BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0375600 Os05g0375600|Os05g0375600
(407 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G57190.1 | chr3:21166468-21168198 FORWARD LENGTH=407 301 4e-82
AT5G36170.1 | chr5:14236083-14237974 REVERSE LENGTH=457 219 2e-57
AT1G56350.1 | chr1:21094840-21097826 FORWARD LENGTH=483 107 1e-23
AT2G47020.1 | chr2:19320090-19322279 REVERSE LENGTH=414 65 6e-11
AT3G62910.1 | chr3:23257661-23260386 REVERSE LENGTH=423 54 2e-07
>AT3G57190.1 | chr3:21166468-21168198 FORWARD LENGTH=407
Length = 406
Score = 301 bits (771), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 171/367 (46%), Positives = 234/367 (63%), Gaps = 19/367 (5%)
Query: 50 YKELGLYSLKKRIEDAVVRVETTASSALEMEEARRIRQEEVLRGRNLWDNPAKSHETLSA 109
YK+LGL+SLKK+I+D V++ E A ALE+EE + I+QEE +R +LWD+PAKS E L
Sbjct: 42 YKQLGLFSLKKKIKDVVLKAEMFAPDALELEEEQWIKQEETMRYFDLWDDPAKSDEILLK 101
Query: 110 LADAIRVVDHLKDLRYKAEEAKLISQLSEMDVINVELFKQAYKTSVDATEFLDRYQMYKL 169
LAD + VD LKDL+YKAEEAKLI QL EMD I+ LF+QAY +S+D + L Y+M KL
Sbjct: 102 LADRAKAVDSLKDLKYKAEEAKLIIQLGEMDAIDYSLFEQAYDSSLDVSRSLHHYEMSKL 161
Query: 170 LKGPYDKEGACIIVTAGS--------DERIFCMYSSWARKQGCKDGLVEKITSTSGR--V 219
L+ YD EGAC+I+ +GS E++ MY WA + G + EK + S + V
Sbjct: 162 LRDQYDAEGACMIIKSGSPGAKSQIWTEQVVSMYIKWAERLGQNARVAEKCSLLSNKSGV 221
Query: 220 WTAAIEIESEYMFGTLTGEKGTHRMIYPSVDNAGTYEATSARVDIIPLFLDRPVNLHLDE 279
+A IE E E+ +G L GE+G HR+I S N E SA VDIIPLFL + + E
Sbjct: 222 SSATIEFEFEFAYGYLLGERGVHRLIISSTSN----EECSATVDIIPLFLRASPDFEVKE 277
Query: 280 NDLEIS-PSPSDHKRRDHRNSAIRVQHIRTGVTAESSGERSYFANKMKAISRLKAKLLVI 338
DL +S P+ DHK ++ + + HI +GVT +SSGER+ FAN++KA++RLKAKLLVI
Sbjct: 278 GDLIVSYPAKEDHKIAEN---MVCIHHIPSGVTLQSSGERNRFANRIKALNRLKAKLLVI 334
Query: 339 SRELRSSNLKTIKRQTVEELYSRETRRYKFGPQKLVHDLNTGLQLSELNSVLDGDIDPFI 398
++E + S++ I + + E ETR Y K+V D TGL++ +L SVLDG+I P +
Sbjct: 335 AKEQKVSDVNKIDSKNILE-PREETRSYVSKGHKMVVDRKTGLEILDLKSVLDGNIGPLL 393
Query: 399 RGRIVSR 405
I R
Sbjct: 394 GAHISMR 400
>AT5G36170.1 | chr5:14236083-14237974 REVERSE LENGTH=457
Length = 456
Score = 219 bits (559), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 130/360 (36%), Positives = 207/360 (57%), Gaps = 14/360 (3%)
Query: 55 LYSLKKRIEDAVVRVETT-ASSALEMEEARRIRQEEVLRGRNLWDNPAKSHETLSALADA 113
Y+L+K +E A RVE AS+ L+ E E + WD+ K+ ETLS+L D
Sbjct: 81 FYTLRKDVEIASARVEEIRASANLQQLEQEITNLESKATDTSFWDDRTKAQETLSSLNDL 140
Query: 114 IRVVDHLKDLRYKAEEAKLISQLSE-MDVINVELFKQAYKTSVDATEFLDRYQMYKLLKG 172
