BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0357600 Os05g0357600|AK111540
(399 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G72660.1 | chr1:27354161-27356543 FORWARD LENGTH=400 734 0.0
AT1G17470.1 | chr1:6003442-6006155 FORWARD LENGTH=400 725 0.0
AT4G39520.1 | chr4:18371329-18374000 REVERSE LENGTH=370 408 e-114
AT5G18570.1 | chr5:6171839-6174823 REVERSE LENGTH=682 66 3e-11
AT1G07615.1 | chr1:2342277-2344200 REVERSE LENGTH=494 59 4e-09
AT1G56050.1 | chr1:20963793-20966181 FORWARD LENGTH=422 50 2e-06
AT5G66470.1 | chr5:26541986-26544302 REVERSE LENGTH=428 49 3e-06
AT1G50920.1 | chr1:18870555-18872570 FORWARD LENGTH=672 49 5e-06
>AT1G72660.1 | chr1:27354161-27356543 FORWARD LENGTH=400
Length = 399
Score = 734 bits (1894), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/398 (87%), Positives = 370/398 (92%)
Query: 1 MGILERIKEIEAEMARTQKNKATEYHLGQLKAKIAKLRTQLLEPPKGSTGGGDGFEVTKF 60
MGI+ERIKEIEAEMARTQKNKATEYHLGQLKAKIAKLRTQLLEPPKGS+GGGDGFEVTK+
Sbjct: 1 MGIVERIKEIEAEMARTQKNKATEYHLGQLKAKIAKLRTQLLEPPKGSSGGGDGFEVTKY 60
Query: 61 GHGRVALIGFPSVGKSTLLTMLTGTHSEAASYEFTTLTCIPGIIQYNDTKIQLLDLPGII 120
GHGRVALIGFPSVGKSTLLTMLTGTHSEAASYEFTTLTCIPG+I YNDTKIQLLDLPGII
Sbjct: 61 GHGRVALIGFPSVGKSTLLTMLTGTHSEAASYEFTTLTCIPGVIHYNDTKIQLLDLPGII 120
Query: 121 EGASEGKGRGRQVIAVAKSSDLVLMVLDASKSEGHRQILTRELEAVGLRLNKRPPQIYFK 180
EGASEGKGRGRQVIAVAKSSDLVLMVLDASKSEGHRQILT+ELEAVGLRLNKRPPQIYFK
Sbjct: 121 EGASEGKGRGRQVIAVAKSSDLVLMVLDASKSEGHRQILTKELEAVGLRLNKRPPQIYFK 180
Query: 181 KKKTGGISFNSMIPLTHVDEKLCYQILHEYKIHNAEVLFREDATVDDFIDVIEGNRKYIK 240
KKKTGGISFN+ PLT +DEKLCYQILHEYKIHNAEVLFREDATVDDFIDV+EGNRKYIK
Sbjct: 181 KKKTGGISFNTTTPLTRIDEKLCYQILHEYKIHNAEVLFREDATVDDFIDVVEGNRKYIK 240
Query: 241 CVYVYNKXXXXXXXXXXKLARQPNSLVISCNLQLNLDRLLARMWEEMGLVRVYTKPQGQQ 300
CVYVYNK +LARQPNS+VISCNL+LNLDRLLARMW+EMGLVRVY+KPQ QQ
Sbjct: 241 CVYVYNKIDVVGIDDVDRLARQPNSIVISCNLKLNLDRLLARMWDEMGLVRVYSKPQSQQ 300
Query: 301 PDFTDPVVLSTDRGGCTVEDFCNHIHRSLVKDVKYVLVWGTSARHYPQHCGLGHVLQDED 360
