BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0362300 Os05g0362300|AK101894
(173 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G02816.1 | chr1:621637-622137 FORWARD LENGTH=167 165 9e-42
AT4G02370.1 | chr4:1042458-1042961 FORWARD LENGTH=168 163 4e-41
AT4G02360.1 | chr4:1041179-1041643 FORWARD LENGTH=155 150 3e-37
AT1G02813.1 | chr1:620773-621222 FORWARD LENGTH=150 121 1e-28
AT5G19590.1 | chr5:6611614-6612069 REVERSE LENGTH=152 66 1e-11
AT5G19860.1 | chr5:6714533-6715837 REVERSE LENGTH=182 65 2e-11
AT5G16380.1 | chr5:5359730-5360613 REVERSE LENGTH=196 60 5e-10
AT1G55265.1 | chr1:20617326-20617853 FORWARD LENGTH=176 59 1e-09
AT3G07470.1 | chr3:2387291-2388343 REVERSE LENGTH=170 58 2e-09
AT2G03350.1 | chr2:1019733-1021071 REVERSE LENGTH=180 54 5e-08
AT3G07460.2 | chr3:2384544-2385617 REVERSE LENGTH=272 53 6e-08
AT5G01610.1 | chr5:231075-231994 FORWARD LENGTH=171 52 1e-07
AT5G37070.1 | chr5:14651091-14652147 FORWARD LENGTH=171 50 6e-07
AT5G54530.1 | chr5:22152781-22154201 FORWARD LENGTH=162 49 2e-06
>AT1G02816.1 | chr1:621637-622137 FORWARD LENGTH=167
Length = 166
Score = 165 bits (418), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 77/124 (62%), Positives = 95/124 (76%), Gaps = 2/124 (1%)
Query: 28 PTAYEALATFDFPPGILPKGVVSYTLDDATGDFTATLNTTSTCAFSIQGSYSLRYQRRLS 87
PTAY L +++FP GILPKGVVSY LD +TG F A N +C+F++QGSY L Y+ +S
Sbjct: 30 PTAYTLLQSYNFPVGILPKGVVSYDLDKSTGQFHAYFN--KSCSFALQGSYQLDYKSTIS 87
Query: 88 GRIAADRLTNLQGVSVKILFLWVNIVEVTRHGDELGFSVGIASADFGIDNFLESPQCGCG 147
G I+ +++T L GV VK+LFLW+NIVEV R+GDEL FSVGI SA+F ID F ESPQCGCG
Sbjct: 88 GYISENKITKLTGVKVKVLFLWLNIVEVIRNGDELEFSVGITSANFEIDEFYESPQCGCG 147
Query: 148 FDCH 151
FDC
Sbjct: 148 FDCK 151
>AT4G02370.1 | chr4:1042458-1042961 FORWARD LENGTH=168
Length = 167
Score = 163 bits (413), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 74/127 (58%), Positives = 94/127 (74%), Gaps = 2/127 (1%)
Query: 28 PTAYEALATFDFPPGILPKGVVSYTLDDATGDFTATLNTTSTCAFSIQGSYSLRYQRRLS 87
PTAY L +++FP GILPKGVV+Y LD TG F A N +C+F++ GSY L Y+ +S
Sbjct: 30 PTAYSLLQSYNFPVGILPKGVVAYDLDTTTGKFHAYFN--DSCSFNLVGSYQLNYKSTIS 87
Query: 88 GRIAADRLTNLQGVSVKILFLWVNIVEVTRHGDELGFSVGIASADFGIDNFLESPQCGCG 147
G I+ ++L L GV VK+LFLW+NIVEV R+GDE+ FSVGI SA+F I FLESPQCGCG
Sbjct: 88 GYISENKLKKLTGVKVKVLFLWLNIVEVIRNGDEMEFSVGITSANFAIQEFLESPQCGCG 147
Query: 148 FDCHDHR 154
F+C D +
Sbjct: 148 FECKDSK 154
