BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os05g0247900 Os05g0247900|AK071717
         (856 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G03750.1  | chr1:937920-941068 FORWARD LENGTH=863             1012   0.0  
AT3G19210.1  | chr3:6652799-6658876 REVERSE LENGTH=911            268   1e-71
AT5G63950.1  | chr5:25592160-25598405 REVERSE LENGTH=1091         246   3e-65
AT3G54280.2  | chr3:20092361-20104153 FORWARD LENGTH=2130         218   2e-56
AT1G08600.3  | chr1:2724562-2733431 FORWARD LENGTH=1480           215   8e-56
AT4G31900.1  | chr4:15431528-15438443 FORWARD LENGTH=1203         214   2e-55
AT2G02090.1  | chr2:523481-526884 FORWARD LENGTH=764              184   1e-46
AT2G18760.1  | chr2:8129154-8133502 FORWARD LENGTH=1188           176   4e-44
AT5G19310.1  | chr5:6498906-6503432 FORWARD LENGTH=1065           145   1e-34
AT3G12810.1  | chr3:4065636-4073992 FORWARD LENGTH=2056           138   1e-32
AT3G06010.1  | chr3:1802435-1807284 REVERSE LENGTH=1103           135   9e-32
AT5G66750.1  | chr5:26649050-26652869 FORWARD LENGTH=765          132   6e-31
AT2G13370.1  | chr2:5544601-5555543 REVERSE LENGTH=1725           127   3e-29
AT2G28290.1  | chr2:12056771-12072950 FORWARD LENGTH=3575         126   6e-29
AT3G06400.3  | chr3:1941066-1946700 FORWARD LENGTH=1058           124   2e-28
AT5G18620.2  | chr5:6196190-6202058 REVERSE LENGTH=1073           122   8e-28
AT2G25170.1  | chr2:10714411-10723763 FORWARD LENGTH=1385         122   1e-27
AT2G46020.2  | chr2:18923304-18931769 FORWARD LENGTH=2194         117   3e-26
AT5G44800.1  | chr5:18083659-18092162 REVERSE LENGTH=2224         115   1e-25
AT1G02670.1  | chr1:576046-580299 FORWARD LENGTH=679              114   2e-25
AT3G57300.2  | chr3:21199612-21207635 FORWARD LENGTH=1541         114   3e-25
AT2G44980.2  | chr2:18552343-18556669 REVERSE LENGTH=878          101   2e-21
AT5G43530.1  | chr5:17489327-17494830 FORWARD LENGTH=1278         100   6e-21
AT3G42670.1  | chr3:14755906-14760085 REVERSE LENGTH=1257          99   7e-21
AT3G20010.1  | chr3:6971352-6976340 FORWARD LENGTH=1048            97   3e-20
AT3G16600.1  | chr3:5652839-5655670 REVERSE LENGTH=639             97   5e-20
AT5G22750.1  | chr5:7565374-7570871 REVERSE LENGTH=1030            96   6e-20
AT1G50410.1  | chr1:18672828-18677365 FORWARD LENGTH=982           96   1e-19
AT1G11100.2  | chr1:3703934-3709302 REVERSE LENGTH=1270            94   3e-19
AT1G61140.1  | chr1:22535038-22540610 REVERSE LENGTH=1281          93   8e-19
AT1G05490.1  | chr1:1618795-1623195 REVERSE LENGTH=1411            92   1e-18
AT5G05130.1  | chr5:1512173-1514918 FORWARD LENGTH=863             89   8e-18
AT1G05120.1  | chr1:1471624-1476067 REVERSE LENGTH=834             85   2e-16
AT1G48310.1  | chr1:17848620-17853731 REVERSE LENGTH=674           84   3e-16
AT3G24340.1  | chr3:8832085-8835722 REVERSE LENGTH=1133            80   5e-15
AT2G21450.1  | chr2:9179622-9182356 REVERSE LENGTH=817             74   3e-13
AT2G16390.1  | chr2:7097638-7101182 FORWARD LENGTH=889             74   4e-13
AT5G20420.1  | chr5:6899015-6903266 REVERSE LENGTH=1262            72   1e-12
AT5G07810.1  | chr5:2491412-2498484 REVERSE LENGTH=1191            72   1e-12
AT2G40770.1  | chr2:17013535-17021315 REVERSE LENGTH=1665          60   5e-09
>AT1G03750.1 | chr1:937920-941068 FORWARD LENGTH=863
          Length = 862

 Score = 1012 bits (2616), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 477/757 (63%), Positives = 593/757 (78%), Gaps = 10/757 (1%)

Query: 100 ASLDSRGPYEPLALSPPGERPVVQVPSSINCRLLVHQRDGVRFLYNLYRNNHGGVLGDDM 159
           A  D  GPYEPL LS  GE P++ VP+SINCRLL HQR+GV+F+YNLY+NNHGG+LGDDM
Sbjct: 107 AEFDYSGPYEPLMLSSIGEIPIIHVPASINCRLLEHQREGVKFMYNLYKNNHGGILGDDM 166

Query: 160 GLGKTIQTIAFLSAVIGKDNDHGDQLVEGRKIAPILILCPTSVIRNWENEFAEWARC-SV 218
           GLGKTIQTIAFL+AV GKD D G+  +      P+LI+CP+S+I NWE+EF+ WA    V
Sbjct: 167 GLGKTIQTIAFLAAVYGKDGDAGESCLLESDKGPVLIICPSSIIHNWESEFSRWASFFKV 226

Query: 219 AVYHGPNRDLVLQKVETQRLEIVITSFDTFRIHGKILCGISWDLVVVDEAHRLKNEKSKL 278
           +VYHG NRD++L+K++ + +E+++TSFDTFRI G +L GI+W++V+ DEAHRLKNEKSKL
Sbjct: 227 SVYHGSNRDMILEKLKARGVEVLVTSFDTFRIQGPVLSGINWEIVIADEAHRLKNEKSKL 286

Query: 279 YTACLEITTRKRFGLTGTIMQNKIMELFNLFDWIVPGCLGDREHFRVYYDEPLKHGQRFS 338
           Y ACLEI T+KR GLTGT+MQNKI ELFNLF+W+ PG LG REHFR +YDEPLK GQR +
Sbjct: 287 YEACLEIKTKKRIGLTGTVMQNKISELFNLFEWVAPGSLGTREHFRDFYDEPLKLGQRAT 346

Query: 339 APERFVQVADKRKKHLVSVLSKFLLRRTKEETIGHLMLGKEDNIVFCRMSDVQKRVYRRM 398
           APERFVQ+ADKRK+HL S+L K++LRRTKEETIGHLM+GKEDN+VFC+MS +Q+RVY+RM
Sbjct: 347 APERFVQIADKRKQHLGSLLRKYMLRRTKEETIGHLMMGKEDNVVFCQMSQLQRRVYQRM 406

Query: 399 LQQPDVQILINKDLPCSCGSPLTQVECCKRTEPHGIIWSYLHRDNPEGCSLCPFCLVLPC 458
           +Q P++Q L+NKD PC+CGSPL Q ECC+R  P G IWSYLHRDN +GC  CPFCLVLPC
Sbjct: 407 IQLPEIQCLVNKDNPCACGSPLKQSECCRRIVPDGTIWSYLHRDNHDGCDSCPFCLVLPC 466

Query: 459 LGKLQQISNHLELIKPNLKDEIEKQKKDAELAAAVFDTDIELVGGGAKSENFMGLSDAEH 518
           L KLQQISNHLELIKPN KDE EKQKKDAE  + VF TDI+L+GG + S++FM LSD +H
Sbjct: 467 LMKLQQISNHLELIKPNPKDEPEKQKKDAEFVSTVFGTDIDLLGGISASKSFMDLSDVKH 526

Query: 519 CGKMRALERLLSLWTLQGDKILLFSYSVRMLDILEKFLIRKGYCFSRFDGTTPMNARQLL 578
           CGKMRALE+L++ W  +GDKILLFSYSVRMLDILEKFLIRKGY F+R DG+TP N RQ L
Sbjct: 527 CGKMRALEKLMASWISKGDKILLFSYSVRMLDILEKFLIRKGYSFARLDGSTPTNLRQSL 586

Query: 579 IDEFNRCPSKQVFLISTRAGNLGVNLVSANRVVIFDPSWNPAQDLQAQDRSFRFGQRRHV 638
           +D+FN  PSKQVFLIST+AG LG+NLVSANRVVIFDP+WNP+ DLQAQDRSFR+GQ+RHV
Sbjct: 587 VDDFNASPSKQVFLISTKAGGLGLNLVSANRVVIFDPNWNPSHDLQAQDRSFRYGQKRHV 646

Query: 639 TVFRLLGAGSLEELIYSRQIYKQQLSNIAVSGKIEKRYFEGVQDDKKFQGELFGICNLFR 698
            VFRLL AGSLEEL+Y+RQ+YKQQLSNIAV+GK+E RYFEGVQD K+FQGELFGI NLFR
Sbjct: 647 VVFRLLSAGSLEELVYTRQVYKQQLSNIAVAGKMETRYFEGVQDCKEFQGELFGISNLFR 706

Query: 699 DLSDKLFTSEIIEMHGEHGKGNTAETIGIREIVDTNIFGTQDQMKSSMTAIHN---ENKN 755
           DLSDKLFTS+I+E+H    + +  +    R +++T +  ++D+ +  +   +    E   
Sbjct: 707 DLSDKLFTSDIVELH----RDSNIDENKKRSLLETGV--SEDEKEEEVMCSYKPEMEKPI 760

Query: 756 LYHCGIVYAHRNEDVVNTRTNEASNCAEDKTVPRHLEELQSKKNETMHTIKAKSYSLVQK 815
           L   GIVYAHRNED++N      S            +  + K+          S +  QK
Sbjct: 761 LKDLGIVYAHRNEDIINIGETTTSTSQRLNGDGNSADRKKKKRKGCSEEEDMSSSNREQK 820

Query: 816 KKEFSRIASFMGMNDLEFSKWLLSVSPLQRHEVLDRY 852
           ++++  +A F GM  LEFS+W+LS SP  R ++L  +
Sbjct: 821 REKYKMLAEFKGMEILEFSRWVLSASPFDREKLLQDF 857
>AT3G19210.1 | chr3:6652799-6658876 REVERSE LENGTH=911
          Length = 910

 Score =  268 bits (684), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 188/589 (31%), Positives = 294/589 (49%), Gaps = 89/589 (15%)

Query: 109 EPLALSPPGERPVVQVPSSINCRLLV-----HQRDGVRFLYNLYRNNHGG------VLGD 157
           EPL L    E  +  V + +   +LV     HQR+GV+F+++     HG       +L D
Sbjct: 152 EPLVLWQSEEDGMSNVTTIMVHSVLVKFLRPHQREGVQFMFDCVSGLHGSANINGCILAD 211

Query: 158 DMGLGKTIQTIAFLSAVIGKDNDHGDQLVEGRKIAPILILCPTSVIRNWENEFAEWA--R 215
           DMGLGKT+Q+I  L  ++ +  D G  +V+       +I+ PTS++ NWE E  +W   R
Sbjct: 212 DMGLGKTLQSITLLYTLLCQGFD-GTPMVKK-----AIIVTPTSLVSNWEAEIKKWVGDR 265

Query: 216 CSVAVYHGPNRDLVLQKVET-----QRLEIVITSFDTFRIHGKILC-GISWDLVVVDEAH 269
             +       RD VL  +++       L+++I S++TFR+H    C   S DL++ DEAH
Sbjct: 266 IQLIALCESTRDDVLSGIDSFTRPRSALQVLIISYETFRMHSSKFCQSESCDLLICDEAH 325