+ L + + E+A+ I +L+E MD +V L ++A + + LD++++ +LL G
Sbjct: 141 KDRMRLLSEFKTMVEDAETIVKLTEEMDSTDVSLLEEAMGIIKELNKSLDKFELTQLLSG 200
Query: 173 PYDKEGACIIVTAGSD--------ERIFCMYSSWARKQGCKDGLVEKITSTSGRVWTAAI 224
PYDKEGA + +TAG+ + + MY W KQ K +VE + +A +
Sbjct: 201 PYDKEGAVVYITAGAGGTDAQDWADMLLRMYMRWGEKQRYKTKVVEMSNGEEAGIKSATL 260
Query: 225 EIESEYMFGTLTGEKGTHRMIYPSVDNA-GTYEATSARVDIIPLFLDRPVNLHLDENDLE 283
EIE Y +G ++GEKGTHR++ S N+ G + + + V+++PL + V + + E DL+
Sbjct: 261 EIEGRYAYGYISGEKGTHRIVRQSPFNSKGLRQTSFSGVEVMPLLPEEAVGIEIPEEDLD 320
Query: 284 ISPSPSDHKRRDHRN---SAIRVQHIRTGVTAESSGERSYFANKMKAISRLKAKLLVISR 340
IS + + K + N +A+R+ HI TGV + ERS ANK +A+ RLKAKL+VI+
Sbjct: 321 ISFTRAGGKGGQNVNKVETAVRITHIPTGVAVRCTEERSQLANKTRALIRLKAKLMVIAE 380
Query: 341 ELRSSNLKTIKRQTVEELYSRETRRYKFGPQKLVHDLNTGLQLSELNSVLDGDIDPFIRG 400
E R++ +K I+ V+ + ++ R Y F P KLV D+ TG + S++ SV+DGD+DPFI+
Sbjct: 381 EQRATEIKEIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDITSVMDGDLDPFIKA 440
>AT1G56350.1 | chr1:21094840-21097826 FORWARD LENGTH=483
Length = 482
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 156/340 (45%), Gaps = 37/340 (10%)
Query: 91 LRGRNLWDNP------AKSHETLSALADAI-----RVVDHLKDLRYKAEEAKLISQLSEM 139
L +LWD+P ++ H +L+ + +++H+ L+ EE
Sbjct: 149 LNKSDLWDDPTHAGKISREHGSLTGKMKGVMTFERELLEHIDMLKLAKEEN--------- 199
Query: 140 DVINVELFKQAYKTSVDATEFLDRYQMYKLLKGPYDKEGACIIVTAGSD--------ERI 191
+ EL + K +D ++ LL D I V AG+ +
Sbjct: 200 ---DSELESETLKALIDMRRVSKEKELEALLSADNDPCSCYIEVQAGAGGTESNDWAAMV 256
Query: 192 FCMYSSWARKQGCKDGLVEKITSTSGRVWTAAIEIESEYMFGTLTGEKGTHRMIYPSVDN 251
MY +WA+++ +V++ + A I++ EY +G E G HR++ S +
Sbjct: 257 MEMYKTWAQRRKFSVTVVDEAPGEIAGIKRATIKVNGEYAYGYAKAEVGVHRLVRISPFD 316
Query: 252 AGTYEATS-ARVDIIPLFLDRPVNLHLDENDLEISPSPSDHKRRDHRN---SAIRVQHIR 307
+G TS A V +IP+ D + ++++DL I S H N SA+R+ HI
Sbjct: 317 SGKRRHTSFAAVAVIPILGDGSTRVEINDSDLRIERFRSGGAGGQHANTTDSAVRIVHIP 376
Query: 308 TGVTAESSGERSYFANKMKAISRLKAKLLVISRELRSSNLKTIKRQTVEEL-YSRETRRY 366
TG+TA ERS +NK A++ L+++L + R + + Q++ E+ + + R Y
Sbjct: 377 TGITATCQNERSQHSNKASAMAVLQSRLDQLEMA-RQTAMNAQHTQSLTEISWGNQIRTY 435
Query: 367 KFGPQKLVHDLNTGLQLSELNSVLDGDIDPFIRGRIVSRL 406
P ++V DL T ++S+ +SVL+GD+D FI + S L
Sbjct: 436 VLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSFLSSSL 475
>AT2G47020.1 | chr2:19320090-19322279 REVERSE LENGTH=414
Length = 413
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 97/214 (45%), Gaps = 9/214 (4%)
