BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0388600 Os05g0388600|AK105904
(378 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G12470.1 | chr5:4044950-4047290 REVERSE LENGTH=387 442 e-124
AT2G40400.1 | chr2:16869363-16872569 FORWARD LENGTH=736 181 5e-46
AT3G56140.1 | chr3:20829407-20832669 FORWARD LENGTH=746 180 1e-45
AT5G22790.1 | chr5:7599395-7601573 REVERSE LENGTH=434 106 2e-23
AT2G37860.3 | chr2:15856952-15858793 FORWARD LENGTH=433 100 9e-22
AT3G08630.1 | chr3:2620943-2621962 FORWARD LENGTH=340 89 5e-18
AT3G08640.1 | chr3:2622992-2624005 FORWARD LENGTH=338 84 8e-17
AT5G24690.1 | chr5:8455783-8458513 REVERSE LENGTH=522 58 7e-09
>AT5G12470.1 | chr5:4044950-4047290 REVERSE LENGTH=387
Length = 386
Score = 442 bits (1136), Expect = e-124, Method: Compositional matrix adjust.
Identities = 209/283 (73%), Positives = 241/283 (85%)
Query: 96 NRREALFVLAQLGRKLESLPADLAAAIEGGRVPGEIVQRFADLEKSGLFRWLLQFGGFKE 155
NR EA+ +L + G +LESLP DLAAAIE GR+PG ++ RF +L+KS + RWL+QFGGF+E
Sbjct: 101 NRNEAMLLLKESGIELESLPKDLAAAIEAGRIPGSVITRFLELQKSAVMRWLMQFGGFRE 160
Query: 156 RLLADDLFLAKVAMECGVGIFTKTAAEYERRRENFVKELXXXXXXXXXXXXXXXXLVWLP 215
RLLADDLF+AK+AMECGVGIFTKTAAEYERRRENF EL LV+LP
Sbjct: 161 RLLADDLFMAKLAMECGVGIFTKTAAEYERRRENFFNELEVVFADVAMAIIADFMLVYLP 220
Query: 216 APTVSLQPPLAVNAGSIAKFFHNCPDNAFQVALAGTSYSLLQRVGAIMRNGAKLFAVGTS 275
APTVSL+PPLA+ AG I+KFFHNCPDNAFQVAL+GTSY+LLQR+GAI RNGAKLFAVGT+
Sbjct: 221 APTVSLRPPLALTAGGISKFFHNCPDNAFQVALSGTSYTLLQRLGAITRNGAKLFAVGTT 280
Query: 276 ASLIGTGVTNALIKARKAVSKDFEGESEDIPIVSTSVAYGVYMAVSSNLRYQILAGVIEQ 335
+SL+GT +TNA IKARKAV ++ EGE E +PIVSTSVAYGVYMAVSSNLRYQI+AGVIEQ
Sbjct: 281 SSLVGTAITNAFIKARKAVDQNSEGEVETVPIVSTSVAYGVYMAVSSNLRYQIVAGVIEQ 340
Query: 336 RMLEPLLHHHKLVLSALCFAVRTGNTFLGSLLWVDYAKWIGIQ 378
R+LEP+LH HKL LSALCFAVRTGNTFLGSLLWVDYA+ IGIQ
Sbjct: 341 RLLEPMLHQHKLALSALCFAVRTGNTFLGSLLWVDYARLIGIQ 383
>AT2G40400.1 | chr2:16869363-16872569 FORWARD LENGTH=736
Length = 735
Score = 181 bits (460), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 107/293 (36%), Positives = 165/293 (56%), Gaps = 13/293 (4%)
Query: 96 NRREALFVLAQLGRKLESLPADLAAAIEGGRVPGEIVQRFADLEKSGLFRWLLQ-FGGFK 154
+R E V+ GR+ ++LP D+ ++ G V EI+Q F DLE+ L L Q F GF+
Sbjct: 410 DRAEIARVMNAAGRRRDALPQDIQKGLDLGLVSPEILQNFFDLEQYPLISELTQRFQGFR 469
Query: 155 ERLLADDLFLAKVAMECGVGIFTKTAAEYERRRENFVKELXXXXXXXXXXXXXXXXLVWL 214
ERLLAD FL ++A+E + I T A+YE+R+ENF +EL VWL
Sbjct: 470 ERLLADPKFLNRLAIEEAISITTTLVAQYEKRKENFFEELDYVITDSVRASVVDFFTVWL 529