Query: 270 RLKNEKSKLYTACLEITTRKRFGLTGTIMQNKIMELFNLFDWIVPGCLGDREHFRVYYDE 329
           RLKN+++    A   +T ++R  L+GT MQN + E F + ++  PG LGD  HFR YY+ 
Sbjct: 326 RLKNDQTLTNRALASLTCKRRVLLSGTPMQNDLEEFFAMVNFTNPGSLGDAAHFRHYYEA 385

Query: 330 PLKHGQRFSAPERFVQVADKRKKHLVSVLSKFLLRRTKEETIGHLMLGKEDNIVFCRMSD 389
           P+  G+  +A E    +A  R   L S +++F+LRRT      HL   K   +V C+M+ 
Sbjct: 386 PIICGREPTATEEEKNLAADRSAELSSKVNQFILRRTNALLSNHLP-PKIIEVVCCKMTT 444

Query: 390 VQKRVYRRMLQQPDVQILINKDLPCSCGSPLTQVECCKRTEPHGIIWSYLHRDNPEGCSL 449
           +Q  +Y   +   +++  +               +  K+T+                   
Sbjct: 445 LQSTLYNHFISSKNLKRAL--------------ADNAKQTK------------------- 471

Query: 450 CPFCLVLPCLGKLQQISNHLELIKPNLKDEIEKQKKDAELAAAVFDTDIELVGGGAKSEN 509
                VL  +  L+++ NH +LI   +        K        F+  +E       +E 
Sbjct: 472 -----VLAYITALKKLCNHPKLIYDTI--------KSGNPGTVGFENCLEFF----PAEM 514

Query: 510 FMGLSDA---------EHCGKMRALERLLS-LWTLQGDKILLFSYSVRMLDILEKFLIRK 559
           F G S A         E  GKM  L RLL+ L     D+I+L S   + LD+  +    +
Sbjct: 515 FSGRSGAWTGGDGAWVELSGKMHVLSRLLANLRRKTDDRIVLVSNYTQTLDLFAQLCRER 574

Query: 560 GYCFSRFDGTTPMNARQLLIDEFNRCPSKQ--VFLISTRAGNLGVNLVSANRVVIFDPSW 617
            Y F R DG+T ++ RQ L++  N  P+K    FL+S++AG  G+NL+ ANR+V+FDP W
Sbjct: 575 RYPFLRLDGSTTISKRQKLVNRLND-PTKDEFAFLLSSKAGGCGLNLIGANRLVLFDPDW 633

Query: 618 NPAQDLQAQDRSFRFGQRRHVTVFRLLGAGSLEELIYSRQIYKQQLSNI 666
           NPA D QA  R +R GQ++ V V+R L  G++EE +Y RQ+ K+ L  +
Sbjct: 634 NPANDKQAAARVWRDGQKKRVYVYRFLSTGTIEEKVYQRQMSKEGLQKV 682
>AT5G63950.1 | chr5:25592160-25598405 REVERSE LENGTH=1091
          Length = 1090

 Score =  246 bits (629), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 168/575 (29%), Positives = 277/575 (48%), Gaps = 75/575 (13%)

Query: 124 VPSSINCRLLVHQRDGVRFLYNLYRNNHGGVLGDDMGLGKTIQTIAFLSAVIGKDNDHGD 183
           +P  I   L  HQR+G+ +L++L+    GG+LGDDMGLGKT+Q  +FL+           
Sbjct: 369 LPGKIATMLYPHQREGLNWLWSLHTQGKGGILGDDMGLGKTMQICSFLAG---------- 418

Query: 184 QLVEGRKIAPILILCPTSVIRNWENEFAEWARCSVA-VYHGPN---RDLVLQKVETQRLE 239
            L   + I   L++ P +++ +W  E A      +   Y+G +   R+  L  +  Q   
Sbjct: 419 -LFHSKLIKRALVVAPKTLLPHWMKELATVGLSQMTREYYGTSTKAREYDLHHI-LQGKG 476

Query: 240 IVITSFDTFRIHGKILCGIS------------WDLVVVDEAHRLKNEKSKLYTACLEITT 287
           I++T++D  R + K L G              WD +++DE H +KN  ++   + LEI +
Sbjct: 477 ILLTTYDIVRNNTKALQGDDHYTDEDDEDGNKWDYMILDEGHLIKNPNTQRAKSLLEIPS 536

Query: 288 RKRFGLTGTIMQNKIMELFNLFDWIVPGCLGDREHFRVYYDEPLKHGQRFSAPERFVQVA 347
             R  ++GT +QN + EL+ LF++  PG LGD+  F+  Y+  +  G   +A +R  ++ 
Sbjct: 537 SHRIIISGTPIQNNLKELWALFNFSCPGLLGDKNWFKQNYEHYILRGTDKNATDREQRIG 596

Query: 348 DKRKKHLVSVLSKFLLRRTKEETIGH----LMLGKEDNI-VFCRMSDVQKRVYRRMLQQP 402
               K+L   +  F LRR K E  G       L K+D I V+ R++  Q+++Y   L   
Sbjct: 597 STVAKNLREHIQPFFLRRLKSEVFGDDGATSKLSKKDEIVVWLRLTACQRQLYEAFLNSE 656

Query: 403 DVQILINKDLPCSCGSPLTQVECCKRTEPHGIIWSYLHRDNPEGCSLCPFCLVLPCLGKL 462
            V       L    GSPL  +   K+   H                        P L   
Sbjct: 657 IV-------LSAFDGSPLAALTILKKICDH------------------------PLLLTK 685

Query: 463 QQISNHLELIKPNLKDEIEKQKKDAELAAAVFDTDIELVGGGAKSENFMGLSDAEHCGKM 522
           +   + LE +   L  E           A V +     +     +++F   +D+  C K+
Sbjct: 686 RAAEDVLEGMDSTLTQE----------EAGVAERLAMHIADNVDTDDFQTKNDSISC-KL 734

Query: 523 RALERLLSLWTLQGDKILLFSYSVRMLDILEKFLIRKGYCFSRFDGTTPMNARQLLIDEF 582
             +  LL     +G ++L+FS + +ML++++  L   GY F R DGTT    R   ++EF
Sbjct: 735 SFIMSLLENLIPEGHRVLIFSQTRKMLNLIQDSLTSNGYSFLRIDGTTKAPDRLKTVEEF 794

Query: 583 NRCPSKQVFLISTRAGNLGVNLVSANRVVIFDPSWNPAQDLQAQDRSFRFGQRRHVTVFR 642
                  +FL++++ G LG+ L  A+RV++ DP+WNP+ D Q+ DR++R GQ + V V+R
Sbjct: 795 QEGHVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQTKDVIVYR 854

Query: 643 LLGAGSLEELIYSRQIYKQQLSNIAVSGKIEKRYF 677
           L+ + ++EE IY +Q+YK  L   A   K + RYF
Sbjct: 855 LMTSATVEEKIYRKQVYKGGLFKTATEHKEQIRYF 889
>AT3G54280.2 | chr3:20092361-20104153 FORWARD LENGTH=2130
          Length = 2129

 Score =  218 bits (554), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 160/571 (28%), Positives = 273/571 (47%), Gaps = 72/571 (12%)

Query: 126  SSINCRLLVHQRDGVRFLYNLYRNNHGGVLGDDMGLGKTIQTIAFLSAVIGKDNDHGDQL 185
            + +  +L  +Q++G+ +L  L R    G+L DDMGLGKT+Q  A +++   +     D+L
Sbjct: 1476 TELKVQLRRYQQEGINWLGFLKRFKLHGILCDDMGLGKTLQASAIVASDAAERRGSTDEL 1535

Query: 186  VEGRKIAPILILCPTSVIRNWENE---FAEWARCSVAVYHGPNRDLVLQKVETQRLEIVI 242
                 + P +I+CP++++ +W  E   + + +  SV  Y G  +D V  + +     ++I
Sbjct: 1536 ----DVFPSIIVCPSTLVGHWAFEIEKYIDLSLLSVLQYVGSAQDRVSLREQFNNHNVII 1591

Query: 243  TSFDTFRIHGKILCGISWDLVVVDEAHRLKNEKSKLYTACLEITTRKRFGLTGTIMQNKI 302
            TS+D  R     L   SW+  ++DE H +KN KSK+  A  ++  + R  L+GT +QN I
Sbjct: 1592 TSYDVVRKDVDYLTQFSWNYCILDEGHIIKNAKSKITAAVKQLKAQHRLILSGTPIQNNI 1651

Query: 303  MELFNLFDWIVPGCLGDREHFRVYYDEPLKHGQRFSAPERFVQVADKRKKHLVSVLSKFL 362
            MEL++LFD+++PG LG    F+  Y +PL   +      +  +      + L   +  FL
Sbjct: 1652 MELWSLFDFLMPGFLGTERQFQASYGKPLLAARDPKCSAKDAEAGVLAMEALHKQVMPFL 1711

Query: 363  LRRTKEETIGHLMLGKEDNIV---FCRMSDVQKRVYRRM---LQQPDVQILINKDLPCSC 416
            LRRTKEE +  L     + I+   +C +S VQ ++Y +      + ++  +I  D     
Sbjct: 1712 LRRTKEEVLSDL----PEKIIQDRYCDLSPVQLKLYEQFSGSSAKQEISSIIKVDGSADS 1767

Query: 417  GSPLTQVECCKRTEPHGIIWSYLHRDNPEGCSLCPFCLVLPCLGKLQQISNHLELIKPNL 476
            G                         N +         V   L  L ++ +H  L+   L
Sbjct: 1768 G-------------------------NADVAPTKASTHVFQALQYLLKLCSHPLLV---L 1799

Query: 477  KDEIEKQKKDAELAAAVFDTDIELVGGGAKSENFMGLSDAEHCGKMRALERLLSLWTLQG 536
             D++  +   ++LAA +             S+    L   +H  K+ AL+ +L    +  
Sbjct: 1800 GDKV-TEPVASDLAAMI----------NGCSDIITELHKVQHSPKLVALQEILEECGIGS 1848

Query: 537  D-------------KILLFSYSVRMLDILEKFLIR---KGYCFSRFDGTTPMNARQLLID 580
            D             ++L+F+    +LDI+EK L +   K   + R DG+     R  ++ 
Sbjct: 1849 DASSSDGTLSVGQHRVLIFAQHKALLDIIEKDLFQAHMKSVTYMRLDGSVVPEKRFEIVK 1908

Query: 581  EFNRCPSKQVFLISTRAGNLGVNLVSANRVVIFDPSWNPAQDLQAQDRSFRFGQRRHVTV 640
             FN  P+  V L++T  G LG+NL SA+ +V  +  WNP +D QA DR+ R GQ+R V V
Sbjct: 1909 AFNSDPTIDVLLLTTHVGGLGLNLTSADTLVFMEHDWNPMRDHQAMDRAHRLGQKRVVNV 1968

Query: 641  FRLLGAGSLEELIYSRQIYKQQLSNIAVSGK 671
             RL+  G+LEE + S Q +K  ++N  ++ +
Sbjct: 1969 HRLIMRGTLEEKVMSLQKFKVSVANTVINAE 1999
>AT1G08600.3 | chr1:2724562-2733431 FORWARD LENGTH=1480
          Length = 1479

 Score =  215 bits (548), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 191/639 (29%), Positives = 301/639 (47%), Gaps = 113/639 (17%)

Query: 95   SLPPAASL----DSRGPYEPLALSPPGERPVVQVPSSINCRLLVHQRDGVRFLY-NLYRN 149
            S+P  A +    D+   Y    +   GE   V+VP SI+ +L VHQ  G+RF++ N+ ++
Sbjct: 679  SIPEGAEVEVLGDAHSGYIVNVVREIGEE-AVRVPRSISAKLKVHQVTGIRFMWENIIQS 737

