BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os05g0345400 Os05g0345400|AK073748
         (1016 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G58450.1  | chr5:23626826-23632071 FORWARD LENGTH=1066         979   0.0  

>AT5G58450.1 | chr5:23626826-23632071 FORWARD LENGTH=1066
          Length = 1065

 Score =  979 bits (2530), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 514/1016 (50%), Positives = 689/1016 (67%), Gaps = 48/1016 (4%)

Query: 1    MASKFGLAGGIPERRVRPIWDAVDSRQYXXXXXXXXXXXXXHPTSPYVLALKGLILERMG 60
            M+SKFGLAGGIPERRVRPIWDA+DSRQ+             +P SPY LALK LI ERMG
Sbjct: 64   MSSKFGLAGGIPERRVRPIWDAIDSRQFKNALKLVTSLLAKYPKSPYALALKALIHERMG 123

Query: 61   KPDEALSVCLNAKEQLYSDNIFHFDDLTLSTLQIVFQRLERLDLATSCYEYACTKYPNNL 120
            K DEALSVCL+AKE LY D++   DDLTLSTLQIV QRL+ LDLATSCY +AC KYPNNL
Sbjct: 124  KTDEALSVCLDAKELLYKDDLALMDDLTLSTLQIVLQRLDHLDLATSCYAHACGKYPNNL 183

Query: 121  ELMMGLFNCYVREYSYVKQQHTAIKMYKTVGEERFLLWAICSIQLQVHFSIGGXXXXXXX 180
            ELMMGLFNCYVREYS+VKQQ TAIKMYK  GEERFLLWA+CSIQLQV     G       
Sbjct: 184  ELMMGLFNCYVREYSFVKQQQTAIKMYKLAGEERFLLWAVCSIQLQVLCDKSGEKLLLLA 243

Query: 181  XXXXXXHITSHSLHEPEALALYISILEQQSKYDAALEVLSGDLGSLMGREEDKLRLQGRL 240
                  HI SHS+HEPEAL +YIS+LEQQSKY+ ALEVLSGDLGSL+  E DKLR+QGRL
Sbjct: 244  EGLLKKHIASHSMHEPEALMVYISLLEQQSKYNDALEVLSGDLGSLLMIEVDKLRIQGRL 303

Query: 241  LAQACNYTAASEIYQKILESCPDDWESFLHYLGCLLEHDV------NLPKSRTSEHPSSL 294
            LA+A +Y+AA ++Y+KILE  PDDWE FLHYLGCLLE D       N+ +   ++H    
Sbjct: 304  LARANDYSAAVDVYKKILELSPDDWECFLHYLGCLLEDDSIWKYFDNIDQIHPTKH---- 359

Query: 295  PVDSALALKTS-LSDELVESRLASALSFVQKLQVNDTSDCVRGPHLASIEIERQRCRSGN 353
                 +  K S L++E+ +SR++SA   VQKLQ +  +  +RGP+LA +EIE+++   G 
Sbjct: 360  -----IECKFSHLTEEMFDSRISSASDLVQKLQRDAENSNLRGPYLAELEIEKRKFLFGK 414

Query: 354  PTDRKFIEALINYFHRFGHLSCAASDVEIYLHMLSSDETTELLDTISRSFDASSLSVKGL 413
              + K +E+L+ YF +FGHL+C ASDVE YL +LS ++    ++ + ++ D+S+ + K L
Sbjct: 415  KNEDKLLESLLQYFLKFGHLACYASDVEAYLQVLSPNKKAGFVEMLVKNSDSSASATKVL 474

Query: 414  GLAITTFKVQELLGTFFSKSTTELQHIAKGMVEAFYKNLPLSRDLDPQESMHGEELLCMA 473
            G   T  KVQEL G  F   T E++  A  + + + +NL LS+DLDPQESM GEELL + 
Sbjct: 475  GQTTTILKVQELTGNIFGLPTDEIEASAVKLAKLYCQNLSLSKDLDPQESMFGEELLSLI 534

