BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os05g0263200 Os05g0263200|Os05g0263200
         (284 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done

 ***** No hits found ******


  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.308    0.123    0.332 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,918,574
Number of extensions: 113671
Number of successful extensions: 334
Number of sequences better than 1.0e-05: 0
Number of HSP's gapped: 334
Number of HSP's successfully gapped: 0
Length of query: 284
Length of database: 11,106,569
Length adjustment: 97
Effective length of query: 187
Effective length of database: 8,447,217
Effective search space: 1579629579
Effective search space used: 1579629579
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 111 (47.4 bits)