Query: 150  ---------NHGGVLGDDMGLGKTIQTIAFLSAVIGKDNDHGDQLVE-GRKIAPILILCP 199
                       G +L   MGLGKT Q IAFL   +        + V+ G K A  LI+ P
Sbjct: 738  ISRVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAM--------RCVDLGLKTA--LIVTP 787

Query: 200  TSVIRNWENEFAEWARCSVAVYHGPNRDLVLQKVETQRLEIVIT-----------SFDTF 248
             +V+ NW +EF +W    V     P R  +L  V  +R   ++T            +  F
Sbjct: 788  VNVLHNWRSEFEKWMPSEVK----PLRIFMLGDVSRERRFDLLTKWRKKGGVFLMGYTNF 843

Query: 249  RI-----------HGKILCGI---SWDLVVVDEAHRLKNEKSKLYTACLEITTRKRFGLT 294
            R              + +C       D++V DEAH +KN K+    A  ++  ++R  LT
Sbjct: 844  RNLSLGRGVKDLNAARGICNALRDGPDILVCDEAHIIKNTKADTTQALKQVKCQRRIALT 903

Query: 295  GTIMQNKIMELFNLFDWIVPGCLGDREHFRVYYDEPLKHGQRFSAPERFVQVADKRKKHL 354
            G+ +QN +ME + + D++  G LG    FR  +  P+++GQ  ++    V++ ++R   L
Sbjct: 904  GSPLQNNLMEYYCMVDFVREGFLGSSPEFRNRFQNPIENGQHMNSTAEDVKIMNQRSHIL 963

Query: 355  VSVLSKFLLRRTKEETIGHLMLGKEDNIVFCRMSDVQKRVYRRMLQ-------QPDVQIL 407
               L  F+ +R     +   +  K   ++  ++S +Q+ +Y+R L+       + D ++ 
Sbjct: 964  YEQLKGFV-QRMDMNVVKKDLPPKTVFVISVKLSPLQRILYQRFLELYGFSDGRTDERMR 1022

Query: 408  IN--------KDLPCSCGSPLTQVECCKRTEPHGIIWSYLHRDNPEGCSLCPFCLVLPCL 459
             N          +    G P  + E  K      I+      D P+ CS           
Sbjct: 1023 KNFFAAYQVLAQILNHPGIPQLRSEDSKNGRRGSIV------DIPDDCSSDENIDYNMVT 1076

Query: 460  GKLQQISNHLELIKPNLKDEIEKQKKDAELAAAVFDTDIELVGGGAKSENFMGLSDAEHC 519
            G+ Q+  N L+             K D  L     D  ++L+      +N   +SD    
Sbjct: 1077 GEKQRTMNDLQ------------DKVDGYLQK---DWWVDLL-----QKNNYKVSD--FS 1114

Query: 520  GKMRALERLLSLWTLQGDKILLFSYSVRMLDILEKFLIR------------KGYCFSRFD 567
            GKM  L  +LS+    GDK L+FS S+  LD++E +L R            KG  + R D
Sbjct: 1115 GKMILLLDILSMSADVGDKALVFSQSIPTLDLIELYLSRVPRHGKQGKFWKKGKDWYRID 1174

Query: 568  GTTPMNARQLLIDEFNRCPSKQV--FLISTRAGNLGVNLVSANRVVIFDPSWNPAQDLQA 625
            G T  + RQ L+D FN   +K+V   LISTRAG+LG+NL +ANRV+I D SWNP  DLQA
Sbjct: 1175 GKTESSERQKLVDRFNEPDNKRVKCTLISTRAGSLGINLYAANRVIIVDGSWNPTYDLQA 1234

Query: 626  QDRSFRFGQRRHVTVFRLLGAGSLEELIYSRQIYKQQLS 664
              R++R+GQ++ V  +RL+  G++EE IY RQ+ K+ L+
Sbjct: 1235 IFRAWRYGQKKPVFAYRLMARGTIEEKIYKRQVTKEGLA 1273
>AT4G31900.1 | chr4:15431528-15438443 FORWARD LENGTH=1203
          Length = 1202

 Score =  214 bits (544), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 156/538 (28%), Positives = 257/538 (47%), Gaps = 108/538 (20%)

Query: 124 VPSSINCRLLVHQRDGVRFLYNLYRNNHGGVLGDDMGLGKTIQTIAFLSAVIGKDNDHGD 183
            P  +   L  +Q +G+ FL   +      +L D+MGLGKTIQ+IAFL+++  ++     
Sbjct: 217 TPEFLTGTLHTYQLEGLNFLRYSWSKKTNVILADEMGLGKTIQSIAFLASLFEEN----- 271

Query: 184 QLVEGRKIAPILILCPTSVIRNWENEFAEWA-RCSVAVYHGPN--RDLVLQ------KVE 234
                  ++P L++ P S IRNWE EFA WA   +V +Y G +  RD++ +      +  
Sbjct: 272 -------LSPHLVVAPLSTIRNWEREFATWAPHMNVVMYTGDSEARDVIWEHEFYFSEGR 324

Query: 235 TQRLEIVITSFDTFRIHGKILCGISWDLVVVDEAHRLKNEKSKLYTACLEITTRKRFGLT 294
             + ++++T+++       +L  I W  +++DE HRLKN+KSKLY++  + T++    LT
Sbjct: 325 KSKFDVLLTTYEMVHPGISVLSPIKWTCMIIDEGHRLKNQKSKLYSSLSQFTSKHIVLLT 384

Query: 295 GTIMQNKIMELFNLFDWIVPGCLGDREHFRVYYDEPLKHGQRFSAPERFVQVADKRKKHL 354
           GT +QN + ELF L  ++     G  E F           Q  +  E+  +        L
Sbjct: 385 GTPLQNNLNELFALMHFLDADKFGSLEKF-----------QDINKEEQISR--------L 425

Query: 355 VSVLSKFLLRRTKEETIGHLMLGKEDNIVFCRMSDVQKRVYRRMLQQPDVQILINKDLPC 414
             +L+  LLRR K++ +   +  K++ I+   MS  QK VY+ ++   + Q+L  K    
Sbjct: 426 HQMLAPHLLRRLKKDVLKDKVPPKKELILRVDMSSQQKEVYKAVITN-NYQVLTKK---- 480

Query: 415 SCGSPLTQVECCKRTEPHGIIWSYLHRDNPEGCSLCPFCLVLPCLGKLQQISNHLELIKP 474
                                     RD            +   L KL+Q+ +H     P
Sbjct: 481 --------------------------RD----------AKISNVLMKLRQVCSH-----P 499

Query: 475 NLKDEIEKQKKDAELAAAVFDTDIELVGGGAKSENFMGLSDAEHCGKMRALERLLSLWTL 534
            L  + E + +DA                   +E F  L +A   GK++ L++++     
Sbjct: 500 YLLPDFEPRFEDA-------------------NEAFTKLLEA--SGKLQLLDKMMVKLKE 538

Query: 535 QGDKILLFSYSVRMLDILEKFLIRKGYCFSRFDGTTPMNARQLLIDEFNRCPSKQV-FLI 593
           QG ++L+++     L +LE +   K + + R DG      RQ+ ID FN   S +  FL+
Sbjct: 539 QGHRVLIYTQFQHTLYLLEDYFTFKNWNYERIDGKISGPERQVRIDRFNAENSNRFCFLL 598

Query: 594 STRAGNLGVNLVSANRVVIFDPSWNPAQDLQAQDRSFRFGQRRHVTVFRLLGAGSLEE 651
           STRAG +G+NL +A+ V+I+D  WNP  DLQA  R  R GQ   V ++RL+  G++EE
Sbjct: 599 STRAGGIGINLATADTVIIYDSDWNPHADLQAMARVHRLGQTNKVMIYRLIHKGTVEE 656
>AT2G02090.1 | chr2:523481-526884 FORWARD LENGTH=764
          Length = 763

 Score =  184 bits (468), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 161/573 (28%), Positives = 258/573 (45%), Gaps = 103/573 (17%)

Query: 135 HQRDGVRFLYNLYRNN-HGGVLGDDMGLGKTIQTIAFLSAVIGKDNDHGDQLVEGRKIAP 193
           +Q  GV FL  LY+    G +L D+MGLGKTIQ I +L+ +   +ND G          P
Sbjct: 216 YQLVGVNFLLLLYKKGIEGAILADEMGLGKTIQAITYLTLLSRLNNDPG----------P 265

Query: 194 ILILCPTSVIRNWENEFAEWARC-SVAVYHGPNRDLVLQKVETQR-------LEIVITSF 245
            L++CP SV+ NWE E  +W    +V  YHG  R    +++ +           +++  +
Sbjct: 266 HLVVCPASVLENWERELRKWCPSFTVLQYHGAARAAYSRELNSLSKAGKPPPFNVLLVCY 325

Query: 246 DTFRIHG-------KILCGISWDLVVVDEAHRLKNEKSKLYTACLEIT--TRKRFGLTGT 296
             F  H        K+L    W  V++DEAH LK++ S  +   + +     +R  LTGT
Sbjct: 326 SLFERHSEQQKDDRKVLKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGT 385

Query: 297 IMQNKIMELFNLFDWIVPGCLGDREHFRVYYDEPLKHGQRFSAPERFVQVADKRKKHLVS 356
            +QN + EL++L ++++P          ++  E +   +  +A +   ++  + K    S
Sbjct: 386 PLQNDLHELWSLLEFMLPD---------IFTTENVDLKKLLNAED--TELITRMK----S 430

Query: 357 VLSKFLLRRTKEETIGHLMLGKEDNIVFCRMSDVQKRVYRRMLQQPDVQILINKDLPCSC 416
           +L  F+LRR K + +  L + K   + +  M   Q+  Y+  +++               
Sbjct: 431 ILGPFILRRLKSDVMQQL-VPKIQRVEYVLMERKQEDAYKEAIEE--------------- 474

Query: 417 GSPLTQVECCKRTEPHGIIWSYLHRDNPEGCSLCPFCLVLP------CLGKLQQISNHLE 470
               +Q    K +                  SL      LP         + ++I+NH  
Sbjct: 475 YRAASQARLVKLSSK----------------SLNSLAKALPKRQISNYFTQFRKIANHPL 518

Query: 471 LIKPNLKDE--IEKQKKDAELAAAVFDTDIELVGGGAKSENFM---------GLSDAEHC 519
           LI+    DE  I   +K   + A  F+  ++ V    K  N           G++D +  
Sbjct: 519 LIRRIYSDEDVIRIARKLHPIGAFGFECSLDRVIEEVKGFNDFRIHQLLFQYGVNDTKGT 578

Query: 520 ---------GKMRALERLLSLWTLQGDKILLFSYSVRMLDILEKFLIRKGYCFSRFDGTT 570
                     K R L  LL      G ++L+FS    MLDILE  L   G  + R DG+T
Sbjct: 579 LSDKHVMLSAKCRTLAELLPSMKKSGHRVLIFSQWTSMLDILEWTLDVIGVTYRRLDGST 638

Query: 571 PMNARQLLIDEFNRCPSKQVFLISTRAGNLGVNLVSANRVVIFDPSWNPAQDLQAQDRSF 630
            +  RQ ++D FN   S    L+STRAG  G+NL  A+ V+I D  +NP  D QA+DR  
Sbjct: 639 QVTDRQTIVDTFNNDKSIFACLLSTRAGGQGLNLTGADTVIIHDMDFNPQIDRQAEDRCH 698

Query: 631 RFGQRRHVTVFRLLGAGSLEELIYSRQIYKQQL 663
           R GQ + VT+FRL+   +++E IY  +I K++L
Sbjct: 699 RIGQTKPVTIFRLVTKSTVDENIY--EIAKRKL 729
>AT2G18760.1 | chr2:8129154-8133502 FORWARD LENGTH=1188
          Length = 1187

 Score =  176 bits (447), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 77/165 (46%), Positives = 113/165 (68%)

