BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0386900 Os05g0386900|AK073634
(352 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G01220.1 | chr4:513431-515648 REVERSE LENGTH=361 462 e-130
AT4G01770.1 | chr4:764564-766596 FORWARD LENGTH=362 415 e-116
AT4G01750.1 | chr4:756534-758364 FORWARD LENGTH=368 413 e-116
AT1G56550.1 | chr1:21185836-21188070 REVERSE LENGTH=384 406 e-114
AT1G70630.1 | chr1:26632118-26633991 FORWARD LENGTH=538 72 5e-13
AT2G35610.1 | chr2:14947617-14951106 REVERSE LENGTH=645 58 6e-09
AT1G75110.1 | chr1:28194348-28195885 REVERSE LENGTH=429 56 3e-08
AT4G19970.1 | chr4:10818242-10825343 FORWARD LENGTH=716 53 3e-07
AT1G19360.1 | chr1:6690672-6692211 REVERSE LENGTH=429 52 6e-07
>AT4G01220.1 | chr4:513431-515648 REVERSE LENGTH=361
Length = 360
Score = 462 bits (1189), Expect = e-130, Method: Compositional matrix adjust.
Identities = 213/284 (75%), Positives = 243/284 (85%), Gaps = 2/284 (0%)
Query: 69 WRGYTLQEXXXXXXXXGNGTIVLAAVSGPYLPFLSNWLITVRRAGRADQVLVVAEDYDTL 128
WR Y+L + NGT+++ AVS PYLPFL+NWLI+V R DQVLV+AEDY TL
Sbjct: 78 WRDYSLPQAVKFVAK--NGTVIVCAVSYPYLPFLNNWLISVSRQKHQDQVLVIAEDYATL 135
Query: 129 ERINAAWPGHAVLVPPAPDAQVAHKFGSQGFFNFTSRRPRHLLQILELGYSVMYNDVDMV 188
++N WPGHAVL+PPA D+Q AHKFGSQGFFNFT+RRP+HLL+ILELGY+VMYNDVDMV
Sbjct: 136 YKVNEKWPGHAVLIPPALDSQTAHKFGSQGFFNFTARRPQHLLEILELGYNVMYNDVDMV 195
Query: 189 WLADPFPYIVGDHDVYFMDDMTPVKPLDHSHELPPPGKKGRTYICSCMIFLRPTEGAKLL 248
WL DPF Y+ G HD YFMDDMT +KPLDHSH+LPPPGKKGRTYICSCMIFLRPT GAKLL
Sbjct: 196 WLQDPFQYLEGKHDAYFMDDMTAIKPLDHSHDLPPPGKKGRTYICSCMIFLRPTNGAKLL 255
Query: 249 LRKWIEELKEQPWSKKQKANDQPAFNWALNKTAGQVDVYLLPQSAFPTGGLYFKNKTWVK 308
++KWIEEL+ QPWS+ +KANDQP FNWALNKTA QVD+YLL Q+AFPTGGLYFKNKTWVK
Sbjct: 256 MKKWIEELETQPWSRAKKANDQPGFNWALNKTANQVDMYLLSQAAFPTGGLYFKNKTWVK 315
Query: 309 ETKGKHVIIHNNYITGFEKKIKRFRDHGLWLVDEHSDESPLGRI 352
ETKGKH IIHNNYI GFEKKIKRFRD LWLVD+H+ ESPLG++
Sbjct: 316 ETKGKHAIIHNNYIVGFEKKIKRFRDFNLWLVDDHASESPLGKL 359
>AT4G01770.1 | chr4:764564-766596 FORWARD LENGTH=362
Length = 361
Score = 415 bits (1066), Expect = e-116, Method: Compositional matrix adjust.
