BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0389500 Os05g0389500|AK098939
(389 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G31500.4 | chr1:11273821-11276534 REVERSE LENGTH=418 414 e-116
AT1G31530.1 | chr1:11281188-11282468 REVERSE LENGTH=284 185 3e-47
AT5G11350.1 | chr5:3621583-3625412 FORWARD LENGTH=755 104 9e-23
AT3G58560.1 | chr3:21650880-21653896 REVERSE LENGTH=603 99 3e-21
AT3G58580.1 | chr3:21660866-21663697 REVERSE LENGTH=604 95 7e-20
AT3G18500.3 | chr3:6352544-6355297 FORWARD LENGTH=450 88 8e-18
AT1G73875.1 | chr1:27781112-27784571 FORWARD LENGTH=455 88 9e-18
>AT1G31500.4 | chr1:11273821-11276534 REVERSE LENGTH=418
Length = 417
Score = 414 bits (1063), Expect = e-116, Method: Compositional matrix adjust.
Identities = 198/333 (59%), Positives = 249/333 (74%), Gaps = 14/333 (4%)
Query: 60 AGYQFRLVSYNILAQVYVKSAFFPHSPSACLKWKTRSKAVLSELKSFEADLMCIQELDEY 119
+G +FRLVSYNILAQVYVKSA PHSP ACLKWK RS A+LS LK+ +AD C+QE+DEY
Sbjct: 88 SGIRFRLVSYNILAQVYVKSALLPHSPPACLKWKARSHAILSVLKNLQADFFCLQEVDEY 147
Query: 120 DTFYKKNMENSGYSSIYIQRSGD-KRDGCGIFYKPKSMELVQKEVLHYNDLVEKYVHTDH 178
D+FY+ NM++ GYS IYIQR+G KRDGC IFYKP ELV KE + YNDLV D
Sbjct: 148 DSFYRNNMDSLGYSGIYIQRTGQRKRDGCAIFYKPSCAELVTKERIEYNDLV------DS 201
Query: 179 VNSDTSNNSSPTEEASKKVDNNKHG--DPNDPRFRLKRDCVGLLAAFKLNDPCDHILIMA 236
+ +D+ + S E S + +++ D NDP RLKRDCVG++AAF++N P HI+I+A
Sbjct: 202 IKADSVSCSEQKIETSNEGKDSRKDSRDLNDPLVRLKRDCVGIMAAFRINKPFQHIVIVA 261
Query: 237 NTHIYWDPEWIDVKLAQAKYILSRVTQFEKLISNKFNCKPSVMIAGDFNSTPGDKVYNYL 296
NTH+YWDPE DVKLAQAKY+LSR+ QF+ LIS++F C PS+++AGDFNS PGD VY+YL
Sbjct: 262 NTHLYWDPELADVKLAQAKYLLSRLAQFKTLISDEFECTPSLLLAGDFNSIPGDMVYSYL 321
Query: 297 VSANSDST-----DEAPIKLRSLYAANGGEPEFTNCTPGFTGTLDYIFLSDGSSVKPTSL 351
VS N+ T +EAP+ L S+Y GEP+FTNCTPGFT TLDYIF+S +KP S+
Sbjct: 322 VSGNAKPTETIEEEEAPVPLSSVYEVTRGEPKFTNCTPGFTNTLDYIFISPSDFIKPVSI 381
Query: 352 LRIPRGDSAEVQGGLPNFHHPSDHLPIGADFQV 384
L++P DS +V G LPN HHPSDHLPIGA+F++
Sbjct: 382 LQLPEPDSPDVVGFLPNHHHPSDHLPIGAEFEI 414
>AT1G31530.1 | chr1:11281188-11282468 REVERSE LENGTH=284
Length = 283
Score = 185 bits (470), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 116/304 (38%), Positives = 169/304 (55%), Gaps = 38/304 (12%)
Query: 85 SPSACLKWKTRSKAVLSELKSFEADLMCIQELDEYDTFYKKNMENSGYSSIYIQRSGDKR 144
SP + W+ RSKA+L +K+FEAD +C+QE+DEY +F+ +NME GYS I I+ +
Sbjct: 10 SPPESILWEKRSKAILDNIKNFEADFICLQEVDEYHSFFDRNMEAQGYSGIPIEN----K 65
