BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0346400 Os05g0346400|AK102727
(170 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G08890.1 | chr3:2706701-2707775 FORWARD LENGTH=171 245 7e-66
AT5G01610.1 | chr5:231075-231994 FORWARD LENGTH=171 236 5e-63
AT5G37070.1 | chr5:14651091-14652147 FORWARD LENGTH=171 234 1e-62
AT2G03350.1 | chr2:1019733-1021071 REVERSE LENGTH=180 159 8e-40
AT5G16380.1 | chr5:5359730-5360613 REVERSE LENGTH=196 61 4e-10
AT1G02816.1 | chr1:621637-622137 FORWARD LENGTH=167 59 9e-10
AT4G02370.1 | chr4:1042458-1042961 FORWARD LENGTH=168 58 2e-09
AT3G07470.1 | chr3:2387291-2388343 REVERSE LENGTH=170 58 3e-09
AT4G02360.1 | chr4:1041179-1041643 FORWARD LENGTH=155 57 7e-09
AT3G07460.2 | chr3:2384544-2385617 REVERSE LENGTH=272 52 2e-07
AT1G55265.1 | chr1:20617326-20617853 FORWARD LENGTH=176 49 1e-06
>AT3G08890.1 | chr3:2706701-2707775 FORWARD LENGTH=171
Length = 170
Score = 245 bits (626), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 112/170 (65%), Positives = 138/170 (81%)
Query: 1 MDQVLNKVGSYWFSKRASKEXXXXXXXXXXXXXXXXXXAKWMVNKIKGKMQKALPDLLKE 60
MDQ+LNKVGSYW K+A+K+ KW+VNKIKGKMQK LP+LLKE
Sbjct: 1 MDQILNKVGSYWLGKKANKQLDSVGDDINSLSSSIEGGTKWLVNKIKGKMQKPLPELLKE 60
Query: 61 YDMPAGLFPRDATNYEFNEETKKLTVYIPSACDVGYKDSSVLRFFTCVTGYLEKGKLSDI 120
+ +P G+FPRDATNYEFNE+T+KLTV+IPS C+VGYKD+SVLRF T VTG+LEKGKL+D+
Sbjct: 61 FGLPVGIFPRDATNYEFNEQTRKLTVFIPSICEVGYKDTSVLRFTTTVTGFLEKGKLADV 120
Query: 121 EGLKTKVLVWTKVTAIKTEGSKVHFTAGVKKTRSRDAYEVVRDGIPIDKF 170
EG+KTKV++W KVT+I + SKVHFTAG+KK+RSRDAYEV+RDG+ IDKF
Sbjct: 121 EGMKTKVMIWVKVTSISADSSKVHFTAGMKKSRSRDAYEVLRDGVEIDKF 170
>AT5G01610.1 | chr5:231075-231994 FORWARD LENGTH=171
Length = 170
Score = 236 bits (601), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 110/170 (64%), Positives = 136/170 (80%)
Query: 1 MDQVLNKVGSYWFSKRASKEXXXXXXXXXXXXXXXXXXAKWMVNKIKGKMQKALPDLLKE 60
MDQ+ NKVGSYW ++A+K+ KW+VNKIKGKMQK LP+LLKE
Sbjct: 1 MDQIFNKVGSYWLGQKANKQFDSVGNDLNSVSTSIEGGTKWLVNKIKGKMQKPLPELLKE 60
Query: 61 YDMPAGLFPRDATNYEFNEETKKLTVYIPSACDVGYKDSSVLRFFTCVTGYLEKGKLSDI 120
YD+P G+FP DATNYEF+EETKKLTV IPS C+VGYKDSSVL+F T VTG+LEKGKL+D+
Sbjct: 61 YDLPIGIFPGDATNYEFDEETKKLTVLIPSICEVGYKDSSVLKFTTTVTGHLEKGKLTDV 120
Query: 121 EGLKTKVLVWTKVTAIKTEGSKVHFTAGVKKTRSRDAYEVVRDGIPIDKF 170
EG+KTKV++W KVT+I T+ SKV+FTAG+KK+RSRDAYEV R+G+ +DKF
Sbjct: 121 EGIKTKVMIWVKVTSISTDASKVYFTAGMKKSRSRDAYEVQRNGLRVDKF 170
>AT5G37070.1 | chr5:14651091-14652147 FORWARD LENGTH=171
Length = 170
Score = 234 bits (598), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 107/170 (62%), Positives = 134/170 (78%)
Query: 1 MDQVLNKVGSYWFSKRASKEXXXXXXXXXXXXXXXXXXAKWMVNKIKGKMQKALPDLLKE 60
MDQ+LNKVGSYW ++A+KE KW+VNK+KGKMQK LP+LLKE
Sbjct: 1 MDQILNKVGSYWLGQKANKEFNSVGDDFNSLSSSIEGGTKWLVNKLKGKMQKPLPELLKE 60