PDF +P VLS DRGGCTVEDFCN +HR+LVKD+KY LVWGTSARHYPQHCGL H L+DED
Sbjct: 301 PDFDEPFVLSADRGGCTVEDFCNQVHRTLVKDMKYALVWGTSARHYPQHCGLFHHLEDED 360
Query: 361 VVQIVXXXXXXDGGRGRFKSHTNAPARISDREKKAPLK 398
VVQIV +GGRGRFKSH+NAPARI+DREKKAPLK
Sbjct: 361 VVQIVKKKVREEGGRGRFKSHSNAPARIADREKKAPLK 398
>AT1G17470.1 | chr1:6003442-6006155 FORWARD LENGTH=400
Length = 399
Score = 725 bits (1871), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/398 (86%), Positives = 370/398 (92%)
Query: 1 MGILERIKEIEAEMARTQKNKATEYHLGQLKAKIAKLRTQLLEPPKGSTGGGDGFEVTKF 60
MGI+ERIKEIEAEMARTQKNKATEYHLGQLKAKIAKLRTQLLEPPKG++GGG+GFEVTK+
Sbjct: 1 MGIIERIKEIEAEMARTQKNKATEYHLGQLKAKIAKLRTQLLEPPKGASGGGEGFEVTKY 60
Query: 61 GHGRVALIGFPSVGKSTLLTMLTGTHSEAASYEFTTLTCIPGIIQYNDTKIQLLDLPGII 120
GHGRVALIGFPSVGKSTLLTMLTGTHSEAASYEFTTLTCIPG+I YNDTKIQLLDLPGII
Sbjct: 61 GHGRVALIGFPSVGKSTLLTMLTGTHSEAASYEFTTLTCIPGVIHYNDTKIQLLDLPGII 120
Query: 121 EGASEGKGRGRQVIAVAKSSDLVLMVLDASKSEGHRQILTRELEAVGLRLNKRPPQIYFK 180
EGASEGKGRGRQVIAVAKSSDLVLMVLDASKSEGHRQILT+ELEAVGLRLNK PPQIYFK
Sbjct: 121 EGASEGKGRGRQVIAVAKSSDLVLMVLDASKSEGHRQILTKELEAVGLRLNKTPPQIYFK 180
Query: 181 KKKTGGISFNSMIPLTHVDEKLCYQILHEYKIHNAEVLFREDATVDDFIDVIEGNRKYIK 240
KKKTGGISFN+ PLTH+DEKLCYQILHEYKIHNAEVLFRE+ATVDDFIDVIEGNRKYIK
Sbjct: 181 KKKTGGISFNTTAPLTHIDEKLCYQILHEYKIHNAEVLFRENATVDDFIDVIEGNRKYIK 240
Query: 241 CVYVYNKXXXXXXXXXXKLARQPNSLVISCNLQLNLDRLLARMWEEMGLVRVYTKPQGQQ 300
CVYVYNK +L+RQPNS+VISCNL+LNLDRLLARMW+EMGLVRVY+KPQGQQ
Sbjct: 241 CVYVYNKIDVVGIDDVDRLSRQPNSIVISCNLKLNLDRLLARMWDEMGLVRVYSKPQGQQ 300
Query: 301 PDFTDPVVLSTDRGGCTVEDFCNHIHRSLVKDVKYVLVWGTSARHYPQHCGLGHVLQDED 360
PDF +P VLS+DRGGCTVEDFCNH+HR+LVKD+KY LVWGTS RH PQ+CGL L+DED
Sbjct: 301 PDFDEPFVLSSDRGGCTVEDFCNHVHRTLVKDMKYALVWGTSTRHNPQNCGLSQHLEDED 360
Query: 361 VVQIVXXXXXXDGGRGRFKSHTNAPARISDREKKAPLK 398
VVQIV +GGRGRFKSH+NAPARI+DREKKAPLK
Sbjct: 361 VVQIVKKKERDEGGRGRFKSHSNAPARIADREKKAPLK 398
>AT4G39520.1 | chr4:18371329-18374000 REVERSE LENGTH=370
Length = 369
Score = 408 bits (1049), Expect = e-114, Method: Compositional matrix adjust.