>AT4G02360.1 | chr4:1041179-1041643 FORWARD LENGTH=155
Length = 154
Score = 150 bits (379), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 73/126 (57%), Positives = 91/126 (72%), Gaps = 3/126 (2%)
Query: 27 KPTAYEALATFDFPPGILPKGVVSYTLDDATGDFTATLNTTSTCAFSIQGSYSLRYQRRL 86
KPTAY+A+ ++ PPGILPKGVV Y L+ TG+F N TC F+IQ SY L+Y+ +
Sbjct: 26 KPTAYDAVKLYNLPPGILPKGVVDYELNPKTGNFKVYFN--DTCEFTIQ-SYQLKYKSTI 82
Query: 87 SGRIAADRLTNLQGVSVKILFLWVNIVEVTRHGDELGFSVGIASADFGIDNFLESPQCGC 146
SG I+ + NL+GVSVK+LF WVNI EV+ G +L FSVGIASA F NF ESPQCGC
Sbjct: 83 SGVISPGHVKNLKGVSVKVLFFWVNIAEVSLDGADLDFSVGIASASFPAANFEESPQCGC 142
Query: 147 GFDCHD 152
GFDC++
Sbjct: 143 GFDCNN 148
>AT1G02813.1 | chr1:620773-621222 FORWARD LENGTH=150
Length = 149
Score = 121 bits (304), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 60/127 (47%), Positives = 82/127 (64%), Gaps = 3/127 (2%)
Query: 25 ETKPTAYEALATFDFPPGILPKGVVSYTLDDATGDFTATLNTTSTCAFSIQGSYSLRYQR 84
+ K + Y+ L + P GILP+GV Y L+ TG F NTT C FSI SY ++Y+
Sbjct: 20 QKKRSVYQVLENYTLPRGILPEGVHDYDLNRRTGVFKVRFNTT--CQFSID-SYKVKYKP 76
Query: 85 RLSGRIAADRLTNLQGVSVKILFLWVNIVEVTRHGDELGFSVGIASADFGIDNFLESPQC 144
+SG I R+ L GVSVK+LF W+NI EV+R GD++ F VG AS +F F++SP+C
Sbjct: 77 VISGIITRGRVIRLIGVSVKVLFFWINISEVSRDGDDVEFFVGAASEEFSSKYFVDSPKC 136
Query: 145 GCGFDCH 151
GCGF+C+
Sbjct: 137 GCGFNCY 143
>AT5G19590.1 | chr5:6611614-6612069 REVERSE LENGTH=152
Length = 151
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 61/120 (50%), Gaps = 4/120 (3%)
Query: 27 KPT-AYEALATFDFPPGILPKGVVSYTLDDATGDFTATLNTTSTCAFSIQ-GSYSLRYQR 84
KPT A+ L FP G+LP V Y L+ +GDF+ LN C ++ +Y Y
Sbjct: 27 KPTRAHAELTNHGFPIGLLPLSVKDYFLNQTSGDFSLFLN--GACKITLPPDNYIATYSN 84
Query: 85 RLSGRIAADRLTNLQGVSVKILFLWVNIVEVTRHGDELGFSVGIASADFGIDNFLESPQC 144
+++GRI+ ++ LQG+ V+ F +I + GD L F V +A + NF ES C
Sbjct: 85 KVTGRISQGKIAELQGIRVRAFFKSWSITGIRSSGDNLVFEVAGITAKYPSKNFDESLDC 144
>AT5G19860.1 | chr5:6714533-6715837 REVERSE LENGTH=182
Length = 181
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 55/119 (46%), Gaps = 8/119 (6%)
Query: 29 TAYEALATFDFPPGILPKGVVSYTLDDATGDFTATLNTTSTCAFSIQGSYSLRYQRRLSG 88
T YE L + P G+LP V +TL D G F L + F Y + Y + +SG
Sbjct: 35 TVYELLPKYGLPSGLLPDTVTDFTLSD-DGRFVVHLPNSCEIEFD----YLVHYDKTISG 89
Query: 89 RIAADRLTNLQGVSVKILFLWVNIVEVTRH---GDELGFSVGIASADFGIDNFLESPQC 144
RI +T L+G+ VK F+W+++ E+ D + F VG + ID F C
Sbjct: 90 RIGYGSITELKGIQVKKFFIWLDVDEIKVDLPPSDSIYFKVGFINKKLDIDQFKTIHSC 148