Query: 515 DAEHCGKMRALERLLSLWTLQGDKILLFSYSVRMLDILEKFLIRKGYCFSRFDGTTPMNA 574
           + E  GKM+ +  +L +W  QG ++LLFS + +MLDILE FL+   Y + R DG TP+  
Sbjct: 722 NPERSGKMKVVAEVLKVWKQQGHRVLLFSQTQQMLDILESFLVANEYSYRRMDGLTPVKQ 781

Query: 575 RQLLIDEFNRCPSKQVFLISTRAGNLGVNLVSANRVVIFDPSWNPAQDLQAQDRSFRFGQ 634
           R  LIDEFN      VF+++T+ G LG NL  ANRV+IFDP WNP+ D+QA++R++R GQ
Sbjct: 782 RMALIDEFNNSEDMFVFVLTTKVGGLGTNLTGANRVIIFDPDWNPSNDMQARERAWRIGQ 841

Query: 635 RRHVTVFRLLGAGSLEELIYSRQIYKQQLSNIAVSGKIEKRYFEG 679
           ++ VTV+RL+  G++EE +Y RQIYK  L+N  +    ++R+F+ 
Sbjct: 842 KKDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQQRRFFKA 886

 Score =  145 bits (367), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 92/325 (28%), Positives = 158/325 (48%), Gaps = 49/325 (15%)

Query: 122 VQVPSSINCRLLVHQRDGVRFLYNLYRNNHGGVLGDDMGLGKTIQTIAFLSAVIGKDNDH 181
           + +P  I  +L  +QR GV++L+ L+    GG++GD+MGLGKTIQ ++FL ++      H
Sbjct: 375 LNIPECIFRKLFDYQRVGVQWLWELHCQRAGGIIGDEMGLGKTIQVLSFLGSL------H 428

Query: 182 GDQLVEGRKIAPILILCPTSVIRNWENEFAEW---------------------------- 213
             ++ +     P +I+CP +++R W  E  +W                            
Sbjct: 429 FSKMYK-----PSIIICPVTLLRQWRREAQKWYPDFHVEILHDSAQDSGHGKGQGKASES 483

Query: 214 ---ARCSVAVYHGPNR------DLVLQKVETQRLEIVITSFDTFRIHGKILCGISWDLVV 264
              +  SV   H P        D +L +V      ++IT+++  R+ G+ L  I W   V
Sbjct: 484 DYDSESSVDSDHEPKSKNTKKWDSLLNRVLNSESGLLITTYEQLRLQGEKLLNIEWGYAV 543

Query: 265 VDEAHRLKNEKSKLYTACLEITTRKRFGLTGTIMQNKIMELFNLFDWIVPGCLGDREHFR 324
           +DE HR++N  S +   C ++ T  R  +TG  +QNK+ EL++LFD++ PG LG    F 
Sbjct: 544 LDEGHRIRNPNSDITLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFE 603

Query: 325 VYYDEPLKHGQRFSAPERFVQVADKRKKHLVSVLSKFLLRRTKEETIGHLMLGKEDNIVF 384
             +  P+  G   +A    V  A +    L  ++  +LLRR K +   HL   K ++++F
Sbjct: 604 AEFSVPITVGGYANASPLQVSTAYRCAVVLRDLIMPYLLRRMKADVNAHLT-KKTEHVLF 662

Query: 385 CRMSDVQKRVYRRMLQQPDVQILIN 409
           C ++  Q+  YR  L   +V+ + +
Sbjct: 663 CSLTVEQRSTYRAFLASSEVEQIFD 687
>AT5G19310.1 | chr5:6498906-6503432 FORWARD LENGTH=1065
          Length = 1064

 Score =  145 bits (365), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 93/283 (32%), Positives = 148/283 (52%), Gaps = 19/283 (6%)

Query: 121 VVQVPSSINC-RLLVHQRDGVRFLYNLYRNNHGGVLGDDMGLGKTIQTIAFLSAVIGKDN 179
           V + PS +    L  +Q +G++++ +LY N++ G+L D+MGLGKTIQTIA ++ ++   +
Sbjct: 374 VTKQPSLLQGGELRSYQLEGLQWMVSLYNNDYNGILADEMGLGKTIQTIALIAYLLESKD 433

Query: 180 DHGDQLVEGRKIAPILILCPTSVIRNWENEFAEWA-RCSVAVYHGP--NRDLVLQKVETQ 236
            HG          P LIL P +V+ NWENEFA WA   S  +Y G    R  +  ++   
Sbjct: 434 LHG----------PHLILAPKAVLPNWENEFALWAPSISAFLYDGSKEKRTEIRARIAGG 483

Query: 237 RLEIVITSFDTFRIHGKILCGISWDLVVVDEAHRLKNEKSKLY-TACLEITTRKRFGLTG 295
           +  ++IT +D        L  I W+ ++VDE HRLKN +  L  T       ++R  LTG
Sbjct: 484 KFNVLITHYDLIMRDKAFLKKIDWNYMIVDEGHRLKNHECALAKTLGTGYRIKRRLLLTG 543

Query: 296 TIMQNKIMELFNLFDWIVPGCLGDREHFRVYYDEPLKHGQRFSAPERFVQVADKRKKHLV 355
           T +QN + EL++L ++++P       +F  +++ P       S  +    +   R  H  
Sbjct: 544 TPIQNSLQELWSLLNFLLPHIFNSIHNFEEWFNTPFAECGSASLTDEEELLIINRLHH-- 601

Query: 356 SVLSKFLLRRTKEETIGHLMLGKEDNIVFCRMSDVQKRVYRRM 398
            V+  FLLRR K E +   + GK   I+ C MS  QK  Y+++
Sbjct: 602 -VIRPFLLRRKKSE-VEKFLPGKTQVILKCDMSAWQKLYYKQV 642

 Score =  125 bits (314), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 63/139 (45%), Positives = 89/139 (64%), Gaps = 1/139 (0%)

Query: 519 CGKMRALERLLSLWTLQGDKILLFSYSVRMLDILEKFLIRKGYCFSRFDGTTPMNARQLL 578
            GK   L+RLL      G +ILLFS   R++D+LE +L    Y + R DG+T  + R +L
Sbjct: 694 SGKFELLDRLLPKLKKAGHRILLFSQMTRLIDLLEIYLSLNDYMYLRLDGSTKTDQRGIL 753

Query: 579 IDEFNRCPSKQ-VFLISTRAGNLGVNLVSANRVVIFDPSWNPAQDLQAQDRSFRFGQRRH 637
           + +FN   S   +FL+STRAG LG+NL +A+ ++IFD  WNP  D QA+DR+ R GQ++ 
Sbjct: 754 LKQFNEPDSPYFMFLLSTRAGGLGLNLQTADTIIIFDSDWNPQMDQQAEDRAHRIGQKKE 813

Query: 638 VTVFRLLGAGSLEELIYSR 656
           V VF L+  GS+EE+I  R
Sbjct: 814 VRVFVLVSIGSIEEVILER 832
>AT3G12810.1 | chr3:4065636-4073992 FORWARD LENGTH=2056
          Length = 2055

 Score =  138 bits (348), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 67/171 (39%), Positives = 102/171 (59%), Gaps = 1/171 (0%)

Query: 519  CGKMRALERLLSLWTLQGDKILLFSYSVRMLDILEKFLIRKGYCFSRFDGTTPMNARQLL 578
            CGK++ L  LL      G + L+F+   +MLD+LE F+   GY + R DG+TP   RQ L
Sbjct: 1074 CGKLQELAMLLRKLKFGGHRALIFTQMTKMLDVLEAFINLYGYTYMRLDGSTPPEERQTL 1133

Query: 579  IDEFNRCPSKQVFLISTRAGNLGVNLVSANRVVIFDPSWNPAQDLQAQDRSFRFGQRRHV 638
            +  FN  P   +F++STR+G +G+NLV A+ V+ +D  WNPA D QAQDR  R GQ R V
Sbjct: 1134 MQRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1193

Query: 639  TVFRLLGAGSLEELIYSRQIYKQQLSNIAV-SGKIEKRYFEGVQDDKKFQG 688
             ++RL+   ++EE I  +   K+ L N+ + +G+    +F+ +   + F G
Sbjct: 1194 HIYRLISESTIEENILKKANQKRVLDNLVIQNGEYNTEFFKKLDPMELFSG 1244

 Score =  132 bits (333), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 85/295 (28%), Positives = 149/295 (50%), Gaps = 28/295 (9%)

Query: 122 VQVPSSINCRLLVHQRDGVRFLYNLYRNNHGGVLGDDMGLGKTIQTIAFLSAVIGKDNDH 181
            ++P  +   L  +Q  G+ +L  +Y     G+L D+MGLGKTI TIA L+ +       
Sbjct: 526 TKLPFLLKHSLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIMTIALLAHLAC----- 580

Query: 182 GDQLVEGRKIAPILILCPTSVIRNWENEFAEWARC-SVAVYHGPNRDLVLQKVETQRLEI 240
            D+ + G    P LI+ PTSV+ NWE EF +W     +  Y G  ++  L++    +L  
Sbjct: 581 -DKGIWG----PHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKLKRQGWMKLNS 635

Query: 241 VITSFDTFRI---HGKILCGISWDLVVVDEAHRLKNEKSKLYTACLEITTRKRFGLTGTI 297
                 T+R+     K+     W  +++DEAH +KN KS+ +   L   +++R  LTGT 
Sbjct: 636 FHVCITTYRLVIQDSKMFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTP 695

Query: 298 MQNKIMELFNLFDWIVPGCLGDREHFRVYYDEPLKHGQRFSAPERFVQVADKRKKHLV-- 355
           +QN +MEL++L  +++P      + F+ ++  P+            V+  +K  K ++  
Sbjct: 696 LQNDLMELWSLMHFLMPHVFQSHQEFKDWFCNPIAG---------MVEGQEKINKEVIDR 746

Query: 356 --SVLSKFLLRRTKEETIGHLMLGKEDNIVFCRMSDVQKRVYRRMLQQPDVQILI 408
             +VL  FLLRR K + +   +  K ++++FCR+S  Q+ +Y   +   + Q  +
Sbjct: 747 LHNVLRPFLLRRLKRD-VEKQLPSKHEHVIFCRLSKRQRNLYEDFIASTETQATL 800
>AT3G06010.1 | chr3:1802435-1807284 REVERSE LENGTH=1103
          Length = 1102

 Score =  135 bits (340), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 90/285 (31%), Positives = 149/285 (52%), Gaps = 22/285 (7%)

Query: 121 VVQVPSSINC-RLLVHQRDGVRFLYNLYRNNHGGVLGDDMGLGKTIQTIAFLSAVIGKDN 179
           V + PS +    L  +Q +G++++ +L+ NN  G+L D+MGLGKTIQTI+ ++       
Sbjct: 391 VTEQPSLLEGGELRSYQLEGLQWMVSLFNNNLNGILADEMGLGKTIQTISLIAY------ 444

Query: 180 DHGDQLVEGRKI-APILILCPTSVIRNWENEFAEWARCSVA-VYHG--PNRDLVLQKVET 235
                L+E + +  P LI+ P +V+ NW NEFA W     A +Y G    R  + +K+  
Sbjct: 445 -----LLENKGVPGPYLIVAPKAVLPNWVNEFATWVPSIAAFLYDGRLEERKAIREKIAG 499

Query: 236 Q-RLEIVITSFDTFRIHGKILCGISWDLVVVDEAHRLKNEKSKLYTACLE-ITTRKRFGL 293
           + +  ++IT +D        L  I W  ++VDE HRLKN +S L    L     ++R  L
Sbjct: 500 EGKFNVLITHYDLIMRDKAFLKKIEWYYMIVDEGHRLKNHESALAKTLLTGYRIKRRLLL 559

