AHFSYGSKS-------------FCYKEEI-SNERYCSKSKKYPCEPGKNYYGRGLLQSIT 180
Query: 205 YNYNYGPAGEAIGEDLLNNPELVASDPVVSFKTALWFWMTPQSPKPSCHDVITGQWTPSS 264
+N YG AG+ +G LL +P+LV+ P V+FK A+WFW ++ +P+ +
Sbjct: 181 WNEYYG-AGKHLGLPLLKDPDLVSRSPEVAFKFAMWFW--NRNVRPALY----------- 226
Query: 265 GDIAAGRVPGYGVITNIINGGLECGFGPDDRVANRIGFYQRYCDVLGIGYGSNLDC 320
G+G IT ++ G ECG D N++ Y +C++LG+ LDC
Sbjct: 227 --------LGFGEITKRVD-GRECGNWRRDDTKNKVKQYIEFCEMLGVTPDQGLDC 273
>AT1G56680.1 | chr1:21250428-21251417 REVERSE LENGTH=281
Length = 280
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 109/238 (45%), Gaps = 44/238 (18%)
Query: 86 VEAVVSKELFEQLLLHRNDAACPARGFYTYXXXXXXXXXXXXXXXXXXXEARKREVAAFL 145
+E++V+ LF +L+ + + C +GFYT KRE+AA L
Sbjct: 84 IESIVTPALFHRLM-RKVGSNCTGKGFYT----REAFITAVKSFEGYKGTVAKREIAAIL 138
Query: 146 GQTSHETTGGWATAPDGPYSWGYCFKEEIGATASYCVPSAEWPCAPDKKYFGRGPIQ-LS 204
Q S+E S +C+KEE+ + +YC S +PC KKY+GRG +Q +
Sbjct: 139 AQFSYE-------------SGNFCYKEEV-TSETYCSSSKTYPCQSGKKYYGRGLLQSIK 184
Query: 205 YNYNYGPAGEAIGEDLLNNPELVASDPVVSFKTALWFWMTPQSPKPSCHDVITGQWTPSS 264
+N YG AG+ +G LL +P++VA P V+FK A+WFW T P
Sbjct: 185 WNEFYGEAGKYLGLPLLKDPDMVARSPEVAFKFAMWFWKTEVGPSLRL------------ 232
Query: 265 GDIAAGRVPGYGVITNIINGGLECGFGP--DDRVANRIGFYQRYCDVLGIGYGSNLDC 320
G+G T IN G+ECG + + NRI Y C G+ G +L C
Sbjct: 233 ---------GFGATTMRIN-GIECGGMSWNAEAMQNRINQYLEICKWFGVNPGKDLYC 280
>AT3G47540.2 | chr3:17521044-17522467 FORWARD LENGTH=284
Length = 283
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 75/178 (42%), Gaps = 51/178 (28%)
Query: 138 KREVAAFLGQTSHETTGGWATAPDGPYSWGYCFKEEIGATAS-YCVPSAEW-PC-APDKK 194
+RE+A+ +HET +C+ EEI + C + E PC + K
Sbjct: 77 RREIASMFAHVTHET-------------GHFCYIEEIKKRSRGRCDENVEQRPCPSQSKG 123
Query: 195 YFGRGPIQLSYNYNYGPAGEAIGEDLLNNPELVASDPVVSFKTALWFWMTPQSPKPSCHD 254
+ GRG +++G DLL PELV S+P V+F+ L FW+ P
Sbjct: 124 HSGRGH-------------QSLGLDLLRQPELVGSNPTVAFRKGLSFWINSVRP------ 164
Query: 255 VITGQWTPSSGDIAAGRVPGYGVITNIINGGLECGFGPDDRVANRIGFYQRYCDVLGI 312
+ Q G+G IN G+EC G V RIG+Y+ YC LG+
Sbjct: 165 -VLNQ--------------GFGATIRAIN-GMECNGGNSGAVKARIGYYRDYCRQLGV 206
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.137 0.460
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,561,314
Number of extensions: 267929
Number of successful extensions: 513
Number of sequences better than 1.0e-05: 15
Number of HSP's gapped: 480
Number of HSP's successfully gapped: 16
Length of query: 334
Length of database: 11,106,569
Length adjustment: 99
Effective length of query: 235
Effective length of database: 8,392,385
Effective search space: 1972210475
Effective search space used: 1972210475
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 112 (47.8 bits)