>AT5G16380.1 | chr5:5359730-5360613 REVERSE LENGTH=196
Length = 195
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 58/119 (48%), Gaps = 8/119 (6%)
Query: 28 PTAYEALATFDFPPGILPKGVVSYTLDDATGDFTATLNTTSTCAFSIQGSYSLRYQRRLS 87
P+ Y+ L + P GI+PKGV ++++D TG FT L F Q + +S
Sbjct: 29 PSFYDYLRESNLPAGIVPKGVTNFSIDIKTGRFTVALPVPCDAKFENQ----FHFDYNIS 84
Query: 88 GRIAADRLTNLQGVSVKILFLWVNIVEVTRHGDELG---FSVGIASADFGIDNFLESPQ 143
G ++ R+ NL GV+ K LFLW + + G F VG+A + F ESP+
Sbjct: 85 GVLSDGRIGNLSGVTQKELFLWFAVKGIHVDPQSSGLIHFDVGVADKQLSLSLF-ESPR 142
>AT1G55265.1 | chr1:20617326-20617853 FORWARD LENGTH=176
Length = 175
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 60/124 (48%), Gaps = 6/124 (4%)
Query: 31 YEALATFDFPPGILPKGVVSYTLDDATGDFTATLNTTSTCAFSIQGSYSLRYQRRLSGRI 90
++ L + FP G+LP V SYT+ D GDFT L ++ FS Q + Y + ++G++
Sbjct: 55 HDLLPRYGFPKGLLPNNVKSYTISD-DGDFTVDLISSCYVKFSDQLVF---YGKNIAGKL 110
Query: 91 AADRLTNLQGVSVKILFLWVNI--VEVTRHGDELGFSVGIASADFGIDNFLESPQCGCGF 148
+ + +++G+ K FLW+ I +E + FSVG S F P C
Sbjct: 111 SYGSVKDVRGIQAKEAFLWLPITAMESDPSSATVVFSVGFVSKTLPASMFENVPSCSRNL 170
Query: 149 DCHD 152
+ D
Sbjct: 171 NLQD 174
>AT3G07470.1 | chr3:2387291-2388343 REVERSE LENGTH=170
Length = 169
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 29 TAYEALATFDFPPGILPKGVVSYTLDDATGDFTATLNTTSTCAFSIQGSYSLRYQRRLSG 88
T YE L P GI PKGV +T D TG F+ LN + + + Y ++G
Sbjct: 30 TIYEILLANGLPSGIFPKGVREFTFDVETGRFSVYLNQACEAKYETE----IHYDANITG 85
Query: 89 RIAADRLTNLQGVSVKILFLWVNI----VEVTRHGDELGFSVGIASADFGIDNFLESPQ 143
I + ++++L G+S + LFLW + V+V G + F VG+ + + F E+P+
Sbjct: 86 TIGSAQISDLSGISAQELFLWFPVKGIRVDVPSSG-LIYFDVGVVRKQYSLSLF-ETPR 142
>AT2G03350.1 | chr2:1019733-1021071 REVERSE LENGTH=180
Length = 179
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 51/101 (50%), Gaps = 6/101 (5%)
Query: 34 LATFDFPPGILPKGVVSYTLDDATGDFTATLNTTSTCAFSIQGSYSLRYQRRLSGRIAAD 93
L ++ PPG+ P+ ++ Y D+ T +S C + + ++RY R+ G +
Sbjct: 63 LKEYNLPPGLFPQNIICYEFDETKNKLTVFF--SSPCEVTFKDGSAIRYATRVKGILLRG 120
Query: 94 RLTNLQGVSVKILFLWVNIVEV---TRHGDELGFSVGIASA 131
+L ++G+ K+L +WV + + + D+L F+ G+ +
Sbjct: 121 KLMGVEGMKTKVL-VWVKVTTISVESSKSDKLWFTAGVKKS 160
>AT3G07460.2 | chr3:2384544-2385617 REVERSE LENGTH=272
Length = 271
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 58/116 (50%), Gaps = 10/116 (8%)
Query: 32 EALATFDFPPGILPKGVVSYTLDDATGDFTATLNTTSTCAFSIQGSYSLRYQRRLSGRIA 91
E L P G+ PKGV +T++ TG F+ LN + + + L Y +SG I