Query: 215 PAPTVSLQP-------PLAVNAGSIAKFFHNCPDNAFQVALAGTSYSLLQRVGAIMRNGA 267
PAPT+S P +++A + + PDNAFQ +L G ++L R+ +++ G
Sbjct: 530 PAPTLSFISYADETIGPNSIDA--LRGLLGSIPDNAFQKSLGGQEWTLSLRIASVIIGGL 587
Query: 268 KLFAVGTSASLIGTGVTNALIKARKAVSKDFE-GE-SEDIPIVSTSVAYGVYMAVSSNLR 325
KL VG +S G +NAL RK + + GE ++ P++ T++ YG Y+ SSN+R
Sbjct: 588 KLAGVGVVSSFAAVGSSNALYAIRKFIKPELGVGEQAKRSPMLKTALVYGGYLGTSSNIR 647
Query: 326 YQILAGVIEQRMLEPLLHHHKLVLSALCFAVRTGNTFLGSLLWVDYAKWIGIQ 378
YQI+AG+IE R+ + L L+++ + F VR N++ G+ W+D A+ G+Q
Sbjct: 648 YQIIAGLIEHRISDE-LSSQPLLVNMISFVVRVANSYFGTQQWIDLARSTGLQ 699
>AT3G56140.1 | chr3:20829407-20832669 FORWARD LENGTH=746
Length = 745
Score = 180 bits (456), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 105/293 (35%), Positives = 166/293 (56%), Gaps = 13/293 (4%)
Query: 96 NRREALFVLAQLGRKLESLPADLAAAIEGGRVPGEIVQRFADLEKSGLFRWLLQ-FGGFK 154
+R E V+ GR+ ++LP D+ ++ G V E++Q DLE+ L L Q F GF+
Sbjct: 419 DRAEIARVMNAAGRRRDALPPDIQNGLDLGLVSPEVLQNLFDLEQYPLISELTQRFQGFR 478
Query: 155 ERLLADDLFLAKVAMECGVGIFTKTAAEYERRRENFVKELXXXXXXXXXXXXXXXXLVWL 214
ERLLAD FL ++A+E + I T A+YE+R+ENF +E+ VWL
Sbjct: 479 ERLLADPKFLNRLAIEEAISITTTLIAQYEKRKENFFEEIDYVITDTVRGSVVDFFTVWL 538
Query: 215 PAPTVSL-------QPPLAVNAGSIAKFFHNCPDNAFQVALAGTSYSLLQRVGAIMRNGA 267
PAPT+S P +++A + + PDNAFQ +LAG ++L R+ +++ G
Sbjct: 539 PAPTLSFLSYADETTGPDSIDA--LRGLLGSIPDNAFQKSLAGREWNLNLRIASVIVGGL 596
Query: 268 KLFAVGTSASLIGTGVTNALIKARKAVSKDF--EGESEDIPIVSTSVAYGVYMAVSSNLR 325
KL VG +S G +NAL ARK + + + + P++ T++ YG ++ S+NLR
Sbjct: 597 KLAGVGVVSSFAAVGASNALNIARKVIKPELVVAEKPKRSPLLKTAMVYGGFLGTSANLR 656
Query: 326 YQILAGVIEQRMLEPLLHHHKLVLSALCFAVRTGNTFLGSLLWVDYAKWIGIQ 378
YQI+AG+IE R+ + L L+++A+ F VRT N++ G+ W+D A+ G+Q
Sbjct: 657 YQIIAGLIEHRLSDE-LSSQPLLVNAISFVVRTLNSYFGTQQWIDLARSTGLQ 708
>AT5G22790.1 | chr5:7599395-7601573 REVERSE LENGTH=434
Length = 433
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 132/289 (45%), Gaps = 22/289 (7%)
Query: 103 VLAQLGRKLESLPADLAAAIEGGRVPGEIVQRFADLEKSGLFRWLLQF-----GGFKERL 157
V+ + R+ +LP D+ A + + + R+ DL+ S W L F + R+
Sbjct: 154 VMKETERRGITLPEDMLEAAKSVGIRKLFLLRYLDLQGS---VWPLGFLMRSCAMLRNRM 210
Query: 158 LADDLFLAKVAMECGVGIFTKTAAEYERRRENFVKELXXXXXXXXXXXXXXXXLVWLPAP 217
LAD FL KV E + T AE ++R E+F E LV L AP
Sbjct: 211 LADPSFLFKVGTEVAIDSCCATFAEVQKRGEDFWSEFELYAADLLVGLVVDVALVGLLAP 270
Query: 218 TVSLQPPLAVNAGSIAKFFHNC---PDNAFQVALAGTSYSLLQRVGAIMRNGAKLFAVGT 274
+ P + G C P + F+ G +S+ QR+ G +VG
Sbjct: 271 YARIGKPSVASTGLFKDLKRACASLPSSVFEAERPGCKFSVNQRIATFFYKGLLYGSVGF 330