Identities = 205/365 (56%), Positives = 261/365 (71%), Gaps = 4/365 (1%)
Query: 3 ILERIKEIEAEMARTQKNKATEYHLGQLKAKIAKLRTQLLEPP--KGSTGGGDGFEVTKF 60
I+++IKEIE EMA+TQKNKAT +HLG LKAK+AKLR LL PP G G G+GF+VTK
Sbjct: 4 IMQKIKEIEDEMAKTQKNKATSHHLGLLKAKLAKLRRDLLAPPTKGGGGGAGEGFDVTKS 63
Query: 61 GHGRVALIGFPSVGKSTLLTMLTGTHSEAASYEFTTLTCIPGIIQYNDTKIQLLDLPGII 120
G RV L+GFPSVGKSTLL LTGT SE ASYEFTTLTCIPG+I Y KIQLLDLPGII
Sbjct: 64 GDSRVGLVGFPSVGKSTLLNKLTGTFSEVASYEFTTLTCIPGVITYRGAKIQLLDLPGII 123
Query: 121 EGASEGKGRGRQVIAVAKSSDLVLMVLDASKSEGHRQILTRELEAVGLRLNKRPPQIYFK 180
EGA +GKGRGRQVI+ A++ + +L+VLDA K H++++ +ELE G+RLNK PP + F+
Sbjct: 124 EGAKDGKGRGRQVISTARTCNCILIVLDAIKPITHKRLIEKELEGFGIRLNKEPPNLTFR 183
Query: 181 KKKTGGISFNSMIPLTHVDEKLCYQILHEYKIHNAEVLFREDATVDDFIDVIEGNRKYIK 240
KK GGI+ S + +TH+D I EY++HNA++ R DAT DD IDVIEG+R Y+
Sbjct: 184 KKDKGGINLTSTVAVTHLDLDTVKAICGEYRMHNADITLRYDATADDLIDVIEGSRIYMP 243
Query: 241 CVYVYNKXXXXXXXXXXKLARQPNSLVISCNLQLNLDRLLARMWEEMGLVRVYTKPQGQQ 300
C+Y NK L + P+ +S +L+ NLD LL ++WE + L R+YTKP+
Sbjct: 244 CIYAVNKIDSITLEELEILDKLPHYCPVSAHLEWNLDGLLDKIWEYLDLTRIYTKPKAMN 303
Query: 301 PDFTDPVVLSTDRGGCTVEDFCNHIHRSLVKDVKYVLVWGTSARHYPQHCGLGHVLQDED 360
PD+ DPV+LS+ + TVEDFC IH+ ++K KY LVWG+SA+H PQ G H L+DED
Sbjct: 304 PDYDDPVILSSKKR--TVEDFCIRIHKDMLKQFKYALVWGSSAKHKPQRVGKEHELEDED 361
Query: 361 VVQIV 365
VVQIV
Sbjct: 362 VVQIV 366
>AT5G18570.1 | chr5:6171839-6174823 REVERSE LENGTH=682
Length = 681
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 70/129 (54%), Gaps = 9/129 (6%)
Query: 65 VALIGFPSVGKSTLLTMLTGTHSEAASYEFTTLTCIPGIIQYN-DTKIQLLDLPGIIEGA 123
V ++G P+ GKSTLL++++ A+Y FTTL G++ ++ D+ + + DLPG++EGA
Sbjct: 381 VGIVGAPNAGKSTLLSVISAAQPTIANYPFTTLLPNLGVVSFDYDSTMVVADLPGLLEGA 440
Query: 124 SEGKGRGRQVIAVAKSSDLVLMVLDASKSEGHRQILTRELEAVGLRLNKRPPQIYFKKKK 183
G G G + + + ++ V+D S + E EAV L L P+I +K
Sbjct: 441 HRGFGLGHEFLRHTERCSALVHVVDGSAPQPE-----LEFEAVRLELELFSPEI---AEK 492
Query: 184 TGGISFNSM 192
+++N M
Sbjct: 493 PYVVAYNKM 501
>AT1G07615.1 | chr1:2342277-2344200 REVERSE LENGTH=494
Length = 493
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%)
Query: 65 VALIGFPSVGKSTLLTMLTGTHSEAASYEFTTLTCIPGIIQYNDTKIQLLDLPGIIEGAS 124
V L+G P+ GKSTLL L+ Y FTTL G + Y+D + + D+PG+I+GA
Sbjct: 306 VGLVGMPNAGKSTLLGALSRAKPRVGHYAFTTLRPNLGNVNYDDFSMTVADIPGLIKGAH 365