Sbjct: 32 EILLANGLPLGLFPKGVKGFTVNGETGRFSVYLNQSCQAKYETE----LHYDEIVSGTIG 87
Query: 92 ADRLTNLQGVSVKILFLWVNI----VEVTRHGDELGFSVGIASADFGIDNFLESPQ 143
++ +L G+S + LFLW+ + V+V G + F VG+ + + F E+P+
Sbjct: 88 YAQIRDLSGISAQELFLWLQVKGIRVDVPSSG-LIFFDVGVLRKQYSLSLF-ETPR 141
>AT5G01610.1 | chr5:231075-231994 FORWARD LENGTH=171
Length = 170
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 50/100 (50%), Gaps = 3/100 (3%)
Query: 32 EALATFDFPPGILPKGVVSYTLDDATGDFTATLNTTSTCAFSIQGSYSLRYQRRLSGRIA 91
E L +D P GI P +Y D+ T T + S C + S L++ ++G +
Sbjct: 56 ELLKEYDLPIGIFPGDATNYEFDEETKKLTVLI--PSICEVGYKDSSVLKFTTTVTGHLE 113
Query: 92 ADRLTNLQGVSVKILFLWVNIVEVTRHGDELGFSVGIASA 131
+LT+++G+ K++ +WV + ++ ++ F+ G+ +
Sbjct: 114 KGKLTDVEGIKTKVM-IWVKVTSISTDASKVYFTAGMKKS 152
>AT5G37070.1 | chr5:14651091-14652147 FORWARD LENGTH=171
Length = 170
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 49/100 (49%), Gaps = 3/100 (3%)
Query: 32 EALATFDFPPGILPKGVVSYTLDDATGDFTATLNTTSTCAFSIQGSYSLRYQRRLSGRIA 91
E L F P GI P+ +Y ++ TG T + TC + S LR+ ++G +
Sbjct: 56 ELLKEFGLPVGIFPQDATNYEFNEETGKLTVFI--PETCEVGYRDSSVLRFSTTVTGYLE 113
Query: 92 ADRLTNLQGVSVKILFLWVNIVEVTRHGDELGFSVGIASA 131
+L ++G+ K++ +WV + ++ ++ F+ GI +
Sbjct: 114 KGKLAEVEGMKTKVM-IWVKVTCISADSSKVYFTAGIKKS 152
>AT5G54530.1 | chr5:22152781-22154201 FORWARD LENGTH=162
Length = 161
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 55/120 (45%), Gaps = 8/120 (6%)
Query: 28 PTAYEALATFDFPPGILPKGVVSYTLDDATGDFTATLNTTSTCAFSIQGSYSLRYQRRLS 87
PT ++ L + P G+LP+ V SY L + G L F ++ ++ +
Sbjct: 27 PTVHDVLRSEGLPAGLLPQEVDSYILHN-DGRLEVFLAAPCYAKFET----NVHFEAVVR 81
Query: 88 GRIAADRLTNLQGVSVKILFLWVNIVEVTRHGDELG---FSVGIASADFGIDNFLESPQC 144
G ++ L ++G+S K LFLW+ + ++ G F +G+A + F + P+C
Sbjct: 82 GNLSYGSLVGVEGLSQKELFLWLQVKDIVVENPNSGVIVFDIGVAFKQLSLSLFEDPPKC 141
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.322 0.139 0.430
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,034,758
Number of extensions: 108285
Number of successful extensions: 226
Number of sequences better than 1.0e-05: 15
Number of HSP's gapped: 219
Number of HSP's successfully gapped: 15
Length of query: 173
Length of database: 11,106,569
Length adjustment: 92
Effective length of query: 81
Effective length of database: 8,584,297
Effective search space: 695328057
Effective search space used: 695328057
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 108 (46.2 bits)