Query: 294 TGTIMQNKIMELFNLFDWIVPGCLGDREHFRVYYDEPLKHGQRFSAPERFVQVADKRKKH 353
           TGT +QN + EL++L ++++P      ++F  +++ P       S  +    +   R  H
Sbjct: 560 TGTPIQNSLQELWSLLNFLLPHIFNSVQNFEEWFNAPFADRGNVSLTDEEELLIIHRLHH 619

Query: 354 LVSVLSKFLLRRTKEETIGHLMLGKEDNIVFCRMSDVQKRVYRRM 398
              V+  F+LRR K+E +   + GK   I+ C MS  QK  Y+++
Sbjct: 620 ---VIRPFILRRKKDE-VEKFLPGKTQVILKCDMSAWQKVYYKQV 660

 Score =  128 bits (321), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 66/139 (47%), Positives = 89/139 (64%), Gaps = 1/139 (0%)

Query: 519 CGKMRALERLLSLWTLQGDKILLFSYSVRMLDILEKFLIRKGYCFSRFDGTTPMNARQLL 578
            GK   L+RLL      G +ILLFS   R++D+LE +L    Y + R DGTT  + R LL
Sbjct: 712 SGKFELLDRLLPKLRKAGHRILLFSQMTRLIDVLEIYLTLNDYKYLRLDGTTKTDQRGLL 771

Query: 579 IDEFNRCPSKQ-VFLISTRAGNLGVNLVSANRVVIFDPSWNPAQDLQAQDRSFRFGQRRH 637
           + +FN   S   +FL+STRAG LG+NL +A+ V+IFD  WNP  D QA+DR+ R GQ++ 
Sbjct: 772 LKQFNEPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKE 831

Query: 638 VTVFRLLGAGSLEELIYSR 656
           V VF L+  GS+EE+I  R
Sbjct: 832 VRVFVLVSVGSVEEVILER 850
>AT5G66750.1 | chr5:26649050-26652869 FORWARD LENGTH=765
          Length = 764

 Score =  132 bits (333), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 94/281 (33%), Positives = 141/281 (50%), Gaps = 29/281 (10%)

Query: 131 RLLVHQRDGVRFLYNLYRNNHGGVLGDDMGLGKTIQTIAFLSAVIGKDNDHGDQLVEGRK 190
           +L  +Q  GV++L +L++N   G+L D MGLGKTIQTI FLS + G   D          
Sbjct: 201 QLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLSHLKGNGLD---------- 250

Query: 191 IAPILILCPTSVIRNWENEFAEWA-RCSVAVYHGP--NRDLV----LQKVETQRLEIVIT 243
             P L++ P S + NW NE A +    +  +YHG    RD +    + K    +  IVIT
Sbjct: 251 -GPYLVIAPLSTLSNWFNEIARFTPSINAIIYHGDKNQRDELRRKHMPKTVGPKFPIVIT 309

Query: 244 SFDTFRIHGK-ILCGISWDLVVVDEAHRLKNEKSKLYTACLEITTRKRFGLTGTIMQNKI 302
           S++      K IL    W  VV+DE HRLKN K KL      +    +  LTGT +QN +
Sbjct: 310 SYEVAMNDAKRILRHYPWKYVVIDEGHRLKNHKCKLLRELKHLKMDNKLLLTGTPLQNNL 369

Query: 303 MELFNLFDWIVPGCLGDREHFRVYYDEPLKHGQRFSAPERFVQVADKRKKHLVS----VL 358
            EL++L ++I+P      + F  ++D   K+    +  E      +KR+  +VS    +L
Sbjct: 370 SELWSLLNFILPDIFTSHDEFESWFDFSEKNKNEATKEEE-----EKRRAQVVSKLHGIL 424

Query: 359 SKFLLRRTKEETIGHLMLGKEDNIVFCRMSDVQKRVYRRML 399
             F+LRR K +    L   KE  I++  M+D QK+    ++
Sbjct: 425 RPFILRRMKCDVELSLPRKKEI-IMYATMTDHQKKFQEHLV 464

 Score =  107 bits (268), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 60/152 (39%), Positives = 90/152 (59%), Gaps = 1/152 (0%)

Query: 518 HCGKMRALERLLSLWTLQGDKILLFSYSVRMLDILEKFLIRKGYCFSRFDGTTPMNARQL 577
            CGK R LERLL        K+L+FS   ++LDI++ +   KG+   R DG+  ++ R+ 
Sbjct: 522 QCGKFRLLERLLVRLFANNHKVLIFSQWTKLLDIMDYYFSEKGFEVCRIDGSVKLDERRR 581

Query: 578 LIDEFNRCPSK-QVFLISTRAGNLGVNLVSANRVVIFDPSWNPAQDLQAQDRSFRFGQRR 636
            I +F+   S   +FL+STRAG LG+NL +A+  +++D  WNP  DLQA DR  R GQ +
Sbjct: 582 QIKDFSDEKSSCSIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTK 641

Query: 637 HVTVFRLLGAGSLEELIYSRQIYKQQLSNIAV 668
            V V+RL  A S+E  +  R   K +L ++ +
Sbjct: 642 PVHVYRLSTAQSIETRVLKRAYSKLKLEHVVI 673
>AT2G13370.1 | chr2:5544601-5555543 REVERSE LENGTH=1725
          Length = 1724

 Score =  127 bits (319), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 69/163 (42%), Positives = 97/163 (59%), Gaps = 6/163 (3%)

Query: 519  CGKMRALERLLSLWTLQGDKILLFSYSVRMLDILEKFLIRKGYCFSRFDGTTPMNARQLL 578
             GK+  L++LL        ++L+FS  VRMLDIL ++L  +G+ F R DG+T    RQ  
Sbjct: 938  SGKLVILDKLLVRLRETKHRVLIFSQMVRMLDILAEYLSLRGFQFQRLDGSTKAELRQQA 997

Query: 579  IDEFNRCPSKQV-FLISTRAGNLGVNLVSANRVVIFDPSWNPAQDLQAQDRSFRFGQRRH 637
            +D FN   S    FL+STRAG LG+NL +A+ VVIFD  WNP  DLQA  R+ R GQ+  
Sbjct: 998  MDHFNAPASDDFCFLLSTRAGGLGINLATADTVVIFDSDWNPQNDLQAMSRAHRIGQQEV 1057

Query: 638  VTVFRLLGAGSLEELIYSRQIYKQQLSNIAV-----SGKIEKR 675
            V ++R + + S+EE I  R   K  L ++ +      G++EKR
Sbjct: 1058 VNIYRFVTSKSVEEEILERAKRKMVLDHLVIQKLNAEGRLEKR 1100

 Score =  114 bits (285), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/285 (29%), Positives = 143/285 (50%), Gaps = 35/285 (12%)

Query: 128 INCRLLVHQRDGVRFLYNLYRNNHGGVLGDDMGLGKTIQTIAFLSAVIGKDNDHGDQLVE 187
           I   L  +Q +G+ FL N + N+   +L D+MGLGKT+Q+++ L  +         Q + 
Sbjct: 621 IGGTLRDYQLEGLNFLVNSWLNDTNVILADEMGLGKTVQSVSMLGFL------QNTQQIP 674

Query: 188 GRKIAPILILCPTSVIRNWENEFAEW-ARCSVAVYHGPNRDL-VLQKVETQ--------- 236
           G    P L++ P S + NW  EF +W    ++ VY G      V Q+ E           
Sbjct: 675 G----PFLVVVPLSTLANWAKEFRKWLPGMNIIVYVGTRASREVCQQYEFYNEKKVGRPI 730

Query: 237 RLEIVITSFDTFRIHGKILCGISWDLVVVDEAHRLKNEKSKLYTACLEITTRKRFGLTGT 296
           +   ++T+++       +L  I W  ++VDEAHRLKN +++LYTA LE +T+ +  +TGT
Sbjct: 731 KFNALLTTYEVVLKDKAVLSKIKWIYLMVDEAHRLKNSEAQLYTALLEFSTKNKLLITGT 790

Query: 297 IMQNKIMELFNLFDWIVPGCLGDREHFRVYYDEPLKHGQRFSAPERFVQVADKRKKHLVS 356
            +QN + EL+ L  ++ PG   +++ F   Y    K+   F+  E           +L  
Sbjct: 791 PLQNSVEELWALLHFLDPGKFKNKDEFVENY----KNLSSFNESEL---------ANLHL 837

Query: 357 VLSKFLLRRTKEETIGHLMLGKEDNIVFCRMSDVQKRVYRRMLQQ 401
            L   +LRR  ++ +   +  K + I+   MS +QK+ Y+ +L++
Sbjct: 838 ELRPHILRRVIKD-VEKSLPPKIERILRVEMSPLQKQYYKWILER 881
>AT2G28290.1 | chr2:12056771-12072950 FORWARD LENGTH=3575
          Length = 3574

 Score =  126 bits (316), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 62/153 (40%), Positives = 92/153 (60%), Gaps = 1/153 (0%)

Query: 519  CGKMRALERLLSLWTLQGDKILLFSYSVRMLDILEKFLIRKGYCFSRFDGTTPMNARQLL 578
            CGK+  L+R+L        ++L FS   R+LD++E +L  KGY + R DG T    R  L
Sbjct: 1072 CGKLEMLDRMLPKLKATDHRVLFFSTMTRLLDVMEDYLTLKGYKYLRLDGQTSGGDRGAL 1131

Query: 579  IDEFNRCPSKQ-VFLISTRAGNLGVNLVSANRVVIFDPSWNPAQDLQAQDRSFRFGQRRH 637
            ID FN+  S   +FL+S RAG +GVNL +A+ V++FD  WNP  DLQAQ R+ R GQ++ 
Sbjct: 1132 IDGFNKSGSPFFIFLLSIRAGGVGVNLQAADTVILFDTDWNPQVDLQAQARAHRIGQKKD 1191

Query: 638  VTVFRLLGAGSLEELIYSRQIYKQQLSNIAVSG 670
            V V R     S+EE + +   +K  ++N +++ 
Sbjct: 1192 VLVLRFETVNSVEEQVRASAEHKLGVANQSITA 1224

 Score =  120 bits (302), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 85/283 (30%), Positives = 148/283 (52%), Gaps = 20/283 (7%)

Query: 125  PSS-INCRLLVHQRDGVRFLYNLYRNNHGGVLGDDMGLGKTIQTIAFLSAVIGKDNDHGD 183
            PSS +  +L  +Q +G+R+L +LY N+  G+L D+MGLGKT+Q I+ +  ++   ND G 
Sbjct: 746  PSSLVGGKLREYQMNGLRWLVSLYNNHLNGILADEMGLGKTVQVISLICYLMETKNDRG- 804

Query: 184  QLVEGRKIAPILILCPTSVIRNWENEFAEWA-RCSVAVYHG-PN--RDLVLQKVETQRLE 239
                     P L++ P+SV+  W++E   WA      VY G P+  R L  +++  Q+  
Sbjct: 805  ---------PFLVVVPSSVLPGWQSEINFWAPSIHKIVYCGTPDERRKLFKEQIVHQKFN 855

Query: 240  IVITSFD-TFRIHGKI-LCGISWDLVVVDEAHRLKNEKSKLYTACLEITTRKRFGLTGTI 297
            +++T+++     H +  L  I W  +++DE HR+KN   KL        +  R  LTGT 
Sbjct: 856  VLLTTYEYLMNKHDRPKLSKIHWHYIIIDEGHRIKNASCKLNADLKHYVSSHRLLLTGTP 915

Query: 298  MQNKIMELFNLFDWIVPGCLGDREHFRVYYDEPLKHGQRFSAPERFVQVADKRK--KHLV 355
            +QN + EL+ L ++++P      E F  ++++P +     SA E  +   +       L 
Sbjct: 916  LQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFQSNGESSAEEALLSEEENLLIINRLH 975