Identities = 192/286 (67%), Positives = 234/286 (81%), Gaps = 4/286 (1%)
Query: 69 WRGYTLQEXXXXXXXXGNGTIVLAAVSGPYLPFLSNWLITVRRAGRADQVLVVAEDYDTL 128
WR YTL + NGT+++ AVS P+LPFL+NWLI+V R D+VLV+AEDY TL
Sbjct: 77 WRDYTLAQAARFVAK--NGTVIVCAVSSPFLPFLNNWLISVSRQKHQDKVLVIAEDYITL 134
Query: 129 ERINAAWPGHAVLVPPAPDAQVAHKFGSQGFFNFTSRRPRHLLQILELGYSVMYNDVDMV 188
++N WPGHAVL+PPA D++ A FGSQGFFNFT+RRP+HLLQILELGY+VMYNDVDMV
Sbjct: 135 YKVNEKWPGHAVLIPPALDSKTAFSFGSQGFFNFTARRPQHLLQILELGYNVMYNDVDMV 194
Query: 189 WLADPFPYIVGDHDVYFMDDMTPVKPLDHSHELPPPGKKGRTYICSCMIFLRPTEGAKLL 248
WL DPF Y+ G HD YF DDM +KPL+HSH+LP P + G TYICSCMI+LRPT GAKLL
Sbjct: 195 WLQDPFLYLEGSHDAYFTDDMPQIKPLNHSHDLPHPDRNGETYICSCMIYLRPTNGAKLL 254
Query: 249 LRKWIEELKEQPWSK--KQKANDQPAFNWALNKTAGQVDVYLLPQSAFPTGGLYFKNKTW 306
++KW EEL+ Q WS+ + KANDQPAFN ALNKTA QVD+YLL Q AFPTGGLYFKN+ W
Sbjct: 255 MKKWSEELQSQAWSESIRFKANDQPAFNLALNKTAHQVDLYLLSQVAFPTGGLYFKNEAW 314
Query: 307 VKETKGKHVIIHNNYITGFEKKIKRFRDHGLWLVDEHSDESPLGRI 352
V+ETKGKHVI+HNNYI G+++K+KRF+D+GLWLVD+H+ ESPLG++
Sbjct: 315 VQETKGKHVIVHNNYIIGYDRKMKRFQDYGLWLVDDHALESPLGKL 360
>AT4G01750.1 | chr4:756534-758364 FORWARD LENGTH=368
Length = 367
Score = 413 bits (1061), Expect = e-116, Method: Compositional matrix adjust.
Identities = 189/286 (66%), Positives = 233/286 (81%), Gaps = 4/286 (1%)
Query: 69 WRGYTLQEXXXXXXXXGNGTIVLAAVSGPYLPFLSNWLITVRRAGRADQVLVVAEDYDTL 128
WR YTL + NGT+++ AVS P+LPFL+NWLI+V R ++VLV+AEDY TL
Sbjct: 83 WRNYTLAQAAKFVAT--NGTVIVCAVSSPFLPFLNNWLISVSRQKHQEKVLVIAEDYITL 140
Query: 129 ERINAAWPGHAVLVPPAPDAQVAHKFGSQGFFNFTSRRPRHLLQILELGYSVMYNDVDMV 188
++N WPGHAVL+PPA D++ A+ FGSQGFFNFT+RRP+HLLQILELGY+VMYNDVDMV
Sbjct: 141 YKVNEKWPGHAVLIPPALDSKTAYSFGSQGFFNFTARRPQHLLQILELGYNVMYNDVDMV 200
Query: 189 WLADPFPYIVGDHDVYFMDDMTPVKPLDHSHELPPPGKKGRTYICSCMIFLRPTEGAKLL 248
WL DPF Y+ G HD YF DDM +KPL+HSH+LP P + G TYICSCMI+LRPT GAKLL
Sbjct: 201 WLQDPFQYLEGSHDAYFTDDMPQIKPLNHSHDLPAPDQNGETYICSCMIYLRPTNGAKLL 260
Query: 249 LRKWIEELKEQPWSK--KQKANDQPAFNWALNKTAGQVDVYLLPQSAFPTGGLYFKNKTW 306
++KW EEL+ Q WS+ + KANDQPAFN ALNKTA QVD+YLL Q AFPTGGLYF + W
Sbjct: 261 MKKWSEELQSQAWSESIRFKANDQPAFNLALNKTAHQVDLYLLSQVAFPTGGLYFNDAAW 320
Query: 307 VKETKGKHVIIHNNYITGFEKKIKRFRDHGLWLVDEHSDESPLGRI 352
VKETKGKHVI+HNNYI G+++K++RF+D+GLWLVD+H+ ESPLG++
Sbjct: 321 VKETKGKHVIVHNNYIIGYDRKMRRFQDYGLWLVDDHALESPLGKL 366
>AT1G56550.1 | chr1:21185836-21188070 REVERSE LENGTH=384
Length = 383
Score = 406 bits (1043), Expect = e-114, Method: Compositional matrix adjust.
