BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0269800 Os05g0269800|Os05g0269800
(529 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G41980.1 | chr5:16793765-16794889 FORWARD LENGTH=375 198 7e-51
AT1G43722.1 | chr1:16496403-16497377 FORWARD LENGTH=325 153 2e-37
AT5G28950.1 | chr5:10992505-10993435 FORWARD LENGTH=149 106 3e-23
AT5G35695.1 | chr5:13869120-13869941 FORWARD LENGTH=212 105 7e-23
AT5G28730.1 | chr5:10779003-10780218 FORWARD LENGTH=297 94 3e-19
AT4G10890.1 | chr4:6688833-6692937 FORWARD LENGTH=528 62 1e-09
AT3G55350.1 | chr3:20518518-20520690 FORWARD LENGTH=407 61 2e-09
AT2G24960.1 | chr2:10617263-10620034 FORWARD LENGTH=798 57 2e-08
AT4G02550.3 | chr4:1120622-1121674 REVERSE LENGTH=323 54 2e-07
AT4G02210.1 | chr4:974320-975917 REVERSE LENGTH=440 52 7e-07
>AT5G41980.1 | chr5:16793765-16794889 FORWARD LENGTH=375
Length = 374
Score = 198 bits (503), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 107/241 (44%), Positives = 140/241 (58%), Gaps = 13/241 (5%)
Query: 9 IEDRGLLEDTIHMCIEEQVAMFLHTVGHNLRNRLVRTNYSRSGETVSRYFNKVLHAIGEL 68
++ RGLL T + IE Q+A+FL +GHNLR R V+ + SGET+SR+FN VL+A+ +
Sbjct: 60 LQTRGLLRHTNRIKIEAQLAIFLFIIGHNLRTRAVQELFCYSGETISRHFNNVLNAVIAI 119
Query: 69 RDELIRPPSLDTPTKIAGNPRWDPYFKDCIGAIDGTHIRASVRKNVESSFRGRKSHATQN 128
+ +P S + DPYFKDC+G +D HI V + + FR TQN
Sbjct: 120 SKDFFQPNSNSDTLE-----NDDPYFKDCVGVVDSFHIPVMVGVDEQGPFRNGNGLLTQN 174
Query: 129 VMAAVDFDLRFTYVLAGWEGTAHDAVVLRDALERENGLHVPQGKFYLVDAGYGAKQGFLP 188
V+AA FDLRF YVLAGWEG+A D VL AL R N L VPQGK+Y+VD Y GF+
Sbjct: 175 VLAASSFDLRFNYVLAGWEGSASDQQVLNAALTRRNKLQVPQGKYYIVDNKYPNLPGFIA 234
Query: 189 PFRAVRYHLKEWGNNPVQNEKELFNLRHSSLRITVERAFGSLKRRFKVLDDATPFFPFRT 248
P+ V N + KE+FN RH L + R FG+LK RF +L A P +P +T
Sbjct: 235 PYHGV-------STNSREEAKEMFNERHKLLHRAIHRTFGALKERFPILLSAPP-YPLQT 286
Query: 249 Q 249
Q
Sbjct: 287 Q 287
>AT1G43722.1 | chr1:16496403-16497377 FORWARD LENGTH=325
Length = 324
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/232 (37%), Positives = 133/232 (57%), Gaps = 11/232 (4%)
Query: 15 LEDTIHMCIEEQVAMFLHTVGHNLRNRLVRTNYSRSGETVSRYFNKVLHAIGELRDELIR 74
L+ T+++ IEE VAMFL GHN R V + R+ ETV R F +VL A L + IR
Sbjct: 90 LQPTLNISIEESVAMFLRICGHNEVYRDVGLRFGRNQETVQRKFREVLTATELLACDYIR 149
Query: 75 PPSLD----TPTKIAGNPRWDPYFKDCIGAIDGTHIRASVRKNVESSFRGRKSHATQNVM 130
P+ P ++ + R+ PYF +GA+DGTH+ V+ +++ + R +A+ N+M
Sbjct: 150 TPTRQELYRIPERLQVDQRYWPYFSGFVGAMDGTHVCVKVKPDLQGMYWNRHDNASLNIM 209