Query: 474  SSILVQLFWRTRNLGYLIEAILVLEFGLTVRKYVWQYKVMLVHLYSYLGALPLAHRWYVT 533
            S++LVQLFWRTR+ GYL EAI+VLE GLT+R +VWQYK++L+H+YSY+GALPLA   Y  
Sbjct: 535  SNMLVQLFWRTRDFGYLAEAIMVLELGLTIRGHVWQYKILLLHIYSYVGALPLAFERYKA 594

Query: 534  LEVKNILLESASHHILPQMLNSPLLQQTADLVKDYLKFMDDHLKESADLTCLAYRHRTYS 593
            L+VKNIL E+ SHHIL QML SP+    ++L+KDYLKFMDDHL+ESADLT LAYRHR YS
Sbjct: 595  LDVKNILTETVSHHILRQMLESPMWVDLSNLLKDYLKFMDDHLRESADLTFLAYRHRNYS 654

Query: 594  KVIEFVQFKERLQHSMQYLSVRSDSIILSLKQKAESLDEVESILENVNHGARLVELSNED 653
            KVIEFV FK+RLQHS QY + R ++ +L LKQ A+S +E E ILEN+  G +LVELSNE 
Sbjct: 655  KVIEFVLFKQRLQHSNQYQAARVEASVLQLKQNADSFEEEERILENLKSGVQLVELSNEI 714

Query: 654  NVKRFTFNEDLQARPWWTPTTSVNFLSEPFDEGSTPACFRAKACEHKSTEKDDSKIKYAE 713
              +   FNED+Q RPWWTP    N+L  PF+E S          E+   E++++  +  +
Sbjct: 715  GSRTLKFNEDMQTRPWWTPCPEKNYLLGPFEEISY-----CPPKENVKEEREENMKRAIQ 769

Query: 714  RKALLPRLVYLSMHGCASSLRET-QLNGSGLDTDAT-EMKPLLLKYARSIGYSIDDALSV 771
            RK+LLPR++YLS+    ++L+E+ + NGSG D D   E+K LL  Y + +G S+ DA+ +
Sbjct: 770  RKSLLPRMIYLSIQCTPTALKESVETNGSGGDIDVCEELKCLLEDYTKMLGCSLSDAVEM 829

Query: 772  ILGMSSGKKSVKDFTPDIVSWMSFAVFINAWNLWSNESVVPRADESSPSSWQIVDSLVKI 831
            I  +S G ++ +    ++V W++FAVF NAW+L            SS   W +++SL   
Sbjct: 830  ITEISQGARTSESLGSNLVDWLNFAVFWNAWSL------------SSQEHWHVLNSL--- 874

Query: 832  CVEEQLIDANRILTSPG-----NNIPVLVQMITEPISWHLVVIQSCVRSMAPQXXXXXXX 886
              E  ++D  R + S       +++ VLVQ+ITEP++WH ++IQ+C RS  P        
Sbjct: 875  -FERLILDRVRSMGSSDMSSCYSDVQVLVQIITEPLAWHSLIIQACTRSSLPSGKKKKKN 933

Query: 887  XPSER-PNVPRLQAIQRSVQCMIDTLRSVQSWLSDQM-RPEEQALDILLSYLQ-GGNEDG 943
              S++  + P  QAI+ S+Q +  T++ V +WL +Q+  PE+  ++  L+ L+  GN  G
Sbjct: 934  QHSDQLSSSPISQAIKDSIQLLCSTIQDVSNWLLNQLNNPEDGQVEGFLTTLKRDGNAAG 993

Query: 944  PGQISCILEEN-SARHNPELGERIAQSLETWSSAGVVRRIVGAEKELLVELKKICD 998
            PGQI  +LE   ++    E+G RI Q+L++W++A   R+ V A++ +L E  +IC+
Sbjct: 994  PGQILGVLESFIASSEESEVGNRIFQALKSWNTADTARKTVMAQQRVLREFLQICE 1049



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.319    0.133    0.392 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 20,666,708
Number of extensions: 843420
Number of successful extensions: 2341
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 2334
Number of HSP's successfully gapped: 1
Length of query: 1016
Length of database: 11,106,569
Length adjustment: 108
Effective length of query: 908
Effective length of database: 8,145,641
Effective search space: 7396242028
Effective search space used: 7396242028
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 117 (49.7 bits)