Identities = 184/286 (64%), Positives = 230/286 (80%), Gaps = 4/286 (1%)
Query: 69 WRGYTLQEXXXXXXXXGNGTIVLAAVSGPYLPFLSNWLITVRRAGRADQVLVVAEDYDTL 128
WR Y+L + N T+++ AVS P+LPFL+NWLI++ R ++VLV+AEDY TL
Sbjct: 67 WRDYSLAQAVKFVAK--NETVIVCAVSYPFLPFLNNWLISISRQKHQEKVLVIAEDYATL 124
Query: 129 ERINAAWPGHAVLVPPAPDAQVAHKFGSQGFFNFTSRRPRHLLQILELGYSVMYNDVDMV 188
++N WPGHAVL+PPA D Q AHKFGSQGFFN TSRRP+HLL ILELGY+VMYNDVDMV
Sbjct: 125 YKVNEKWPGHAVLIPPALDPQSAHKFGSQGFFNLTSRRPQHLLNILELGYNVMYNDVDMV 184
Query: 189 WLADPFPYIVGDHDVYFMDDMTPVKPLDHSHELPPPGKKGRTYICSCMIFLRPTEGAKLL 248
WL DPF Y+ G +D YFMDDM +KPL+HSH+LPP + G TY+CSCMIFLR T+G KLL
Sbjct: 185 WLQDPFDYLQGSYDAYFMDDMIAIKPLNHSHDLPPLSRSGVTYVCSCMIFLRSTDGGKLL 244
Query: 249 LRKWIEELKEQPWSKKQ--KANDQPAFNWALNKTAGQVDVYLLPQSAFPTGGLYFKNKTW 306
++ W+EE++ QPW+ Q K +DQPAFN AL+KTA QV VYLLPQSAFP+GGLYF+N+TW
Sbjct: 245 MKTWVEEIQAQPWNNTQAKKPHDQPAFNRALHKTANQVKVYLLPQSAFPSGGLYFRNETW 304
Query: 307 VKETKGKHVIIHNNYITGFEKKIKRFRDHGLWLVDEHSDESPLGRI 352
V ET+GKHVI+HNNYI G++KK+KRF+D LWLVD+H+ ESPLG++
Sbjct: 305 VNETRGKHVIVHNNYIIGYDKKMKRFQDFSLWLVDDHALESPLGKL 350
>AT1G70630.1 | chr1:26632118-26633991 FORWARD LENGTH=538
Length = 537
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 115/270 (42%), Gaps = 25/270 (9%)
Query: 86 NGTIVLAAVSGPYLPFLSNWLITVRRAGRADQVLVVAEDYDTLERINAAWPGHAVLVPPA 145
N T+VL+ Y L +W+ +RR + LV A D +T + + G V P
Sbjct: 272 NRTVVLSVAGYSYKDMLMSWVCRLRRL-KVPNFLVCALDDETYQF--SILQGLPVFFDPY 328
Query: 146 PDAQVAHK---FGSQGFFNFTSRRPRHLLQILELGYSVMYNDVDMVWLADPFPYIVGDHD 202
++ FGS+ F T + R +L+IL+LGY+V+ +DVD+ W +P P +
Sbjct: 329 APKNISFNDCHFGSKCFQRVTKVKSRTVLKILKLGYNVLLSDVDVYWFRNPLPLLQS--- 385
Query: 203 VYFMDDMTPVKPLDHSHELPPPGKKGRTYICSCMIFLR---PTEGA--KLLLRKWIEELK 257
F + + D + P + R + S F R PT A K++ L
Sbjct: 386 --FGPSVLAAQS-DEYNTTAPINRPRR--LNSGFYFARSDSPTIAAMEKVVKHAATSGLS 440
Query: 258 EQPWSKKQKANDQPAFNWALNKTA---GQVDVYLLPQSAFPTGG---LYFKNKTWVKETK 311
EQP + A+ ++ + V L + FP G L+ K + K
Sbjct: 441 EQPSFYDTLCGEGGAYRLGDDRCVEPETNLTVQFLDRELFPNGAYGDLWLKEDVRAECEK 500
Query: 312 GKHVIIHNNYITGFEKKIKRFRDHGLWLVD 341
++HNN+I+G KK++R GLW D
Sbjct: 501 KHCFVLHNNWISGRLKKLERQMMKGLWEYD 530
>AT2G35610.1 | chr2:14947617-14951106 REVERSE LENGTH=645
Length = 644
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 116/285 (40%), Gaps = 30/285 (10%)
Query: 86 NGTIVLAAVSGPYLPFLSNWLITVRRAGRADQVLVVAEDYDTLERINAAWPGHAVLVPPA 145