Query: 145 DG--CGIFYKPKSMELVQKEVLHYNDLVEKYVHTDHVNSDTSNNSSPTEEASKKVDNNKH 202
+G C IF+KPK E + + +T + N + +SS S V N
Sbjct: 66 EGYECAIFFKPKFAEFITYQTTRIQG------YTKYENLCVAPSSSTVSSESSDVVN--- 116
Query: 203 GDPNDPRFRLKRDCVGLLAAFKLNDPCDHILIMANTHIY-WDPE-WIDVKLAQAKYILSR 260
+ ++ AFK+ P +H++I+A++H+ P+ W D+KLAQ K +++
Sbjct: 117 ----------AEELSVVMVAFKILKPFNHVVIIASSHLKSGKPDRWDDLKLAQVKTLMTE 166
Query: 261 VTQFEKLISNKFNCKPSVMIAGDFNSTPGDKVYNYLVSANSDSTDEAPIKLRSLYAANGG 320
+ F+++IS NC PSV++AGDFNS P V+ Y+ S N S I LRS+Y G
Sbjct: 167 LASFKEIISALTNCSPSVILAGDFNSKP--YVHKYINSDNIPSD----IDLRSVYEFTKG 220
Query: 321 EPEFTNCTPGFTGTLDYIFLSDGSSVKPTSLLRIPRGDSAEVQGGLPNFHHPSDHLPIGA 380
EP FTN PGF TLDY+F + + P LL DS + LPN HPSDHLPIG
Sbjct: 221 EPRFTNNVPGFAETLDYMFYTHSEIISPVKLL-----DSPDEVDFLPNEIHPSDHLPIGV 275
Query: 381 DFQV 384
+F++
Sbjct: 276 EFEI 279
>AT5G11350.1 | chr5:3621583-3625412 FORWARD LENGTH=755
Length = 754
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 125/276 (45%), Gaps = 50/276 (18%)
Query: 63 QFRLVSYNILAQV----YVKSAFFPHSPSACLKWKTRSKAVLSELKSFEADLMCIQELDE 118
+F ++SYNILA + +S +F H P L W R ++ EL + AD+MC+QE+D+
Sbjct: 182 KFVVLSYNILADYLANDHWRSLYF-HIPRNMLSWGWRKSKLVFELSLWSADIMCLQEVDK 240
Query: 119 YDTFYKKNMENSGYSSIYIQRSGDKRDGCGIFYKPKSMELVQKEVLHYNDL------VEK 172
+ ++ M++ GYS+I+ R+G+ DGC IF++ +LV +E + +N L +
Sbjct: 241 FQDL-EEEMKHRGYSAIWKMRTGNAVDGCAIFWRSNRFKLVHEESIQFNQLGLRDNVAQI 299
Query: 173 YVHTDHVNSDTSNNSSPTEEASKKVDNNKHGDPNDPRFRLKRDCVGLLAAFKLNDPCDHI 232
V + S T N +P E+S H
Sbjct: 300 CVLETLLTSHTKENETPPPESSAG---------------------------------SHR 326
Query: 233 LIMANTHIYWDPEWIDVKLAQAKYILSRVTQFEKLISNKFNCKPSVMIAGDFNSTPGDKV 292
+++ N H+ ++P+ D KL Q + +L + KL + +++ GDFN TP +
Sbjct: 327 VVICNIHVLFNPKRGDFKLGQVRTLLDKAHAVSKLWDDA-----PIVLCGDFNCTPKSPL 381
Query: 293 YNYLVSANSDSTDEAPIKLRSLYAANGGEPEFTNCT 328
YN++ D + A K+ +A P N T
Sbjct: 382 YNFISDRKLDLSGLARDKVSGQVSAEFRPPRPENYT 417
>AT3G58560.1 | chr3:21650880-21653896 REVERSE LENGTH=603
Length = 602
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/379 (24%), Positives = 153/379 (40%), Gaps = 90/379 (23%)
Query: 64 FRLVSYNILAQVYVKSAFFPHSPSACLKWKTRSKAVLSELKSFEADLMCIQEL--DEYDT 121
F ++SYNIL+ Y S + + P+ L W R + +L E+ + AD++C+QE+ D ++
Sbjct: 248 FTVLSYNILSDTYASSDIYSYCPTWALAWTYRRQNLLREIVKYRADIVCLQEVQNDHFEE 307
Query: 122 FYKKNMENSGYSSIYIQRSGD-------KRDGCGIFYKPKSMELVQKEVLHYNDLVEKYV 174