Query: 131 AAVDFDLRFTYVLAGWEGTAHDAVVLRDALERENGLHVPQG-KFYLVDAGYGAKQGFLPP 189
A D + FTY+ G G+ +D VL+ A + ++ +P K+YLVD+GY KQG L P
Sbjct: 210 AICDLKMLFTYIWNGAPGSCYDTAVLQIAQQSDSEFPLPPSEKYYLVDSGYPNKQGLLAP 269
Query: 190 FRA-----VRYHLKEWGNNP-VQNEKELFNLRHSSLRITVERAFGSLKRRFK 235
+R+ VRYH+ ++ P +N+ ELFN H+SLR +ER F K + +
Sbjct: 270 YRSSRNRVVRYHMSQFYYGPRPRNKHELFNQCHTSLRSVIERTFRIWKNKME 321
>AT5G28950.1 | chr5:10992505-10993435 FORWARD LENGTH=149
Length = 148
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 64/95 (67%), Gaps = 1/95 (1%)
Query: 76 PSLDTPTKIAGNPRWDPYFKDCIGAIDGTHIRASVRKNVESSFRGRKSHATQNVMAAVDF 135
P + P KI + R PYFKDC+GAID THI A V + SFR RK +QN++AA +F
Sbjct: 4 PEIAVPRKIRESTRLYPYFKDCVGAIDDTHIFAMVSQKKMPSFRNRKGDISQNMLAACNF 63
Query: 136 DLRFTYVLAGWEGTAHDAVVLRDALER-ENGLHVP 169
D+ F YVL+GWEG+AHD+ VL DAL R N L VP
Sbjct: 64 DVEFMYVLSGWEGSAHDSKVLNDALTRNSNRLPVP 98
>AT5G35695.1 | chr5:13869120-13869941 FORWARD LENGTH=212
Length = 211
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 55/107 (51%), Positives = 64/107 (59%), Gaps = 12/107 (11%)
Query: 139 FTYVLAGWEGTAHDAVVLRDALERENGLHVPQGKFYLVDAGYGAKQGFLPPFRAVRYHLK 198
F YVL+GWEG+AHD+ VL DAL KFYLVD G+ + FL PFR VRYHL+
Sbjct: 25 FIYVLSGWEGSAHDSRVLSDALR----------KFYLVDCGFANRLNFLAPFRGVRYHLQ 74
Query: 199 EWGNNPVQNEK--ELFNLRHSSLRITVERAFGSLKRRFKVLDDATPF 243
E+ E ELFNLRH SLR +ER FG K RF + A PF
Sbjct: 75 EFAGQRRDPETPHELFNLRHVSLRNVIERIFGIFKSRFAIFKSAPPF 121
>AT5G28730.1 | chr5:10779003-10780218 FORWARD LENGTH=297
Length = 296
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 88/182 (48%), Gaps = 29/182 (15%)
Query: 15 LEDTIHMCIEEQVAMFLHTVGHNLRNRLVRTNYSRSGETVSRYFNKVLHAIGELRDELIR 74
L+ + ++ ++E VA+FL N R + + + ET+ R F+ VL A+ L E IR
Sbjct: 48 LQSSTNISLDESVAIFLIICASNDTQRDIALRFGHAQETIWRKFHDVLKAMERLAVEYIR 107
Query: 75 PPSLD----TPTKIAGNPRWDPYFKDCIGAIDGTHIRASVRKNVESSFRGRKSHATQNVM 130
P ++ ++ + R+ P+ D +G A+ NV+
Sbjct: 108 PRKVEELRAISNRLQDDTRYWPFLMDLLGI------------------------ASFNVL 143
Query: 131 AAVDFDLRFTYVLAGWEGTAHDAVVLRDALERENGLHV-PQGKFYLVDAGYGAKQGFLPP 189
A D D+ FTY G G+ HDA VL A+ + HV P K+YLVD+GY K+G+L P
Sbjct: 144 AICDLDMLFTYCFVGMAGSTHDARVLSAAISDDPLFHVPPDSKYYLVDSGYANKRGYLAP 203
Query: 190 FR 191
+R
Sbjct: 204 YR 205
>AT4G10890.1 | chr4:6688833-6692937 FORWARD LENGTH=528
Length = 527
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 2/91 (2%)
Query: 150 AHDAVVLRDALEREN-GLHVPQGKFYLVDAGYGAKQGFLPPFRAVRYHLKEWGN-NPVQN 207