Query: 61 YDMPAGLFPRDATNYEFNEETKKLTVYIPSACDVGYKDSSVLRFFTCVTGYLEKGKLSDI 120
+ +P G+FP+DATNYEFNEET KLTV+IP C+VGY+DSSVLRF T VTGYLEKGKL+++
Sbjct: 61 FGLPVGIFPQDATNYEFNEETGKLTVFIPETCEVGYRDSSVLRFSTTVTGYLEKGKLAEV 120
Query: 121 EGLKTKVLVWTKVTAIKTEGSKVHFTAGVKKTRSRDAYEVVRDGIPIDKF 170
EG+KTKV++W KVT I + SKV+FTAG+KK+RSRDAYEV+R G+ +DKF
Sbjct: 121 EGMKTKVMIWVKVTCISADSSKVYFTAGIKKSRSRDAYEVIRPGVGVDKF 170
>AT2G03350.1 | chr2:1019733-1021071 REVERSE LENGTH=180
Length = 179
Score = 159 bits (401), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 82/164 (50%), Positives = 105/164 (64%), Gaps = 3/164 (1%)
Query: 7 KVGSYWFSKRASKEXXXXXXXXXXXXXXXXXXAKWMVNKIKGKMQKALPDLLKEYDMPAG 66
KVGS W SK+A +E AKW+ NK+KGK K+LPDLLKEY++P G
Sbjct: 12 KVGSSWISKKAKEELSNITNDLTTFSSTVEEKAKWIFNKLKGKPLKSLPDLLKEYNLPPG 71
Query: 67 LFPRDATNYEFNEETKKLTVYIPSACDVGYKDSSVLRFFTCVTGYLEKGKLSDIEGLKTK 126
LFP++ YEF+E KLTV+ S C+V +KD S +R+ T V G L +GKL +EG+KTK
Sbjct: 72 LFPQNIICYEFDETKNKLTVFFSSPCEVTFKDGSAIRYATRVKGILLRGKLMGVEGMKTK 131
Query: 127 VLVWTKVTAIKTEGS---KVHFTAGVKKTRSRDAYEVVRDGIPI 167
VLVW KVT I E S K+ FTAGVKK+RS+D Y+ D I +
Sbjct: 132 VLVWVKVTTISVESSKSDKLWFTAGVKKSRSKDVYDTPHDAIKV 175
>AT5G16380.1 | chr5:5359730-5360613 REVERSE LENGTH=196
Length = 195
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 7/113 (6%)
Query: 56 DLLKEYDMPAGLFPRDATNYEFNEETKKLTVYIPSACDVGYKDSSVLRFFTCVTGYLEKG 115
D L+E ++PAG+ P+ TN+ + +T + TV +P CD +++ F ++G L G
Sbjct: 33 DYLRESNLPAGIVPKGVTNFSIDIKTGRFTVALPVPCDAKFENQ--FHFDYNISGVLSDG 90
Query: 116 KLSDIEGLKTK-VLVWTKVTAIKTEGSK---VHFTAGVK-KTRSRDAYEVVRD 163
++ ++ G+ K + +W V I + +HF GV K S +E RD
Sbjct: 91 RIGNLSGVTQKELFLWFAVKGIHVDPQSSGLIHFDVGVADKQLSLSLFESPRD 143
>AT1G02816.1 | chr1:621637-622137 FORWARD LENGTH=167
Length = 166
Score = 59.3 bits (142), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 58/115 (50%), Gaps = 3/115 (2%)
Query: 57 LLKEYDMPAGLFPRDATNYEFNEETKKLTVYIPSACDVGYKDSSVLRFFTCVTGYLEKGK 116
LL+ Y+ P G+ P+ +Y+ ++ T + Y +C + S L + + ++GY+ + K
Sbjct: 35 LLQSYNFPVGILPKGVVSYDLDKSTGQFHAYFNKSCSFALQGSYQLDYKSTISGYISENK 94
Query: 117 LSDIEGLKTKVL-VWTKVTAIKTEGSKVHFTAGVKKTRSR--DAYEVVRDGIPID 168
++ + G+K KVL +W + + G ++ F+ G+ + YE + G D
Sbjct: 95 ITKLTGVKVKVLFLWLNIVEVIRNGDELEFSVGITSANFEIDEFYESPQCGCGFD 149
>AT4G02370.1 | chr4:1042458-1042961 FORWARD LENGTH=168
Length = 167
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
Query: 56 DLLKEYDMPAGLFPRDATNYEFNEETKKLTVYIPSACDVGYKDSSVLRFFTCVTGYLEKG 115
LL+ Y+ P G+ P+ Y+ + T K Y +C S L + + ++GY+ +
Sbjct: 34 SLLQSYNFPVGILPKGVVAYDLDTTTGKFHAYFNDSCSFNLVGSYQLNYKSTISGYISEN 93
Query: 116 KLSDIEGLKTKVL-VWTKVTAIKTEGSKVHFTAGV 149
KL + G+K KVL +W + + G ++ F+ G+
Sbjct: 94 KLKKLTGVKVKVLFLWLNIVEVIRNGDEMEFSVGI 128
>AT3G07470.1 | chr3:2387291-2388343 REVERSE LENGTH=170