Query: 191 IFCMYSSWARKQGCKDGLVEKITSTSGRVWTAAIEIESEYMFGTLTGEKGTHRMI-YPSV 249
IF MY +++K+G K +V+ S A+ I ++G L E G HR+ P
Sbjct: 184 IFRMYERYSQKKGWKFDIVDITESDMKGYKEASAAICGASVYGKLKFESGIHRVQRIPIT 243
Query: 250 DNAGTYEATSARVDIIPLFLDRPVNLHLDENDLEISPSPSDHKRRDH---RNSAIRVQHI 306
+ +G ++ V I+P + V++ L DL I S H NSA+R+ H+
Sbjct: 244 EKSGRIHTSAISVAILPQADE--VDVQLRNEDLRIDTYRSGGSGGQHANTTNSAVRIIHL 301
Query: 307 RTGVTAESSGERSYFANKMKAISRLKAKLLVISR-ELRSSNLKTIKRQTVEELYSRETRR 365
TG+ ERS N+ KA+ L A+L I R ++SS K Q S R
Sbjct: 302 PTGMMVSIQDERSQHMNRAKALKVLCARLYEIERLRIQSSRSKLRSDQIGSGDRSGRIRT 361
Query: 366 YKFGPQKLVHDLNTGLQLSELNSVLDG-DIDPFI 398
Y F PQ V D G+ + ++ G ++D FI
Sbjct: 362 YNF-PQGRVTDHRVGITHHAIEDMMQGENLDMFI 394
>AT3G62910.1 | chr3:23257661-23260386 REVERSE LENGTH=423
Length = 422
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 132/311 (42%), Gaps = 20/311 (6%)
Query: 105 ETLSALADAIRVVDHLKDLRYKAEEAKLISQLSEMDVINVELFKQAYKTSVDATEFLDRY 164
+++S L + + V KD + E+K++++ + D E+ + E L++
Sbjct: 92 QSMSELDEVVTVFRRFKDCEKQLLESKVLAKEAGDDEDMAEMIGSEINSLTKEIEELEKQ 151
Query: 165 QMYKLLKG-PYDKEGACIIVTAGS--DER------IFCMYSSWARKQGCKDGLVEKITST 215
LL P D + V AG+ DE + MY ++ + K +V +
Sbjct: 152 LKVLLLPSDPLDARNILLEVRAGTGGDEAAIWTGDLVRMYQRYSERSSWKFSMVSCSEAE 211
Query: 216 SGRVWTAAIEIESEYMFGTLTGEKGTHRMI-YPSVDNAGTYEATSARVDIIPLFLDRPVN 274
G T +EI+ ++ L E G HR+ P + G ++A V I+P + V
Sbjct: 212 HGGYKTCVMEIKGNRVYSKLKYESGVHRVQRVPQTETQGRVHTSTATVAIMPEADE--VE 269
Query: 275 LHLDENDLEISPSPSDHKRRDHRN---SAIRVQHIRTGVTAESSGERSYFANKMKAISRL 331
+ +D D+E++ + S + N +AI + H +G+ + ER+ NK +A L
Sbjct: 270 VVIDPKDIELTSARSGGAGGQNVNKVETAIDLFHKPSGIRIFCTEERTQIRNKARAFQLL 329
Query: 332 KAKLLVIS-RELRSSNLKTIKRQTVEELYSRETRRYKFGPQKLV-HDLNTGLQLSELNSV 389
+AKL I RE + K Q S + R Y + ++ H L L+ +
Sbjct: 330 RAKLYEIKVREQQEKIRNERKSQVGTGARSEKIRTYNYKDSRVTDHRLKMNFALT---TF 386
Query: 390 LDGDIDPFIRG 400
LDG ++ ++
Sbjct: 387 LDGALEDAVQA 397
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.316 0.132 0.369
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,602,628
Number of extensions: 307305
Number of successful extensions: 1009
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 995
Number of HSP's successfully gapped: 5
Length of query: 407
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 306
Effective length of database: 8,337,553
Effective search space: 2551291218
Effective search space used: 2551291218
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 113 (48.1 bits)