Query: 125 EGKGRGRQVIAVAKSSDLVLMVLD 148
+ +G G + + + ++ V+D
Sbjct: 366 QNRGLGHNFLRHIERTKVLAYVVD 389
>AT1G56050.1 | chr1:20963793-20966181 FORWARD LENGTH=422
Length = 421
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 56/102 (54%), Gaps = 18/102 (17%)
Query: 64 RVALIGFPSVGKSTLL-TMLTGTHSEAASYEFTTLTCIPGIIQYNDTKIQLL-------- 114
+ ++G P+VGKSTL ++ ++AA++ F T+ GI+ D+++Q+L
Sbjct: 55 KAGIVGLPNVGKSTLFNAVVENGKAQAANFPFCTIEPNVGIVAVPDSRLQVLSKLSGSQK 114
Query: 115 ---------DLPGIIEGASEGKGRGRQVIAVAKSSDLVLMVL 147
D+ G+++GAS+G+G G + ++ + D +L V+
Sbjct: 115 TVPASIEFVDIAGLVKGASQGEGLGNKFLSHIREVDSILQVV 156
>AT5G66470.1 | chr5:26541986-26544302 REVERSE LENGTH=428
Length = 427
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 69/143 (48%), Gaps = 16/143 (11%)
Query: 53 DGFEVTKFGH--------GRVALIGFPSVGKSTLLTMLTGTH-SEAASYEFTTLTCIPGI 103
D +E+ + GH G VA++G P+VGKSTL + G S TT I GI
Sbjct: 112 DDYEMEELGHTPNTHHRSGYVAVVGMPNVGKSTLSNQMIGQKISIVTDKPQTTRHRILGI 171
Query: 104 IQYNDTKIQLLDLPGIIEGASE--GKGRGRQVIAVAKSSDLVLMVLDASKSEGHRQILTR 161
+ ++ L D PG+IE + V A ++D V++++DA K+ + + + +
Sbjct: 172 CSSPEYQMILYDTPGVIEKKMHRLDTMMMKNVRDAAINADCVVILVDACKTPTNIEEVLK 231
Query: 162 ELEAVGL-RLNKRPPQIYFKKKK 183
E GL L K+PP + KK
Sbjct: 232 E----GLGDLEKKPPMLLVMNKK 250
>AT1G50920.1 | chr1:18870555-18872570 FORWARD LENGTH=672
Length = 671
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
Query: 65 VALIGFPSVGKSTLLTMLTGTHSEAASYEFTTLTCIPGIIQYNDTKIQLLDLPGIIEGAS 124
V + G+P+VGKS+ + +T + Y FTT + G Y + Q++D PGI++
Sbjct: 171 VLICGYPNVGKSSFMNKVTRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPF 230
Query: 125 EGKG--RGRQVIAVAKSSDLVLMVLDASKSEGH 155
E + + A+A VL LD S S G+
Sbjct: 231 EDRNIIEMCSITALAHLRAAVLFFLDISGSCGY 263
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.137 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,538,852
Number of extensions: 356264
Number of successful extensions: 1014
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 1012
Number of HSP's successfully gapped: 8
Length of query: 399
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 298
Effective length of database: 8,337,553
Effective search space: 2484590794
Effective search space used: 2484590794
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 113 (48.1 bits)