Query: 275 SASLIGTGVTNALIKARKAVSKDFEGESEDIPI---VSTSVAYGVYMAVSSNLRYQILAG 331
LIG G+ N ++ A+++V K ED+PI ++ +GV++ +SSN RYQI+ G
Sbjct: 331 GCGLIGQGIANLIMTAKRSVKKS----EEDVPIPPLFESAALWGVFLGLSSNARYQIING 386
Query: 332 VIEQRMLEPLLHHHKLVLSALCF--AVRTGNTFLGSLLWVDYAKWIGIQ 378
+ +R++E ++ + A+ F VR N G + +VD+AK G+Q
Sbjct: 387 L--ERVVEGSTAAKRIPVVAMAFTVGVRFANNVYGGMQFVDWAKLSGVQ 433
>AT2G37860.3 | chr2:15856952-15858793 FORWARD LENGTH=433
Length = 432
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 133/275 (48%), Gaps = 15/275 (5%)
Query: 113 SLPADLAAAIEGGRVPGEIVQRFADLEKS-GLFRWLLQ-FGGFKERLLADDLFLAKVAME 170
+LP+D+ A + + ++ R+ DL+ S GL + ++ + + R+LAD FL K+ E
Sbjct: 164 TLPSDMLEAAKNYGIRKVLLLRYLDLQSSAGLLGFAIRSWAMLRNRMLADPSFLFKIGAE 223
Query: 171 CGVGIFTKTAAEYERRRENFVKELXXXXXXXXXXXXXXXXLVWLPAPTVSLQPPLAVNA- 229
+ T AE ++R ++F E LV + AP V P A
Sbjct: 224 IVIDSCCATVAEVQKRGKDFWAEFELYVADLLVGTVVNIALVGMLAPYVRFGQPSASPGF 283
Query: 230 -GSIAKFFHNCPDNAFQVALAGTSYSLLQRVGAIMRNGAKLFAVGTSASLIGTGVTNALI 288
G + ++ P + F+ G +S QR+ G AVG ++G G+ N ++
Sbjct: 284 LGRMVFAYNALPSSVFEAERPGCRFSAQQRLATYFYKGIMYGAVGFGCGIVGQGIANLIM 343
Query: 289 KARKAVSKDFEGESEDIPI---VSTSVAYGVYMAVSSNLRYQILAGVIEQRMLEPLLHHH 345
A++ ++K E+IP+ + ++ +GV+++VSSN RYQI+ G+ +R++E
Sbjct: 344 TAKRNINKS----EENIPVPPLIKSAALWGVFLSVSSNTRYQIINGL--ERVVEASPFAK 397
Query: 346 KLVLSALCF--AVRTGNTFLGSLLWVDYAKWIGIQ 378
K +A+ F VR N G + +VD+A+ G Q
Sbjct: 398 KFPPAAMAFTVGVRLANNIYGGMQFVDWARLSGCQ 432
>AT3G08630.1 | chr3:2620943-2621962 FORWARD LENGTH=340
Length = 339
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 107/232 (46%), Gaps = 21/232 (9%)
Query: 152 GFKERLLADDLFLAKVAMECGVGIFTKTAAEYERRRENFVKELXXXXXXXXXXXXXXXXL 211
G++ R+ AD F KV ME VG+ + R + EL L
Sbjct: 104 GWRSRVAADSQFPFKVLMEMLVGVSANVLGDMASRPNFGLNELDFVFSTLVVGSILNFTL 163
Query: 212 VWLPAPTVSLQPPLAVNAGS---IAKFFHNCPDNAFQVALAGTSYSLLQRVGAIMRNGAK 268
++L AP+ A++ GS + F +CP + +++L+ R G ++ G
Sbjct: 164 MYLLAPS-------AISHGSSNLLPGIFRSCPSSHM---FEQGNFTLMNRFGTLVYKGMV 213
Query: 269 LFAVGTSASLIGTGVTNALIKARKAVSKDFEGESEDIPIVSTSVAYGVYMAVSSNLRYQI 328
VG +A L+GT ++N LI RK + FE ++ P + S+ + +M VS+N+RYQ
Sbjct: 214 FATVGLAAGLVGTAISNGLIMLRKKIDPSFETPNKPPPTLLNSLTWATHMGVSANVRYQT 273
Query: 329 LAGV--IEQRMLEPLLHHHKLVLSALCFAVRTGNTFLGSLLWVDYAKWIGIQ 378
L G + ++ L PL+ ++ A+R N LG + +V A+ G Q
Sbjct: 274 LNGAEFLLEKSLPPLVFKTSVI------ALRVVNNVLGGMSFVTLARMTGSQ 319
>AT3G08640.1 | chr3:2622992-2624005 FORWARD LENGTH=338
Length = 337