Length = 169
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 62/117 (52%), Gaps = 7/117 (5%)
Query: 56 DLLKEYDMPAGLFPRDATNYEFNEETKKLTVYIPSACDVGYKDSSVLRFFTCVTGYLEKG 115
++L +P+G+FP+ + F+ ET + +VY+ AC+ Y+ + + +TG +
Sbjct: 33 EILLANGLPSGIFPKGVREFTFDVETGRFSVYLNQACEAKYETE--IHYDANITGTIGSA 90
Query: 116 KLSDIEGLKTK-VLVWTKVTAIKTE---GSKVHFTAG-VKKTRSRDAYEVVRDGIPI 167
++SD+ G+ + + +W V I+ + ++F G V+K S +E RD +P+
Sbjct: 91 QISDLSGISAQELFLWFPVKGIRVDVPSSGLIYFDVGVVRKQYSLSLFETPRDCVPV 147
>AT4G02360.1 | chr4:1041179-1041643 FORWARD LENGTH=155
Length = 154
Score = 56.6 bits (135), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 52/99 (52%), Gaps = 2/99 (2%)
Query: 56 DLLKEYDMPAGLFPRDATNYEFNEETKKLTVYIPSACDVGYKDSSVLRFFTCVTGYLEKG 115
D +K Y++P G+ P+ +YE N +T VY C+ + S L++ + ++G + G
Sbjct: 31 DAVKLYNLPPGILPKGVVDYELNPKTGNFKVYFNDTCEFTIQ-SYQLKYKSTISGVISPG 89
Query: 116 KLSDIEGLKTKVL-VWTKVTAIKTEGSKVHFTAGVKKTR 153
+ +++G+ KVL W + + +G+ + F+ G+
Sbjct: 90 HVKNLKGVSVKVLFFWVNIAEVSLDGADLDFSVGIASAS 128
>AT3G07460.2 | chr3:2384544-2385617 REVERSE LENGTH=272
Length = 271
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 60/122 (49%), Gaps = 7/122 (5%)
Query: 51 QKALPDLLKEYDMPAGLFPRDATNYEFNEETKKLTVYIPSACDVGYKDSSVLRFFTCVTG 110
+++ ++L +P GLFP+ + N ET + +VY+ +C Y+ L + V+G
Sbjct: 27 NESIDEILLANGLPLGLFPKGVKGFTVNGETGRFSVYLNQSCQAKYETE--LHYDEIVSG 84
Query: 111 YLEKGKLSDIEGLKTK-VLVWTKVTAIKTE---GSKVHFTAGV-KKTRSRDAYEVVRDGI 165
+ ++ D+ G+ + + +W +V I+ + + F GV +K S +E RD +
Sbjct: 85 TIGYAQIRDLSGISAQELFLWLQVKGIRVDVPSSGLIFFDVGVLRKQYSLSLFETPRDCV 144
Query: 166 PI 167
+
Sbjct: 145 AV 146
>AT1G55265.1 | chr1:20617326-20617853 FORWARD LENGTH=176
Length = 175
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 56/110 (50%), Gaps = 6/110 (5%)
Query: 56 DLLKEYDMPAGLFPRDATNYEFNEETKKLTVYIPSACDVGYKDSSVLRFFTCVTGYLEKG 115
DLL Y P GL P + +Y +++ TV + S+C V + D V + + G L G
Sbjct: 56 DLLPRYGFPKGLLPNNVKSYTISDD-GDFTVDLISSCYVKFSDQLVF-YGKNIAGKLSYG 113
Query: 116 KLSDIEGLKTK-VLVWTKVTAIKTEGSK--VHFTAG-VKKTRSRDAYEVV 161
+ D+ G++ K +W +TA++++ S V F+ G V KT +E V
Sbjct: 114 SVKDVRGIQAKEAFLWLPITAMESDPSSATVVFSVGFVSKTLPASMFENV 163
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.317 0.134 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,229,948
Number of extensions: 118037
Number of successful extensions: 277
Number of sequences better than 1.0e-05: 12
Number of HSP's gapped: 276
Number of HSP's successfully gapped: 12
Length of query: 170
Length of database: 11,106,569
Length adjustment: 91
Effective length of query: 79
Effective length of database: 8,611,713
Effective search space: 680325327
Effective search space used: 680325327
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 108 (46.2 bits)