Query: 356  SVLSKFLLRRTKEETIGHLMLGKEDNIVFCRMSDVQKRVYRRM 398
             VL  F+LRR K + + + +  K + ++ C  S  QK + +R+
Sbjct: 976  QVLRPFVLRRLKHK-VENELPEKIERLIRCEASAYQKLLMKRV 1017
>AT3G06400.3 | chr3:1941066-1946700 FORWARD LENGTH=1058
          Length = 1057

 Score =  124 bits (311), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 77/208 (37%), Positives = 120/208 (57%), Gaps = 5/208 (2%)

Query: 518 HCGKMRALERLLSLWTLQGDKILLFSYSVRMLDILEKFLIRKGYCFSRFDGTTPMNARQL 577
           + GKM  L++LL     +  ++L+FS   R+LDILE +L+ +GY + R DG T  + R  
Sbjct: 488 NAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMYRGYLYCRIDGNTGGDERDA 547

Query: 578 LIDEFNRCPSKQ-VFLISTRAGNLGVNLVSANRVVIFDPSWNPAQDLQAQDRSFRFGQRR 636
            I+ +N+  S++ VFL+STRAG LG+NL +A+ V+++D  WNP  DLQAQDR+ R GQ++
Sbjct: 548 SIEAYNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKK 607

Query: 637 HVTVFRLLGAGSLEELIYSRQIYKQQLSNIAV-SGKIEKRYFEGVQDDKKFQGELFGICN 695
            V VFR     ++EE +  R   K  L  + +  G++ ++  + V  D+  Q   +G   
Sbjct: 608 EVQVFRFCTESAIEEKVIERAYKKLALDALVIQQGRLAEQ--KTVNKDELLQMVRYGAEM 665

Query: 696 LFRDLSDKLFTSEIIEMHGEHGKGNTAE 723
           +F    D   T E I+     G+  TAE
Sbjct: 666 VFSS-KDSTITDEDIDRIIAKGEEATAE 692

 Score =  120 bits (301), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 90/294 (30%), Positives = 142/294 (48%), Gaps = 27/294 (9%)

Query: 112 ALSPPGERPVVQVPSSINCRLLVHQRDGVRFLYNLYRNNHGGVLGDDMGLGKTIQTIAFL 171
            L+  G   ++  PS I  ++  +Q  G+ +L  LY N   G+L D+MGLGKT+QTI+ L
Sbjct: 169 GLTGSGNTRLLTQPSCIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLL 228

Query: 172 SAVIGKDNDHGDQLVEGRKIAPILILCPTSVIRNWENEFAEWARCSVAVYHGPN----RD 227
           + +      H  + + G    P +++ P S + NW NE   +     AV    N    R 
Sbjct: 229 AYL------HEYRGING----PHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRH 278

Query: 228 LVLQKVETQRLEIVITSFDTFRIHGKILCGISWDLVVVDEAHRLKNEKSKLYTACLEITT 287
           +    +   + +I +TSF+        L   SW  +++DEAHR+KNE S L       +T
Sbjct: 279 IREDLLVAGKFDICVTSFEMAIKEKTALRRFSWRYIIIDEAHRIKNENSLLSKTMRLFST 338

Query: 288 RKRFGLTGTIMQNKIMELFNLFDWIVPGCLGDREHFRVYYDEPLKHGQRFSAPERFVQVA 347
             R  +TGT +QN + EL+ L ++++P      E F  ++    ++ Q     +  VQ  
Sbjct: 339 NYRLLITGTPLQNNLHELWALLNFLLPEIFSSAETFDEWFQISGENDQ-----QEVVQ-- 391

Query: 348 DKRKKHLVSVLSKFLLRRTKEETIGHLMLGKEDNIVFCRMSDVQKRVYRRMLQQ 401
                 L  VL  FLLRR K +    L   KE  I+   MS +QK+ Y+ +LQ+
Sbjct: 392 -----QLHKVLRPFLLRRLKSDVEKGLPPKKE-TILKVGMSQMQKQYYKALLQK 439
>AT5G18620.2 | chr5:6196190-6202058 REVERSE LENGTH=1073
          Length = 1072

 Score =  122 bits (306), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 76/208 (36%), Positives = 119/208 (57%), Gaps = 5/208 (2%)

Query: 518 HCGKMRALERLLSLWTLQGDKILLFSYSVRMLDILEKFLIRKGYCFSRFDGTTPMNARQL 577
           + GKM  L++LL     +  ++L+FS   R+LDILE +L+ +GY + R DG T  + R  
Sbjct: 493 NAGKMVLLDKLLPKLKDRDSRVLIFSQMTRLLDILEDYLMYRGYQYCRIDGNTGGDERDA 552

Query: 578 LIDEFNRCPSKQ-VFLISTRAGNLGVNLVSANRVVIFDPSWNPAQDLQAQDRSFRFGQRR 636
            I+ +N+  S++ VFL+STRAG LG+NL +A+ V+++D  WNP  DLQAQDR+ R GQ++
Sbjct: 553 SIEAYNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKK 612

Query: 637 HVTVFRLLGAGSLEELIYSRQIYKQQLSNIAV-SGKIEKRYFEGVQDDKKFQGELFGICN 695
            V VFR     ++E  +  R   K  L  + +  G++ ++  + V  D+  Q   +G   
Sbjct: 613 EVQVFRFCTENAIEAKVIERAYKKLALDALVIQQGRLAEQ--KTVNKDELLQMVRYGAEM 670

Query: 696 LFRDLSDKLFTSEIIEMHGEHGKGNTAE 723
           +F    D   T E I+     G+  TAE
Sbjct: 671 VFSS-KDSTITDEDIDRIIAKGEEATAE 697

 Score =  120 bits (301), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 92/295 (31%), Positives = 147/295 (49%), Gaps = 29/295 (9%)

Query: 117 GERPVVQVPSSINCRLLVHQRDGVRFLYNLYRNNHGGVLGDDMGLGKTIQTIAFLSAVIG 176
           G R + Q P+ I  +L  +Q  G+ +L  LY N   G+L D+MGLGKT+QTI+ L+ +  
Sbjct: 180 GTRLLTQ-PACIQGKLRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYL-- 236

Query: 177 KDNDHGDQLVEGRKIAPILILCPTSVIRNWENEFAEWARCSVAVYHGPN----RDLVLQK 232
               H  + + G    P +++ P S + NW NE   +     AV    N    R +  + 
Sbjct: 237 ----HEYRGING----PHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIREEL 288

Query: 233 VETQRLEIVITSFDTFRIHGKILCGISWDLVVVDEAHRLKNEKSKLYTACLEITTRKRFG 292
           +   + +I +TSF+        L   SW  +++DEAHR+KNE S L       +T  R  
Sbjct: 289 LVAGKFDICVTSFEMAIKEKTTLRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLL 348

Query: 293 LTGTIMQNKIMELFNLFDWIVPGCLGDREHFRVYYDEPLKHGQRFSAPERFVQVADKRKK 352
           +TGT +QN + EL+ L ++++P      E F  ++    ++ Q     +  VQ       
Sbjct: 349 ITGTPLQNNLHELWALLNFLLPEVFSSAETFDEWFQISGENDQ-----QEVVQ------- 396

Query: 353 HLVSVLSKFLLRRTKEETIGHLMLGKEDNIVFCRMSDVQKRVYRRMLQQPDVQIL 407
            L  VL  FLLRR K +    L   KE  I+   MS +QK+ Y+ +LQ+ D++++
Sbjct: 397 QLHKVLRPFLLRRLKSDVEKGLPPKKE-TILKVGMSQMQKQYYKALLQK-DLEVV 449
>AT2G25170.1 | chr2:10714411-10723763 FORWARD LENGTH=1385
          Length = 1384

 Score =  122 bits (305), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 86/315 (27%), Positives = 151/315 (47%), Gaps = 58/315 (18%)

Query: 124 VPSSINCRLLVHQRDGVRFLYNLYRNNHGGVLGDDMGLGKTIQTIAFLSAVIGKDNDHGD 183
            P  +   L  +Q +G+ FL   +      +L D+MGLGKTIQ+IA L+++  ++     
Sbjct: 265 TPEFLKGLLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIALLASLFEEN----- 319

Query: 184 QLVEGRKIAPILILCPTSVIRNWENEFAEWA-RCSVAVYHGPNRDLVL------------ 230
                  + P L++ P S +RNWE EFA WA + +V +Y G  +   +            
Sbjct: 320 -------LIPHLVIAPLSTLRNWEREFATWAPQMNVVMYFGTAQARAVIREHEFYLSKDQ 372

Query: 231 --------------QKVETQRLEIVITSFDTFRIHGKILCGISWDLVVVDEAHRLKNEKS 276
                          K +  + ++++TS++   +   +L  I W+ ++VDE HRLKN+ S
Sbjct: 373 KKIKKKKSGQISSESKQKRIKFDVLLTSYEMINLDSAVLKPIKWECMIVDEGHRLKNKDS 432

Query: 277 KLYTACLEITTRKRFGLTGTIMQNKIMELFNLFDWIVPGCLGDREHFRVYYDEPLKHGQR 336
           KL+++  + ++  R  LTGT +QN + ELF L  ++  G  G  E F+            
Sbjct: 433 KLFSSLTQYSSNHRILLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQ------------ 480

Query: 337 FSAPERFVQVADKRK-KHLVSVLSKFLLRRTKEETIGHLMLGKEDNIVFCRMSDVQKRVY 395
               E F  +  + +   L  +L+  LLRR K++ +   M  K++ I+   +S +QK  Y
Sbjct: 481 ----EEFKDINQEEQISRLHKMLAPHLLRRVKKDVMKD-MPPKKELILRVDLSSLQKEYY 535

Query: 396 RRMLQQPDVQILINK 410
           + +  + + Q+L  K
Sbjct: 536 KAIFTR-NYQVLTKK 549

 Score =  120 bits (301), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 72/203 (35%), Positives = 113/203 (55%), Gaps = 14/203 (6%)

Query: 517 EHCGKMRALERLLSLWTLQGDKILLFSYSVRMLDILEKFLIRKGYCFSRFDGTTPMNARQ 576
           E CGK++ L++++     QG ++L+++    MLD+LE +   K + + R DG      RQ
Sbjct: 592 ESCGKLQLLDKMMVKLKEQGHRVLIYTQFQHMLDLLEDYCTHKKWQYERIDGKVGGAERQ 651

Query: 577 LLIDEFN-RCPSKQVFLISTRAGNLGVNLVSANRVVIFDPSWNPAQDLQAQDRSFRFGQR 635
           + ID FN +  +K  FL+STRAG LG+NL +A+ V+I+D  WNP  DLQA  R+ R GQ 
Sbjct: 652 IRIDRFNAKNSNKFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQT 711

Query: 636 RHVTVFRLLGAGSLEELIYSRQIYKQQLSNIAVSGKIEKRYFEGVQDDKKFQGELFGICN 695
             V ++RL+  G++EE +      K  L ++ V GK++ +     + D           +
Sbjct: 712 NKVMIYRLINRGTIEERMMQLTKKKMVLEHLVV-GKLKTQNINQEELD-----------D 759

Query: 696 LFRDLSDKLFTSEIIEMHGEHGK 718
           + R  S +LF SE  E  G+ GK
Sbjct: 760 IIRYGSKELFASEDDEA-GKSGK 781
>AT2G46020.2 | chr2:18923304-18931769 FORWARD LENGTH=2194
          Length = 2193

 Score =  117 bits (293), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 146/283 (51%), Gaps = 19/283 (6%)