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 106/229 (46%), Gaps = 15/229 (6%)
Query: 152 GFKERLLADDLFLAKVAMECGVGIFTKTAAEYERRRENFVKELXXXXXXXXXXXXXXXXL 211
G++ R+ AD F KV ME VG+ + R + EL L
Sbjct: 107 GWRSRVAADPQFPFKVLMEEIVGLSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFVL 166
Query: 212 VWLPAPTVSLQPPLAVNAGSIAKFFHNCPDNAFQVALAGTSYSLLQRVGAIMRNGAKLFA 271
+++ APT + ++ ++ F NCP + S++++ R G ++ G +
Sbjct: 167 MYMLAPTAAT----LGSSQTLPGIFRNCPSSHM---FEQGSFTVMNRFGTLVYKGMVFAS 219
Query: 272 VGTSASLIGTGVTNALIKARKAVSKDFEGESEDIPIVSTSVAYGVYMAVSSNLRYQILAG 331
VG +A L+GT ++N LI RK + FE ++ P V S+ + +M VS+N RYQ L G
Sbjct: 220 VGLAAGLVGTAISNGLIMLRKKMDPSFETPNKPPPTVLNSLTWATHMGVSANARYQTLNG 279
Query: 332 V--IEQRMLEPLLHHHKLVLSALCFAVRTGNTFLGSLLWVDYAKWIGIQ 378
+ + ++L PL+ +++ +R N G + +V A+ G Q
Sbjct: 280 IEFLLAKVLPPLVFKTSVIV------LRCANNVAGGMSFVLLARMTGSQ 322
>AT5G24690.1 | chr5:8455783-8458513 REVERSE LENGTH=522
Length = 521
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 117/286 (40%), Gaps = 27/286 (9%)
Query: 103 VLAQLGRKLESLPADLAAAIEGGRVPGEIVQRF----ADLEKSGLFRWLLQFG---GFKE 155
VL + + + LPA L A E G V + +F A + + L G F
Sbjct: 180 VLNEWQKTMMDLPAGLRQAYEMGLVSSAQMVKFLAINARPTTTRMISRALPQGLSRAFVG 239
Query: 156 RLLADDLFLAKVAMECGVGIFTKTAAEYERRRENFVKELXXXXXXXXXXXXXXXXLVWLP 215
R+LAD FL K+ +E + E + R+ +E VWL
Sbjct: 240 RMLADPAFLYKLLLEQAATVGCSVWWEVKNRKNRLKEEWDLALINVLTVSACNAAAVWLL 299
Query: 216 APTVSLQPPLAVNAGSIAKFFHNCPDNAFQVALAGTSYSLLQRVGAIMRNGAKLFAVGTS 275
AP S + + P+N F+++ + L +R ++ A+L +G +
Sbjct: 300 APCRSYGNTFRFD---LQNTLQKLPNNLFEMSYPLREFDLQKRFHSLFYKAAELSILGLA 356
Query: 276 ASLIGTGVTNALIKARKAVSKDFEGESEDIPIVSTS-VAYGVYMAVSSNLRYQILAGVIE 334
A + ++N L +K S +P +ST+ + YG ++ + +NLRYQ+L G
Sbjct: 357 AGTLQGSLSNVLAGKKK------NRVSVTVPSISTNALGYGAFLGIYANLRYQLLCGF-- 408
Query: 335 QRMLEPLLHHHKLVLSALCF--AVRTGNTFLGSLLWVDYAKWIGIQ 378
+R + H ++ AL F A+R N LG W+G++
Sbjct: 409 ERGVS---SHFDVIGVALFFGTALRIMNVQLGE---KSRQVWLGVE 448
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.323 0.138 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,520,627
Number of extensions: 194049
Number of successful extensions: 412
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 397
Number of HSP's successfully gapped: 8
Length of query: 378
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 278
Effective length of database: 8,364,969
Effective search space: 2325461382
Effective search space used: 2325461382
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 112 (47.8 bits)