F+ ++ GY ++ +++ + DGC F++ V+K + +N +
Sbjct: 308 FFLPELDKHGYQGLFKRKTNEVFIGNTNTIDGCATFFRRDRFSHVKKYEVEFNKAAQSLT 367
Query: 175 HTDHVNSDTSNNSSPTEEASKKVDNNKHGDPNDPRFRLKRDCVGLLAAFKL--------N 226
EA V K+ RL +D V L+ + N
Sbjct: 368 -----------------EAIIPVSQKKNA-----LNRLVKDNVALIVVLEAKFGSQAADN 405
Query: 227 DPCDHILIMANTHIYWDPEWIDVKLAQAKYILSRVTQFEKLISNKFNCKPSVMIAGDFNS 286
+L +ANTH+ E DVKL Q +L EK+ ++ +++ GDFN+
Sbjct: 406 PGKRQLLCVANTHVNVPHELKDVKLWQVHTLLK---GLEKIAASA---DIPMLVCGDFNT 459
Query: 287 TPGDKVYNYLVSANSDS-------------------TDEAP-IKLRSLYAANGG------ 320
P + L D T + P + S +A GG
Sbjct: 460 VPASAPHTLLAVGKVDPLHPDLMVDPLGILRPHSKLTHQLPLVSAYSQFAKMGGNVITEQ 519
Query: 321 ----------EPEFTNCTPGFTGTLDYIFLS-DGSSV---KPTSLLRIPRGDSAEVQGGL 366
EP FTNCT F GTLDYIF + D +V R D+A L
Sbjct: 520 QRRRLDPASSEPLFTNCTRDFIGTLDYIFYTADTLTVESLLELLDEESLRKDTA-----L 574
Query: 367 PNFHHPSDHLPIGADFQVL 385
P+ SDH+ + A+F+ +
Sbjct: 575 PSPEWSSDHIALLAEFRCM 593
>AT3G58580.1 | chr3:21660866-21663697 REVERSE LENGTH=604
Length = 603
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 90/378 (23%), Positives = 153/378 (40%), Gaps = 91/378 (24%)
Query: 64 FRLVSYNILAQVYVKSAFFPHSPSACLKWKTRSKAVLSELKSFEADLMCIQEL--DEYDT 121
F ++SYNIL+ S + + P L W R + +L E+ + AD++C+QE+ D +
Sbjct: 251 FTVLSYNILSDTSASSDLYSYCPPWALSWPYRRQNLLREIVGYRADVVCLQEVQSDHFHE 310
Query: 122 FYKKNMENSGYSSIYIQRSGD-------KRDGCGIFYKPKSMELVQKEVLHYNDLVEKYV 174
+ ++ GY ++Y +++ + DGC F++ V+K + +N +
Sbjct: 311 IFAPELDKHGYQALYKRKTNEVLSGSTSAIDGCATFFRRDRFSHVKKYDVEFNKAAQSL- 369
Query: 175 HTDHVNSDTSNNSSPTEEASKKVDNNKHGDPNDPRFRLKRDCVGLLAAFKL---NDPCD- 230
TD + +A K+ N RL +D + L+ + N P D
Sbjct: 370 -TDAL----------IPQAQKRTALN----------RLVKDNIALIVVLEAKFGNQPTDP 408
Query: 231 ----HILIMANTHIYWDPEWIDVKLAQAKYILSRVTQFEKLISNKFNCKPSVMIAGDFNS 286
++ +ANTH+ + DVKL Q +L EK+ + + +++ GDFN+
Sbjct: 409 SGKRQLICVANTHVNVQQDLKDVKLWQVHTLLK---GLEKIAA---SADIPMLVCGDFNT 462
Query: 287 TPGDKVYNYLVSANSDS-------------------TDEAPI------------------ 309
PG + LV D T + P+
Sbjct: 463 LPGSAPHTLLVMGKVDPMHPDLAVDPLNILRPHTKLTHQLPLVSAYSSFVRKGIMGLGLE 522
Query: 310 KLRSLYAANGGEPEFTNCTPGFTGTLDYIFLSDGS----SVKPTSLLRIPRGDSAEVQGG 365
+ R N EP FTNCT F GT DYIF + + S+ R D+A
Sbjct: 523 QHRRRIDLNTNEPLFTNCTRDFIGTHDYIFYTADTLMVESLLELLDEDGLRKDTA----- 577
Query: 366 LPNFHHPSDHLPIGADFQ 383
LP+ S+H+ + A+F+
Sbjct: 578 LPSPEWSSNHIALLAEFR 595
>AT3G18500.3 | chr3:6352544-6355297 FORWARD LENGTH=450
Length = 449