+ I++ + ++ F+ W+ + ++ +LV A D LE + W G V +
Sbjct: 131 DNVIIVTFGNYAFMDFILTWVKHLTDLDLSN-ILVGAMDTKLLEAL--YWKGVPVFDMGS 187
Query: 146 PDAQVAHKFGSQGFFNFTSRRPRHLLQILELGYSVMYNDVDMVWLADPFPYIVG--DHDV 203
+ V +GS F + + +L GY ++ D DMVWL +P PY+ D DV
Sbjct: 188 HMSTVDVGWGSPTFHKMGREKVILIDSVLPFGYELLMCDTDMVWLKNPMPYLARFPDADV 247
Query: 204 YFMDDMTPVKPLDHSHELPPPGKKGRTYICSCMIFLRPTEGAKLLLRKWIEELKEQPWSK 263
D +D S ++ + G Y + RPTE AK L ++W E L
Sbjct: 248 LTSSDQVVPTVIDDSLDI--WQQVGAAYNIG-IFHWRPTESAKKLAKEWKEILLAD---- 300
Query: 264 KQKANDQPAFNWALNKTA---------------GQVDVYLLPQSAFPTGGLYFKNKTWVK 308
K DQ FN + + G + V +LP S F +G YF + +
Sbjct: 301 -DKVWDQNGFNEIVRRQLGPSVEGDSGLFYAYDGNLKVGILPASIFCSGHTYFVQAMY-Q 358
Query: 309 ETKGKHVIIHNNY-ITGFEKKIKRFRDHGLWLVDEHSDESPLGRI 352
+ + + +H + G E K R R+ ++ +SP G I
Sbjct: 359 QLRLEPYAVHTTFQYAGTEGKRHRLREGMVFYDPPEYYDSPGGFI 403
>AT1G75110.1 | chr1:28194348-28195885 REVERSE LENGTH=429
Length = 428
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 103/253 (40%), Gaps = 28/253 (11%)
Query: 86 NGTIVLAAVSGPYLPFLSNWLITVRRAGRADQVLVVAEDYDTLERINAAWPGHAVLVPPA 145
N I++ + P L + +V+R G L+VA D D++E V
Sbjct: 156 NKEIIVVLANSNVKPMLELQIASVKRVG-IQNYLIVALD-DSMESF--CESKEVVFYKRD 211
Query: 146 PDAQVAHKFGSQGFFNFTSRRPRHLLQILELGYSVMYNDVDMVWLADPFPYIVGDHDVYF 205
PD V S G + + R L + L+LGYSV+ +DVD+V+L +PF ++ D DV
Sbjct: 212 PDKAVDMVGKSGGNHAVSGLKFRVLREFLQLGYSVLLSDVDIVFLQNPFSHLHRDSDVES 271
Query: 206 MD---DMTPVKPLDHSHELPPPG-----KKGRTYIC-SCMIFLRPTEGAKLLLRKWIEEL 256
M D + + P G R ++ S +LRPT + LL + + L
Sbjct: 272 MSDGHDNNTAYGFNDVFDEPSMGWARYAHTMRIWVFNSGFFYLRPTIPSIDLLDRVADTL 331
Query: 257 -KEQPWSKKQKANDQPAFNWAL------NKTAGQVDVYLLPQSAFPTGGLYFKNKTWVKE 309
K + W DQ FN L T ++ F + FK +E
Sbjct: 332 SKSEAW-------DQAVFNEQLFYPSHPGYTGLHASKRVMDMYEFMNSKVLFKTVRKNQE 384
Query: 310 TKG-KHVIIHNNY 321
K K VI+H NY
Sbjct: 385 LKKLKPVIVHLNY 397
>AT4G19970.1 | chr4:10818242-10825343 FORWARD LENGTH=716
Length = 715
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 90/221 (40%), Gaps = 27/221 (12%)
Query: 117 QVLVVAEDYDTLERINAAWPGHAVLVPPAPDAQVA--HKFGSQGFFNFTSRRPRHLLQIL 174
V+ V D ++ P H L+ Q++ ++F + G+ RR L Q++
Sbjct: 151 HVIAVCLDIKAYDQCLKVHP-HCYLINATDSDQLSGPNRFMTPGYLKLIWRRMDLLRQVI 209
Query: 175 ELGYSVMYNDVDMVWLADPFPYIVGDHDVYFMDDMTPVKPLDHSHELPPPGKKGRTYICS 234
LGY+ ++ D D++WL DPFP D D D +P D + + G TY+