+HD VL+ E+ H K+YLV++ Y G+L P R + YHL ++G P
Sbjct: 71 SHDTKVLKYCARNESFSPHPSNRKYYLVNSVYPTTTGYLGPHRRILYHLGQFGRGGPPVT 130
Query: 208 EKELFNLRHSSLRITVERAFGSLKRRFKVLD 238
+ELFN +H LR ++R FG K ++++LD
Sbjct: 131 VQELFNRKHLDLRSVIDRTFGVWKAKWRILD 161
>AT3G55350.1 | chr3:20518518-20520690 FORWARD LENGTH=407
Length = 406
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 109/241 (45%), Gaps = 42/241 (17%)
Query: 21 MCIEEQVAMFLHTVGHNLRNRLVRTNYSRSGETVSRYFNKVLHAIGELR-DELIRPPSLD 79
+ + ++VA+ L +G ++ + + TVS+ + + ++ E L P LD
Sbjct: 109 LSLNDRVAVALRRLGSGESLSVIGETFGMNQSTVSQITWRFVESMEERAIHHLSWPSKLD 168
Query: 80 TPT----KIAGNPRWDPYFKDCIGAIDGTHIRASVRKNVESS----FRGRKSHATQNVMA 131
KI+G P +C GAID THI ++ VE S G K+ + + A
Sbjct: 169 EIKSKFEKISGLP-------NCCGAIDITHIVMNL-PAVEPSNKVWLDGEKNF-SMTLQA 219
Query: 132 AVDFDLRFTYVLAGWEGTAHDAVVLRDA--------LERENGLHVP-----QGKFYLV-D 177
VD D+RF V+AGW G+ +D VVL+++ +R NG +P + + Y+V D
Sbjct: 220 VVDPDMRFLDVIAGWPGSLNDDVVLKNSGFYKLVEKGKRLNGEKLPLSERTELREYIVGD 279
Query: 178 AGYGAKQGFLPPFRAVRYHLKEWGNNPVQNEKELFNLRHSSLRITVERAFGSLKRRFKVL 237
+G+ L P++ P + FN RHS + A LK R++++
Sbjct: 280 SGFPLLPWLLTPYQG----------KPTSLPQTEFNKRHSEATKAAQMALSKLKDRWRII 329
Query: 238 D 238
+
Sbjct: 330 N 330
>AT2G24960.1 | chr2:10617263-10620034 FORWARD LENGTH=798
Length = 797
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 65/154 (42%), Gaps = 1/154 (0%)
Query: 251 MDNNSGKGGSTHASWTSAMSSFMLSHLANVVAGGTRTSSGFKAVHLNACARAVNERFNST 310
M N + T WT M F + + + G RT F N N +F S
Sbjct: 1 MSNQTTCNDRTRTYWTPTMERFFIDLMLEHLHRGNRTGHTFNKQAWNEMLTVFNSKFGSQ 60
Query: 311 LTGEQIKNHLKTWQRKFSKINRLRKVSAAGWDEKNFIITLDDEHYNGYTEDHKADADYFN 370
+ +K+ ++++ + L WD+ + + DD ++ Y + H Y
Sbjct: 61 YDKDVLKSRYTNLWKQYNDVKCLLDHGGFVWDQTHQTVIGDDSLWSLYLKAHPEARVYKT 120
Query: 371 KPLAHYGEMLTIFGSTMATGKYAKDSSSVLGTED 404
KP+ ++ ++ I+G T+A G+Y+ SS L ED
Sbjct: 121 KPVLNFSDLCLIYGYTVADGRYSM-SSHDLEIED 153
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 60/152 (39%), Gaps = 1/152 (0%)
Query: 255 SGKGGSTHASWTSAMSSFMLSHLANVVAGGTRTSSGFKAVHLNACARAVNERFNSTLTGE 314
SGK S+ WT M + + + + + G +T + F N RF+
Sbjct: 163 SGKE-SSKTEWTLEMDQYFVEIMVDQIGRGNKTGNAFSKQAWIDMLVLFNARFSGQYGKR 221
Query: 315 QIKNHLKTWQRKFSKINRLRKVSAAGWDEKNFIITLDDEHYNGYTEDHKADADYFNKPLA 374
+++ + + + + K WDE +I+ DD ++ Y +DH Y K L
Sbjct: 222 VLRHRYNKLLKYYKDMEAILKEDGFSWDETRLMISADDAVWDSYIKDHPLARTYRMKSLP 281
Query: 375 HYGEMLTIFGSTMATGKYAKDSSSVLGTEDVQ 406
Y ++ TIF G +D S T + +