Query: 121  VVQVPSSINCRLLV-HQRDGVRFLYNLYRNNHGGVLGDDMGLGKTIQTIAFLSAVIGKDN 179
            VV+ PS +    L  +Q  G++++ +LY N   G+L D+MGLGKT+Q +A ++ ++    
Sbjct: 969  VVRQPSMLQAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKG 1028

Query: 180  DHGDQLVEGRKIAPILILCPTSVIRNWENEFAEWARCSVAVYHGPNRD----LVLQKVET 235
            ++G          P LI+ P +V+ NW++E   W      +Y+   +D    L  Q+V  
Sbjct: 1029 NYG----------PHLIIVPNAVLVNWKSELHTWLPSVSCIYYVGTKDQRSKLFSQEVCA 1078

Query: 236  QRLEIVITSFDTFRIHGKILCGISWDLVVVDEAHRLKNEKSKLYTACLEITTRKRFGLTG 295
             +  +++T+++        L  + W  +++DEA R+K+ +S L         ++R  LTG
Sbjct: 1079 MKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTG 1138

Query: 296  TIMQNKIMELFNLFDWIVPGCLGDREHFRVYYDEPL-KHGQRFSAPERFVQVADK--RKK 352
            T +QN + EL++L + ++P    +R+ F  ++ +P  K G   +  + +++   K     
Sbjct: 1139 TPLQNDLKELWSLLNLLLPDVFDNRKAFHDWFAQPFQKEGPAHNIEDDWLETEKKVIVIH 1198

Query: 353  HLVSVLSKFLLRRTKEETIGHLMLGKEDNIVFCRMSDVQKRVY 395
             L  +L  F+LRR  E+  G L   K   ++ CRMS +Q  VY
Sbjct: 1199 RLHQILEPFMLRRRVEDVEGSLP-AKVSVVLRCRMSAIQSAVY 1240

 Score = 93.6 bits (231), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 52/127 (40%), Positives = 75/127 (59%), Gaps = 3/127 (2%)

Query: 519  CGKMRALERLLSLWTLQGDKILLFSYSVRMLDILEKFLIRKGYCFSRFDGTTPMNARQLL 578
            CGK+  L+R+L      G ++LLFS   ++LDILE++L  +   + R DGTT +  R+  
Sbjct: 1307 CGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESA 1366

Query: 579  IDEFNRCPSKQ--VFLISTRAGNLGVNLVSANRVVIFDPSWNPAQDLQAQDRSFRFGQRR 636
            I +FN  P     +FL+S RA   G+NL +A+ VVI+DP  NP  + QA  R+ R GQ R
Sbjct: 1367 IVDFN-DPDTDCFIFLLSIRAAGRGLNLQTADTVVIYDPDPNPKNEEQAVARAHRIGQTR 1425

Query: 637  HVTVFRL 643
             V V  +
Sbjct: 1426 EVKVIYM 1432
>AT5G44800.1 | chr5:18083659-18092162 REVERSE LENGTH=2224
          Length = 2223

 Score =  115 bits (287), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 83/295 (28%), Positives = 141/295 (47%), Gaps = 45/295 (15%)

Query: 132 LLVHQRDGVRFLYNLYRNNHGGVLGDDMGLGKTIQTIAFLSAVIGKDNDHGDQLVEGRKI 191
           L  HQ + + +L   +  +   +L D+MGLGKT+   AFLS++            E    
Sbjct: 689 LFAHQLEALNWLRRCWHKSKNVILADEMGLGKTVSASAFLSSLY----------FEFGVA 738

Query: 192 APILILCPTSVIRNWENEFAEWARC-SVAVYHGP---------------NRDLVLQKVET 235
            P L+L P S + NW +EF+ WA   +V  YHG                N     +K  +
Sbjct: 739 RPCLVLVPLSTMPNWLSEFSLWAPLLNVVEYHGSAKGRAIIRDYEWHAKNSTGTTKKPTS 798

Query: 236 QRLEIVITSFDTFRIHGKILCGISWDLVVVDEAHRLKNEKSKLYTACLEITTRKRFGLTG 295
            +  +++T+++        L G+ W+++VVDE HRLKN +SKL++     + + R  LTG
Sbjct: 799 YKFNVLLTTYEMVLADSSHLRGVPWEVLVVDEGHRLKNSESKLFSLLNTFSFQHRVLLTG 858

Query: 296 TIMQNKIMELFNLFDWIVPGCLGDREHFRVYYDEPLKHGQRFSAPERFVQVADKRK-KHL 354
           T +QN I E++NL +++                +P       S  ERF  +    K + L
Sbjct: 859 TPLQNNIGEMYNLLNFL----------------QPSSFPSLSSFEERFHDLTSAEKVEEL 902

Query: 355 VSVLSKFLLRRTKEETIGHLMLGKEDNIVFCRMSDVQKRVYRRMLQQPDVQILIN 409
             +++  +LRR K++ + ++   K + +V   ++ +Q   YR ML + + QIL N
Sbjct: 903 KKLVAPHMLRRLKKDAMQNIP-PKTERMVPVELTSIQAEYYRAMLTK-NYQILRN 955

 Score =  105 bits (263), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 60/164 (36%), Positives = 95/164 (57%), Gaps = 2/164 (1%)

Query: 519  CGKMRALERLLSLWTLQGDKILLFSYSVRMLDILEKFL-IRKG-YCFSRFDGTTPMNARQ 576
              K+  L  +L +   +G ++L+FS   ++LDILE +L I  G   F R DG+  +  RQ
Sbjct: 1003 SAKLTLLHSMLKVLHKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTFERVDGSVAVADRQ 1062

Query: 577  LLIDEFNRCPSKQVFLISTRAGNLGVNLVSANRVVIFDPSWNPAQDLQAQDRSFRFGQRR 636
              I  FN+  ++ VFL+STRA  LG+NL +A+ V+I+D  +NP  D+QA +R+ R GQ +
Sbjct: 1063 AAIARFNQDKNRFVFLLSTRACGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSK 1122

Query: 637  HVTVFRLLGAGSLEELIYSRQIYKQQLSNIAVSGKIEKRYFEGV 680
             + V+RL+   S+EE I      K  L  + V+    ++ FE +
Sbjct: 1123 RLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEFEDI 1166
>AT1G02670.1 | chr1:576046-580299 FORWARD LENGTH=679
          Length = 678

 Score =  114 bits (285), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 132/551 (23%), Positives = 218/551 (39%), Gaps = 92/551 (16%)

Query: 152 GGVLGDDMGLGKTIQTIAFLSAVIGKDNDHGDQLVEGRKIAPILILCPTSVIRNWENEFA 211
           GG+L D+MG+GKTIQ I+ + A         D+      +   L+L P   +  W +E +
Sbjct: 155 GGILADEMGMGKTIQAISLVLA-----RREVDRAKSREAVGHTLVLVPPVALSQWLDEIS 209

Query: 212 EW---ARCSVAVYHGPNRDLVLQKVETQRLEIVITSF----DTFRIHGKI------LCGI 258
                    V  YHGP RD  +QK+     + V+T+     + +R    +      L  I
Sbjct: 210 RLTSPGSTRVLQYHGPKRDKNVQKL--MNYDFVLTTSPIVENEYRKDEGVDETMSPLHSI 267

Query: 259 SWDLVVVDEAHRLKNEKSKLYTACLEITTRKRFGLTGTIMQNKIMELFNLFDWIVPGCLG 318
            W+ ++VDEAH +KN  S+        T +  F L  T            + W + G   
Sbjct: 268 KWNRIIVDEAHDIKNRSSR--------TAKAVFALEAT------------YRWALSGT-- 305

Query: 319 DREHFRVYYDEPLKHGQRFSAPERFVQVADKRKKHLVSVLSKFLLRRTKEETIGHLMLGK 378
                      PL++       E +  V+        S  + F  R T      H+   +
Sbjct: 306 -----------PLQN----DVDELYSLVSYSFLNFFYSTYASFAFRHT------HITFAR 344

Query: 379 EDNIVFCRMSDVQK-RVYRRMLQQPDVQIL-INKDLPCSCGSPLTQVECCKRTEPHGIIW 436
              + F    ++    +  R+   P V I+ IN  L       L+ VE       + +  
Sbjct: 345 NVTVKFLIGGNILPLSIPVRIENVPAVLIMQINTSLGGKRRDALSVVEADFYESLYKVSK 404

Query: 437 SYLHRDNPEGCSLCPFCLVLPCLGKLQQISNHLELIK--------PNLKDEIEKQKK--- 485
           +        G  +  +  +   L +L+Q  +H  L+          NL D  + +K+   
Sbjct: 405 TTFDGYIQAGTLMNNYAHIFGLLIRLRQAVDHPYLVSYSSPSGANANLLDANKNEKECGF 464

Query: 486 DAELAAAVFDTDIELVGGGAKSENF--------MGLSDAEHCGKMRALERLLSL-----W 532
             + +   F T  E      K + F        + L D +   K+ AL   +       W
Sbjct: 465 GHDPSKDYFVTSSEHQASKTKLKGFRASSILNRINLDDFKTSTKIEALREEIRFMVERDW 524

Query: 533 TLQGDKILLFSYSVRMLDILEKFLIRKGYCFSRFDGTTPMNARQLLIDEFNRCPSKQVFL 592
           +    K ++FS     LD++   L + G    +  G+    A+   +  F   P  +V L
Sbjct: 525 SA---KAIVFSQFTSFLDLISYALGKSGVSCVQLVGSMSKAAKDAALKNFKEEPDCRVLL 581

Query: 593 ISTRAGNLGVNLVSANRVVIFDPSWNPAQDLQAQDRSFRFGQRRHVTVFRLLGAGSLEEL 652
           +S +AG + +NL +A+ V + DP WNPA + QAQDR  R GQ + V V R +   ++EE 
Sbjct: 582 MSLQAGGVALNLTAASHVFMMDPWWNPAVERQAQDRIHRIGQCKPVRVVRFIMEKTVEEK 641

Query: 653 IYSRQIYKQQL 663
           I + Q  K+ L
Sbjct: 642 ILTLQKKKEDL 652
>AT3G57300.2 | chr3:21199612-21207635 FORWARD LENGTH=1541
          Length = 1540

 Score =  114 bits (284), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 56/152 (36%), Positives = 92/152 (60%)

Query: 519  CGKMRALERLLSLWTLQGDKILLFSYSVRMLDILEKFLIRKGYCFSRFDGTTPMNARQLL 578
             GK++ L+ LL        ++LLF+   +ML+ILE ++  + Y + R DG++ +  R+ +
Sbjct: 1238 SGKLQTLDILLKRLRAGNHRVLLFAQMTKMLNILEDYMNYRKYKYLRLDGSSTIMDRRDM 1297

Query: 579  IDEFNRCPSKQVFLISTRAGNLGVNLVSANRVVIFDPSWNPAQDLQAQDRSFRFGQRRHV 638
            + +F       VFL+STRAG LG+NL +A+ V+ ++  WNP  DLQA DR+ R GQ + V
Sbjct: 1298 VRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDV 1357

Query: 639  TVFRLLGAGSLEELIYSRQIYKQQLSNIAVSG 670
            TV+RL+   ++EE I  R   K  +  + ++G
Sbjct: 1358 TVYRLICKETVEEKILHRASQKNTVQQLVMTG 1389

 Score =  107 bits (268), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 86/334 (25%), Positives = 143/334 (42%), Gaps = 66/334 (19%)

Query: 111 LALSPPGERPV---VQVPSSINCRLLVHQRDGVRFLYNLYRNNHGGVLGDDMGLGKTIQT 167
           + L  P   PV   VQ P      L  +Q  G+++L N Y     G+L D+MGLGKTIQ 
Sbjct: 562 IDLHNPSTMPVTSTVQTPELFKGTLKEYQMKGLQWLVNCYEQGLNGILADEMGLGKTIQA 621

