BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0364600 Os05g0364600|AK071503
(294 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G02840.1 | chr1:626918-629583 FORWARD LENGTH=304 269 1e-72
AT1G09140.1 | chr1:2942887-2945818 REVERSE LENGTH=269 262 2e-70
AT4G02430.2 | chr4:1069186-1071313 FORWARD LENGTH=279 254 5e-68
AT3G49430.1 | chr3:18332668-18334829 FORWARD LENGTH=301 240 5e-64
AT3G53500.2 | chr3:19834557-19836507 REVERSE LENGTH=285 72 3e-13
AT2G37340.1 | chr2:15670372-15672331 REVERSE LENGTH=291 70 2e-12
AT4G31580.1 | chr4:15306983-15308064 FORWARD LENGTH=201 61 8e-10
AT3G61860.1 | chr3:22900311-22902159 REVERSE LENGTH=265 59 2e-09
AT2G24590.1 | chr2:10449837-10450860 FORWARD LENGTH=197 59 3e-09
AT4G25500.1 | chr4:13025168-13027243 FORWARD LENGTH=351 58 6e-09
AT5G52040.2 | chr5:21131081-21133318 FORWARD LENGTH=358 58 7e-09
AT1G23860.1 | chr1:8428091-8429164 REVERSE LENGTH=188 57 9e-09
AT2G46610.1 | chr2:19136769-19138492 REVERSE LENGTH=251 57 1e-08
AT4G12640.1 | chr4:7462697-7467630 FORWARD LENGTH=824 55 3e-08
AT3G11400.2 | chr3:3578536-3580366 FORWARD LENGTH=322 50 2e-06
AT1G60650.1 | chr1:22340089-22342148 FORWARD LENGTH=293 49 2e-06
AT1G73530.1 | chr1:27643801-27645386 REVERSE LENGTH=182 49 3e-06
AT3G52660.1 | chr3:19522598-19524735 FORWARD LENGTH=472 49 4e-06
AT4G24770.1 | chr4:12766223-12767952 REVERSE LENGTH=330 48 6e-06
>AT1G02840.1 | chr1:626918-629583 FORWARD LENGTH=304
Length = 303
Score = 269 bits (687), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 131/199 (65%), Positives = 149/199 (74%), Gaps = 11/199 (5%)
Query: 1 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAQD 60
MS R+SRT+YVGNLPGDIREREVEDLF KYG +V IDLK+PPRPPGYAFVEF+D RDA+D
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60
Query: 61 AIYGRHGYDFDGHRLRVELAHGGXXXXXXXXXXXXXXXXXXX-----------XXXTDYR 109
AI+GR GYDFDGHRLRVELAHGG +++R
Sbjct: 61 AIHGRDGYDFDGHRLRVELAHGGRRSSDDTRGSFNGGGRGGGRGRGDGGSRGPSRRSEFR 120
Query: 110 VMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREGGATIGIVDYTNYEDMKQAIRKLDDSE 169
V+VTGLPSSASWQDLKDHMR+ GDVCFS VYR+ T G+VDYT YEDMK A++KLDD+E
Sbjct: 121 VLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYALKKLDDTE 180
Query: 170 FRNAFSRAYIRVREYDSAK 188
FRNAFS Y+RVREYDS K
Sbjct: 181 FRNAFSNGYVRVREYDSRK 199
>AT1G09140.1 | chr1:2942887-2945818 REVERSE LENGTH=269
Length = 268
Score = 262 bits (669), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 133/187 (71%), Positives = 147/187 (78%), Gaps = 1/187 (0%)
Query: 1 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAQD 60
MS R +RTIYVGNLPGDIR+ EVEDLFYKYG IVDIDLKIPPRPPGYAFVEFEDPRDA D
Sbjct: 1 MSSRWNRTIYVGNLPGDIRKCEVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDPRDADD 60
Query: 61 AIYGRHGYDFDGHRLRVELAHGGXXXX-XXXXXXXXXXXXXXXXXXTDYRVMVTGLPSSA 119
AIYGR GYDFDG RLRVE+AHGG +DYRV+VTGLP SA
Sbjct: 61 AIYGRDGYDFDGCRLRVEIAHGGRRFSPSVDRYSSSYSASRAPSRRSDYRVLVTGLPPSA 120
Query: 120 SWQDLKDHMRRAGDVCFSDVYREGGATIGIVDYTNYEDMKQAIRKLDDSEFRNAFSRAYI 179