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 108/240 (45%), Gaps = 51/240 (21%)
Query: 63 QFRLVSYNILA--QVYVKSAFFPHSPSACLKWKTRSKAVLSELKSFEADLMCIQELDEYD 120
+F +VSYNIL + + LKW R + + EL D++ +QE+D+Y
Sbjct: 108 RFTVVSYNILGDGNSSYHRELYSNVSVPYLKWGYRKRLICEELIRLNPDIISMQEVDKYF 167
Query: 121 TFYKKNMENSGYSSIYIQRSGDKRDGCGIFYKPKSMELVQKEVLHYNDLVEKYVHTDHVN 180
+ ME +GY+ Y +R+GD DGC +F+K ++++E + ++
Sbjct: 168 DLFSM-MEKAGYAGSYKRRTGDNVDGCAMFWKADRFGVLERENIEFS------------- 213
Query: 181 SDTSNNSSPTEEASKKVDNNKHGDPNDPRFRLKRDCVGLLAAFKLNDPC-DHILIMANTH 239
+F + RD V LA +L +++ N H
Sbjct: 214 ----------------------------QFGM-RDNVAQLAVLELRKSNKSRKILLGNIH 244
Query: 240 IYWDPEWIDVKLAQAKYILSRVTQFEKLISNKFNCKPSVMIAGDFNSTPGDKVYNYLVSA 299
+ ++P DVKL Q + + S+ L+S K+ P +++ GDFNSTP +YN+L S+
Sbjct: 245 VLYNPNQGDVKLGQVRSLCSKA----HLLSKKWGDIP-IVLCGDFNSTPKSPLYNFLASS 299
>AT1G73875.1 | chr1:27781112-27784571 FORWARD LENGTH=455
Length = 454
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 114/243 (46%), Gaps = 44/243 (18%)
Query: 66 LVSYNILAQVYVKSA-----FFPHSPSACLKWKTRSKAVLSELKSFEADLMCIQELDEYD 120
LVSYN+L V +A + + P L+W R + E+ + A ++C+QE+D +D
Sbjct: 102 LVSYNLLG---VDNASNHMDLYYNVPRKHLEWSRRKHLICKEISRYNASILCLQEVDRFD 158
Query: 121 TFYKKNMENSGYSSIYIQRSGDKRDGCGIFYKPKSMELVQKEVLHYNDLVEKYVHTDHVN 180
++N G+ ++ R+G+ DGC IF+K EL+ + + ++
Sbjct: 159 DL-DVLLKNRGFRGVHKSRTGEASDGCAIFWKENLFELLDHQHIEFDKF----------- 206
Query: 181 SDTSNNSSPTEEASKKVDNNKHGDPNDPRFRLKRDCVGLLAAFKLNDPCDHILIMANTHI 240
NN + + DP+ +L+ + +DP L++ N H+
Sbjct: 207 -GMRNNVAQLCVLEMNCE-------EDPKSKLR---------VRSSDP--RRLVVGNIHV 247
Query: 241 YWDPEWIDVKLAQAKYILSRVTQFEKLISNKFNCKPSVMIAGDFNSTPGDKVYNYLVSAN 300
++P+ D+KL Q + L + + +S ++ P V IAGD NSTP +Y+++ SA+
Sbjct: 248 LFNPKRGDIKLGQVRLFLEKAYK----LSQEWGNIP-VAIAGDLNSTPQSAIYDFIASAD 302
Query: 301 SDS 303
D+
Sbjct: 303 LDT 305
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.317 0.133 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,613,668
Number of extensions: 379542
Number of successful extensions: 1059
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 1039
Number of HSP's successfully gapped: 8
Length of query: 389
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 289
Effective length of database: 8,364,969
Effective search space: 2417476041
Effective search space used: 2417476041
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 113 (48.1 bits)