Sbjct: 282 SYNDLDTIFACQAEQGTDHRDDGSAAQTSETK 313
>AT4G02550.3 | chr4:1120622-1121674 REVERSE LENGTH=323
Length = 322
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 112/309 (36%), Gaps = 38/309 (12%)
Query: 244 FPFRTQEMDNNSGKGGSTHASWTSAMSSFMLSHLANVVAGGTRTSSGFKAVHLNACARAV 303
P +EM K + W+ M ++ LA G + F A AV
Sbjct: 21 IPVERKEM-----KHKGRNVIWSVGMDKCLIEALAVQAKNGNKVDKCFNDKAYTAACVAV 75
Query: 304 NERFNSTLTGEQIKNHLKTWQRKFSKINRLRKVSAAGWDEKNFIITLD-DEHYNGYTEDH 362
N RFN LT ++ N LKT ++++ + + W+ +I + DE + Y +
Sbjct: 76 NTRFNLNLTSQKAINRLKTIKKRYRVMRDILSRDGFWWNSSTKMIDCESDELWRRYIAVN 135
Query: 363 KADADYFNKPLAHYGEMLTIFGSTMATGKY---AKDSSSVLGTEDVQXXXXXXXXGP--- 416
+ K + Y E+ T+ G GKY K+SS L DV+ P
Sbjct: 136 PDAKAFRGKQIEMYEELRTVCGDYQTPGKYNKVKKESSHHLN--DVKQFEEDSVSFPLGS 193
Query: 417 ----ATTDDRXXXXXXXXXXXXXTQENEDDGLIGAFTSV----GDKLASAILKVAEPDNK 468
+ TD +Q+ S D A+L VA +
Sbjct: 194 SEEHSDTDGTESYAGASEYMHEESQDLPPPRDPLRRPSKRSRNSDPCQEAMLVVASSIRR 253
Query: 469 LP------------EGLFDTLKTLPGFEEVHRLFYYAHLVANPHIARAFDGLSFENKMHW 516
L E L + + EE +++ + +L +P ARAF +++ N+M
Sbjct: 254 LADAVVQSKTLINTEELLKAVMEIDELEEAKQMYAFEYLNGDPVKARAF--MAYNNRMR- 310
Query: 517 FAMFISEKF 525
MF+ +F
Sbjct: 311 -KMFLFRQF 318
>AT4G02210.1 | chr4:974320-975917 REVERSE LENGTH=440
Length = 439
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/136 (18%), Positives = 58/136 (42%), Gaps = 3/136 (2%)
Query: 254 NSGKGGS---THASWTSAMSSFMLSHLANVVAGGTRTSSGFKAVHLNACARAVNERFNST 310
++ KG S +W M + + + + G + F+ N +F S
Sbjct: 172 SNSKGSSVTRCRTTWHPPMDRYFIDLMLDQARRGNQIEGVFRKQAWTEMVNLFNAKFESN 231
Query: 311 LTGEQIKNHLKTWQRKFSKINRLRKVSAAGWDEKNFIITLDDEHYNGYTEDHKADADYFN 370
+ +KN K+ +R+F+ I + + WD + ++T D+ + Y + H+ +
Sbjct: 232 FDVDVLKNRYKSLRRQFNAIKSILRSDGFAWDNERQMVTADNNVWQDYIKAHRDARQFMT 291
Query: 371 KPLAHYGEMLTIFGST 386
+P+ +Y ++ + G +
Sbjct: 292 RPIPYYKDLCVLCGDS 307
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.135 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 11,544,961
Number of extensions: 484786
Number of successful extensions: 1042
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 1032
Number of HSP's successfully gapped: 12
Length of query: 529
Length of database: 11,106,569
Length adjustment: 103
Effective length of query: 426
Effective length of database: 8,282,721
Effective search space: 3528439146
Effective search space used: 3528439146
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 114 (48.5 bits)