SWQDLKDHMR+AGDVCFS+V+ + G+VDY+NY+DMK AIRKLD +EFRNAFS AYI
Sbjct: 121 SWQDLKDHMRKAGDVCFSEVFPDRKGMSGVVDYSNYDDMKYAIRKLDATEFRNAFSSAYI 180
Query: 180 RVREYDS 186
RVREY+S
Sbjct: 181 RVREYES 187
>AT4G02430.2 | chr4:1069186-1071313 FORWARD LENGTH=279
Length = 278
Score = 254 bits (648), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 131/197 (66%), Positives = 144/197 (73%), Gaps = 15/197 (7%)
Query: 1 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAQD 60
MS R+SRTIYVGNLPGDIREREVEDLF KYG +V IDLKIPPRPPGYAFVEFED RDA D
Sbjct: 1 MSSRSSRTIYVGNLPGDIREREVEDLFSKYGPVVQIDLKIPPRPPGYAFVEFEDARDADD 60
Query: 61 AIYGRHGYDFDGHRLRVELAHGGXXXXXXXXXXXXXXXXXXXXXX------------TDY 108
AIYGR GYDFDGH LRVELAHGG ++Y
Sbjct: 61 AIYGRDGYDFDGHHLRVELAHGGRRSSHDARGSYSGRGRGGRGGGDGGGRERGPSRRSEY 120
Query: 109 RVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREGGATIGIVDYTNYEDMKQAIRKLDDS 168
RV+V+GLPSSASWQDLKDHMR+ G+VCFS V+R+G T GIVDYT+YEDMK A LDD+
Sbjct: 121 RVVVSGLPSSASWQDLKDHMRKGGEVCFSQVFRDGRGTTGIVDYTSYEDMKYA---LDDT 177
Query: 169 EFRNAFSRAYIRVREYD 185
EFRNAFS Y+RVREYD
Sbjct: 178 EFRNAFSHEYVRVREYD 194
>AT3G49430.1 | chr3:18332668-18334829 FORWARD LENGTH=301
Length = 300
Score = 240 bits (613), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 119/199 (59%), Positives = 143/199 (71%), Gaps = 14/199 (7%)
Query: 1 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAQD 60
MS R SR+IYVGNLPGDIRE E+ED+FYKYGRIVDI+LK+PPRPP Y FVEFE RDA+D
Sbjct: 1 MSGRFSRSIYVGNLPGDIREHEIEDIFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAED 60
Query: 61 AIYGRHGYDFDGHRLRVELAHGGXXXXXX--------------XXXXXXXXXXXXXXXXT 106
AI GR GY+ DG RLRVELAHGG +
Sbjct: 61 AIKGRDGYNLDGCRLRVELAHGGRGQSSSDRRGGYGGGGSGYGGGGGGGGSARFGVSRHS 120
Query: 107 DYRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREGGATIGIVDYTNYEDMKQAIRKLD 166
++RV+V GLPSSASWQDLKDHMR+AGDVCF++V R+ T G+VDYTNY+DMK AIRKLD
Sbjct: 121 EFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRKLD 180
Query: 167 DSEFRNAFSRAYIRVREYD 185
D+EFRN ++R +IRV++Y+
Sbjct: 181 DTEFRNPWARGFIRVKKYE 199
>AT3G53500.2 | chr3:19834557-19836507 REVERSE LENGTH=285
Length = 284
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 47/74 (63%), Gaps = 5/74 (6%)
Query: 9 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAQDAIYGRHGY 68
+YVG L R R++E LF +YGR+ D+D+K YAFVEF DPRDA DA Y G
Sbjct: 13 LYVGRLSSRTRTRDLERLFSRYGRVRDVDMKR-----DYAFVEFSDPRDADDARYYLDGR 67
Query: 69 DFDGHRLRVELAHG 82
DFDG R+ VE + G
Sbjct: 68 DFDGSRITVEASRG 81
>AT2G37340.1 | chr2:15670372-15672331 REVERSE LENGTH=291
Length = 290
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 47/74 (63%), Gaps = 5/74 (6%)
Query: 9 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAQDAIYGRHGY 68
+YVG L R R++E LF +YGR+ D+D+K YAFVEF DPRDA DA + G
Sbjct: 13 LYVGRLSSRTRTRDLERLFSRYGRVRDVDMKR-----DYAFVEFGDPRDADDARHYLDGR 67
Query: 69 DFDGHRLRVELAHG 82
DFDG R+ VE + G
Sbjct: 68 DFDGSRITVEFSRG 81
>AT4G31580.1 | chr4:15306983-15308064 FORWARD LENGTH=201