Sbjct: 210 GLGYNFIFTDADILWLRDPFPRFFPDADFQITCDDYNGRPSDKKNHV----NSGFTYV-- 263
Query: 235 CMIFLRPTEGAKLLLRKWIEELKEQPWSKKQKANDQPAFNWALNKTAGQVDVYLLPQSAF 294
+ + WI ++ P +DQ FN+ N V+ + F
Sbjct: 264 -----KANNKTSKFYKYWIRSSRKFP-----GKHDQDVFNFIKNDL--HVEKLGIKMRFF 311
Query: 295 PTGGLYFKNKTWVKETKGKHVI--IHNNYITGFEKKIKRFR 333
T +YF + + ++ +V+ +H N G + K+ +
Sbjct: 312 DT--VYFGG--FCQPSRDINVVNTMHANCCIGLDNKVNNLK 348
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 44/102 (43%)
Query: 101 FLSNWLITVRRAGRADQVLVVAEDYDTLERINAAWPGHAVLVPPAPDAQVAHKFGSQGFF 160
FL ++ I V+VV D R + P L D F + +
Sbjct: 475 FLESFRIGQGTKKLLQHVVVVCLDSKAFARCSQLHPNCYYLKTTGTDFSGEKLFATPDYL 534
Query: 161 NFTSRRPRHLLQILELGYSVMYNDVDMVWLADPFPYIVGDHD 202
RR L Q+LE+GY+ ++ D D++WL DPFP + D D
Sbjct: 535 KMMWRRIELLTQVLEMGYNFIFTDADIMWLRDPFPRLYPDGD 576
>AT1G19360.1 | chr1:6690672-6692211 REVERSE LENGTH=429
Length = 428
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 101/250 (40%), Gaps = 27/250 (10%)
Query: 89 IVLAAVSGPYLPFLSNWLITVRRAGRADQVLVVAEDYDTLERINAAWPGHAVLVPPAPDA 148
+++A + L + +++R G + ++V +DY +E N PD
Sbjct: 158 VIVALANANVKAMLEVQIASIKRVGITNYLVVALDDY--IE--NLCKENDVAYYKRDPDK 213
Query: 149 QVAHKFGSQGFFNFTSRRPRHLLQILELGYSVMYNDVDMVWLADPFPYIVGDHDVYFMD- 207
V + G + + R L + L+LGY V+ +DVD+V+L +PF ++ D DV M
Sbjct: 214 DVDTVGKTGGNHAVSGLKFRVLREFLQLGYGVLLSDVDIVFLQNPFSHLYRDSDVESMSD 273
Query: 208 --DMTPVKPLDHSHELPPPG-----KKGRTYIC-SCMIFLRPTEGAKLLLRKWIEELKEQ 259
D + + P G R ++ S +LRPT + LL + + L
Sbjct: 274 GHDNHTAYGFNDVFDEPAMGWARYAHTMRIWVFNSGFFYLRPTIPSIELLDRVADRL--- 330
Query: 260 PWSKKQKANDQPAFNWAL------NKTAGQVDVYLLPQSAFPTGGLYFKN--KTWVKETK 311
K K DQ FN L TA ++ F + FK K + K
Sbjct: 331 ---SKAKVWDQAVFNEELFYPSHPEYTALHASKRVMDMYEFMNSKVLFKTVRKNHELKKK 387
Query: 312 GKHVIIHNNY 321
K VI+H NY
Sbjct: 388 VKPVIVHVNY 397
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.139 0.454
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,288,306
Number of extensions: 314884
Number of successful extensions: 579
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 572
Number of HSP's successfully gapped: 10
Length of query: 352
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 252
Effective length of database: 8,364,969
Effective search space: 2107972188
Effective search space used: 2107972188
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 112 (47.8 bits)