Length = 200
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 49/76 (64%), Gaps = 12/76 (15%)
Query: 9 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAQDAIY---GR 65
+YVGNL + ERE+ED F +G + + + RPPGYAF++FEDPRDA+DAI G+
Sbjct: 4 VYVGNLDPRVTERELEDEFRAFGVVRSV--WVARRPPGYAFLDFEDPRDARDAIRALDGK 61
Query: 66 HGYDFDGHRLRVELAH 81
+G+ RVE +H
Sbjct: 62 NGW-------RVEQSH 70
>AT3G61860.1 | chr3:22900311-22902159 REVERSE LENGTH=265
Length = 264
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 47/78 (60%), Gaps = 7/78 (8%)
Query: 7 RTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAQDAIYGRH 66
R ++VGN + R+ ++E LF KYGR+ +D+K GYAFV FED RDA+DAI
Sbjct: 2 RPVFVGNFEYETRQSDLERLFDKYGRVDRVDMKS-----GYAFVYFEDERDAEDAIRKLD 56
Query: 67 GYDF--DGHRLRVELAHG 82
+ F + RL VE A G
Sbjct: 57 NFPFGYEKRRLSVEWAKG 74
>AT2G24590.1 | chr2:10449837-10450860 FORWARD LENGTH=197
Length = 196
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 48/76 (63%), Gaps = 12/76 (15%)
Query: 9 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAQDAIY---GR 65
+YVGNL + ERE+ED F +G I + + RPPGYAF++FED RDA+DAI G+
Sbjct: 4 VYVGNLDPRVTERELEDEFRSFGVIRSV--WVARRPPGYAFLDFEDSRDARDAIREVDGK 61
Query: 66 HGYDFDGHRLRVELAH 81
+G+ RVE +H
Sbjct: 62 NGW-------RVEQSH 70
>AT4G25500.1 | chr4:13025168-13027243 FORWARD LENGTH=351
Length = 350
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 45/76 (59%), Gaps = 7/76 (9%)
Query: 7 RTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAQDAIYGRH 66
+ ++ GN D RE ++E LF KYG++ +D+K G+AFV ED RDA+DAI
Sbjct: 2 KPVFCGNFEYDAREGDLERLFRKYGKVERVDMKA-----GFAFVYMEDERDAEDAIRALD 56
Query: 67 GYDF--DGHRLRVELA 80
++F G RLRVE
Sbjct: 57 RFEFGRKGRRLRVEWT 72
>AT5G52040.2 | chr5:21131081-21133318 FORWARD LENGTH=358
Length = 357
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 44/76 (57%), Gaps = 7/76 (9%)
Query: 7 RTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAQDAIYG-- 64
+ ++ GN D RE ++E LF KYG++ +D+K G+AFV ED RDA+DAI
Sbjct: 2 KPVFCGNFEYDARESDLERLFRKYGKVERVDMKA-----GFAFVYMEDERDAEDAIRALD 56
Query: 65 RHGYDFDGHRLRVELA 80
R Y G RLRVE
Sbjct: 57 RFEYGRTGRRLRVEWT 72
>AT1G23860.1 | chr1:8428091-8429164 REVERSE LENGTH=188
Length = 187
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 48/76 (63%), Gaps = 12/76 (15%)
Query: 9 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAQDAIYG---R 65
+YVGNL + ERE+ED F +G + ++ + RPPGYAF+EF+D RDA DAI +
Sbjct: 4 VYVGNLDPRVTERELEDEFKAFGVLRNV--WVARRPPGYAFLEFDDERDALDAISALDRK 61
Query: 66 HGYDFDGHRLRVELAH 81
+G+ RVEL+H
Sbjct: 62 NGW-------RVELSH 70
>AT2G46610.1 | chr2:19136769-19138492 REVERSE LENGTH=251
Length = 250
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 37/56 (66%), Gaps = 5/56 (8%)
Query: 7 RTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAQDAI 62
R +YVGN D R ++E LF K+GR+ +D+K GYAFV FED RDA+DAI
Sbjct: 2 RHVYVGNFDYDTRHSDLERLFSKFGRVKRVDMK-----SGYAFVYFEDERDAEDAI 52
>AT4G12640.1 | chr4:7462697-7467630 FORWARD LENGTH=824
Length = 823
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Query: 6 SRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPG--YAFVEFEDPRDAQDAIY 63
SR ++VGNLP I ERE+ D F ++G + + + PG YAFV F DA AI
Sbjct: 22 SRHLWVGNLPHGILERELADRFLRFGELESLAFQ-----PGRSYAFVNFNHDEDAFAAIE 76
Query: 64 GRHGYDFDGHRLRVELA 80
G+ G+ LR+E A
Sbjct: 77 SLQGFPLSGNPLRIEFA 93
>AT3G11400.2 | chr3:3578536-3580366 FORWARD LENGTH=322
Length = 321
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Query: 1 MSRRN-SRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPP---GYAFVEFEDPR 56
M RRN ++ V NL D RE ++ +LF+ +G + + + I + G+ FV F
Sbjct: 233 MRRRNDENSVRVTNLSEDTREPDLMELFHPFGAVTRVYVAIDQKTGVSRGFGFVNFVSRE 292
Query: 57 DAQDAIYGRHGYDFDGHRLRVELA 80
DAQ AI +GY +D LRVE A
Sbjct: 293 DAQRAINKLNGYGYDNLILRVEWA 316
>AT1G60650.1 | chr1:22340089-22342148 FORWARD LENGTH=293
Length = 292
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 9 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKI---PPRPPGYAFVEFEDPRDAQDAIYGR 65
I+VG L D+ ER++E F +YG+I + + + RP G+ F+ F D R A DAI
Sbjct: 14 IFVGGLSWDVTERQLESTFDRYGKITECQIMVGRDTGRPRGFGFITFTDRRGADDAIKHM 73
Query: 66 HGYDFDGHRLRVELA 80
HG + + V A
Sbjct: 74 HGRELGNKVISVNKA 88
>AT1G73530.1 | chr1:27643801-27645386 REVERSE LENGTH=182
Length = 181
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 9 IYVGNLPGDIREREVEDLFYKYGRIVDIDL---KIPPRPPGYAFVEFEDPRDAQDAIYGR 65
+YV L E + D F ++G ++ +++ K+ RP G+AF+ +E +A AI G
Sbjct: 79 LYVSGLSFRTTEDTLRDTFEQFGNLIHMNMVMDKVANRPKGFAFLRYETEEEAMKAIQGM 138
Query: 66 HGYDFDGHRLRVELA 80
HG DG + VE A
Sbjct: 139 HGKFLDGRVIFVEEA 153
>AT3G52660.1 | chr3:19522598-19524735 FORWARD LENGTH=472
Length = 471
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 7 RTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPG-----YAFVEFEDPRDAQDA 61
+ +Y+ NLP DI + ++ LF +G+I+ + IPP PG Y FV + + A
Sbjct: 268 KALYIKNLPRDITQERLKALFEHHGKILKV--VIPPAKPGKEDSRYGFVHYAERTSVMRA 325
Query: 62 IYGRHGYDFDGHRLRVELA 80
+ Y+ DGH L LA
Sbjct: 326 LKNTERYEIDGHMLDCTLA 344
>AT4G24770.1 | chr4:12766223-12767952 REVERSE LENGTH=330
Length = 329
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 9 IYVGNLPGDIREREVEDLFYKYGRIVDIDL---KIPPRPPGYAFVEFEDPRDAQDAIYGR 65
+YVGNLP D+ +E LF ++G++V+ + + R G+ FV D + +AI
Sbjct: 246 VYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISAL 305
Query: 66 HGYDFDGHRLRVELAH 81
G + +G +RV +A
Sbjct: 306 DGQNLEGRAIRVNVAE 321
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.136 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,523,128
Number of extensions: 163646
Number of successful extensions: 730
Number of sequences better than 1.0e-05: 21
Number of HSP's gapped: 790
Number of HSP's successfully gapped: 23
Length of query: 294
Length of database: 11,106,569
Length adjustment: 98
Effective length of query: 196
Effective length of database: 8,419,801
Effective search space: 1650280996
Effective search space used: 1650280996
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 111 (47.4 bits)