Query: 168 IAFLSAVIGKDNDHGDQLVEGRKIAPILILCPTSVIRNWENEFAEWARC----SVAVYHG 223
           +AFL+ +  + N  G          P L++ P SV+ NW +E + +  C    ++  + G
Sbjct: 622 MAFLAHLAEEKNIWG----------PFLVVAPASVLNNWADEISRF--CPDLKTLPYWGG 669

Query: 224 PNRDLVLQK----------------------------------VETQRLE-------IVI 242
                +L+K                                  V  Q L        I+I
Sbjct: 670 LQERTILRKNINPKRVMFFSTWIISFDPWAVRQICICKRACNVVRFQTLSDMDAGFHILI 729

Query: 243 TSFDTFRIHGKILCGISWDLVVVDEAHRLKNEKSKLYTACLEITTRKRFGLTGTIMQNKI 302
           TS+       K    + W  +V+DEA  +K+  S  +   L    R R  LTGT +QN +
Sbjct: 730 TSYQLLVTDEKYFRRVKWQYMVLDEAQAIKSSSSIRWKTLLSFNCRNRLLLTGTPIQNNM 789

Query: 303 MELFNLFDWIVPGCLGDREHFRVYYDEPLKHGQRFSAPERFVQVADKRKKHLVSVLSKFL 362
            EL+ L  +I+P    + + F  ++ + +++       E    + + +   L ++L  F+
Sbjct: 790 AELWALLHFIMPMLFDNHDQFNEWFSKGIENHA-----EHGGTLNEHQLNRLHAILKPFM 844

Query: 363 LRRTKEETIGHLMLGKEDNIVFCRMSDVQKRVYR 396
           LRR K++ +  L   K +  V C++S  Q+  Y+
Sbjct: 845 LRRVKKDVVSELTT-KTEVTVHCKLSSRQQAFYQ 877
>AT2G44980.2 | chr2:18552343-18556669 REVERSE LENGTH=878
          Length = 877

 Score =  101 bits (251), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 61/174 (35%), Positives = 91/174 (52%), Gaps = 11/174 (6%)

Query: 517 EHCGKMRALERLLSLWTLQGDKILLFSYSVRMLDILEKFLIRKGYCFSRFDGTTPMNARQ 576
           +  GK+  L++LL      G ++LLFS     LDIL+ F+  + Y + R DG+     R 
Sbjct: 374 QASGKLLVLDQLLKRLHDSGHRVLLFSQMTSTLDILQDFMELRRYSYERLDGSVRAEERF 433

Query: 577 LLIDEFNRCPSKQ-----------VFLISTRAGNLGVNLVSANRVVIFDPSWNPAQDLQA 625
             I  F+    +            VF+ISTRAG +G+NLV+A+ V+ ++  WNP  D QA
Sbjct: 434 AAIKNFSAKTERGLDSEVDGSNAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQA 493

Query: 626 QDRSFRFGQRRHVTVFRLLGAGSLEELIYSRQIYKQQLSNIAVSGKIEKRYFEG 679
             R+ R GQ  HV    L+   S+EE+I  R   K QLS+  V   +E++  +G
Sbjct: 494 LQRAHRIGQISHVLSINLVTEHSVEEVILRRAERKLQLSHNVVGDNMEEKEEDG 547

 Score = 99.8 bits (247), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 87/294 (29%), Positives = 134/294 (45%), Gaps = 37/294 (12%)

Query: 128 INCRLLVHQRDGVRFLYNLYRNNHGGVLG-DDMGLGKTIQTIAFLSAVIGKDNDHGDQLV 186
           +   L  HQ +GV +L   Y      VL  D MGLGKT+Q I+FLS +  +    G    
Sbjct: 47  VTATLKPHQVEGVSWLIQKYLLGVNVVLELDQMGLGKTLQAISFLSYLKFRQGLPG---- 102

Query: 187 EGRKIAPILILCPTSVIRNWENEFAEWA-RCSVAVYHGPN------RDLVLQKVETQR-- 237
                 P L+LCP SV   W +E   +     V  Y G        R  +   V+     
Sbjct: 103 ------PFLVLCPLSVTDGWVSEINRFTPNLEVLRYVGDKYCRLDMRKSMYDHVKKSSKG 156

Query: 238 ----LEIVITSFDTFRIHGKILCGISWDLVVVDEAHRLKNEKSKLYTACLE-ITTRKRFG 292
                ++++T++D   +    L  I W   ++DEA RLKN  S LY   LE     +R  
Sbjct: 157 HFLPFDVLLTTYDIALVDQDFLSQIPWQYAIIDEAQRLKNPNSVLYNVLLEQFLIPRRLL 216

Query: 293 LTGTIMQNKIMELFNLFDWIVPGCLGDREHFRVYYDEPLKHGQRFSAPERFVQVADKRK- 351
           +TGT +QN + EL+ L  + +P   G  + F   + E    G   S     + V++ ++ 
Sbjct: 217 ITGTPIQNNLTELWALMHFCMPLVFGTLDQFLSAFKET---GDGLSG----LDVSNDKET 269

Query: 352 -KHLVSVLSKFLLRRTKEETI--GHLMLGKEDNI-VFCRMSDVQKRVYRRMLQQ 401
            K L  +L  F+LRRTK   I  G+L+L     + V   +  +QK++Y  +L++
Sbjct: 270 YKSLKFILGAFMLRRTKSLLIESGNLVLPPLTELTVMVPLVSLQKKIYTSILRK 323
>AT5G43530.1 | chr5:17489327-17494830 FORWARD LENGTH=1278
          Length = 1277

 Score = 99.8 bits (247), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 51/128 (39%), Positives = 76/128 (59%)

Query: 536  GDKILLFSYSVRMLDILEKFLIRKGYCFSRFDGTTPMNARQLLIDEFNRCPSKQVFLIST 595
            G+K ++FS     LD+LE  L R+G+ F RFDG      R+ ++ EFN    K + L+S 
Sbjct: 1127 GEKSIVFSQWTSFLDLLEIPLRRRGFEFLRFDGKLAQKGREKVLKEFNETKQKTILLMSL 1186

Query: 596  RAGNLGVNLVSANRVVIFDPSWNPAQDLQAQDRSFRFGQRRHVTVFRLLGAGSLEELIYS 655
            +AG +G+NL +A+ V + DP WNPA + QA  R  R GQ+R V V R +   ++EE +  
Sbjct: 1187 KAGGVGLNLTAASSVFLMDPWWNPAVEEQAIMRIHRIGQKRTVFVRRFIVKDTVEERMQQ 1246

Query: 656  RQIYKQQL 663
             Q  KQ++
Sbjct: 1247 VQARKQRM 1254

 Score = 94.4 bits (233), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 76/291 (26%), Positives = 137/291 (47%), Gaps = 53/291 (18%)

Query: 151 HGGVLGDDMGLGKTIQTIAFLSAVIGKDNDHGDQ-------------------LVEGRKI 191
            GG+L D MGLGKT+ TIA + A  G+ N   +                    L   +  
Sbjct: 681 RGGILADAMGLGKTVMTIALILARPGRGNPENEDVLVADVNADKRNRKEIHMALTTVKAK 740

Query: 192 APILILCPTSVIRNWENEFAEWAR---CSVAVYHGPNRDLVLQKVETQRLEIVITSFDTF 248
              LI+CP +++  W++E    ++    SV VY+G +R    + + +   ++V+T++   
Sbjct: 741 GGTLIICPMALLSQWKDELETHSKPDTVSVLVYYGGDRTHDAKAIASH--DVVLTTYGVL 798

Query: 249 R------IHGKILCGISWDLVVVDEAHRLKNEKSKLYTACLEITTRKRFGLTGTIMQNKI 302
                  +   I   I W  +V+DEAH +K+ K++   A  E+++  R+ LTGT +QNK+
Sbjct: 799 TSAYKQDMANSIFHRIDWYRIVLDEAHTIKSWKTQAAKATFELSSHCRWCLTGTPLQNKL 858

Query: 303 MELFNL--FDWIVPGCLGDREHFRVYYDEPLKHGQRFSAPERFVQVADKRKKHLV-SVLS 359
            +L++L  F  + P C  +   +     +P ++G             D R   L+ ++L 
Sbjct: 859 EDLYSLLCFLHVEPWC--NWAWWSKLIQKPYENG-------------DPRGLKLIKAILR 903

Query: 360 KFLLRRTKE--ETIGHLML---GKEDNIVFCRMSDVQKRVYRRMLQQPDVQ 405
             +LRRTKE  +  G L+L     +  ++ C  S+ ++  Y  + ++  VQ
Sbjct: 904 PLMLRRTKETRDKEGSLILELPPTDVQVIECEQSEAERDFYTALFKRSKVQ 954
>AT3G42670.1 | chr3:14755906-14760085 REVERSE LENGTH=1257
          Length = 1256

 Score = 99.4 bits (246), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 152/620 (24%), Positives = 250/620 (40%), Gaps = 129/620 (20%)

Query: 131  RLLVHQRDGVRFLYNLYRNNHGGVLGDDM----------------GLGKTIQTIAFLSAV 174
            +L +HQ+    FL+   +N  G V+   M                G GKT   IAFL++ 
Sbjct: 673  KLHLHQKKAFEFLW---KNLAGSVVPAMMDPSSDKIGGCVVSHTPGAGKTFLIIAFLASY 729

Query: 175  IGKDNDHGDQLVEGRKIAPILILCPTSVIRNWENEFAEWA-RCSVAVYHG---------- 223
            +        ++  G++    L+L P + +  W  EF +W     V + HG          
Sbjct: 730  L--------KIFPGKRP---LVLAPKTTLYTWYKEFIKWEIPVPVHLLHGRRTYCMSKEK 778

Query: 224  ---------PNRDLV--------LQKVETQRLEIVI--TSF------DTFRIHGKILCGI 258
                     P++D++        +QK   Q   +V+  TSF      D+   H K +  +
Sbjct: 779  TIQFEGIPKPSQDVMHVLDCLDKIQKWHAQPSVLVMGYTSFLTLMREDSKFAHRKYMAKV 838

Query: 259  ---SWDLVVVDEAHRLKNEKSKLYTACLEITTRKRFGLTGTIMQNKIMELFNLFDWIVPG 315
               S  L+V+DE H  ++ KS+L  A +++ T  R  L+GT+ QN   E FN        
Sbjct: 839  LRESPGLLVLDEGHNPRSTKSRLRKALMKVDTDLRILLSGTLFQNNFCEYFNTL------ 892

Query: 316  CLGDREHFRVYYDEPLKHGQRFSAPERFVQVADKR-KKHLVSVLSKFLLRRTKEETIGHL 374
            CL   +       E  K  Q   A ++   + + R +K  + +++K +  +  +E +  L
Sbjct: 893  CLARPKFVHEVLVELDKKFQTNQAEQKAPHLLENRARKFFLDIIAKKIDTKVGDERLQGL 952

Query: 375  MLGKEDNIVFCRMSDVQKRVYRRMLQQPDVQI---LINKDLPCSCGSPLTQVECCKRTEP 431
             + +     F    +        +L  P +QI   L+N           T V+    T+ 
Sbjct: 953  NMLRNMTSGFIDNYEGSGSGSGDVL--PGLQIYTLLMNS----------TDVQHKSLTKL 1000

Query: 432  HGIIWSYLHRDNPEGCSLCPFCLVLPCLGKLQQISNHLELIKPNLKDEIEKQKKDAELAA 491
              I+ +Y H    E   L     + P L K        +   P    EIEK K DA+  +
Sbjct: 1001 QNIMSTY-HGYPLELELLITLAAIHPWLVKTTTCCA--KFFNPQELLEIEKLKHDAKKGS 1057

Query: 492  AVFDTDIELVGGGAKSENFMGLSDAEHCGKMRALERLLSLWTLQGDKILLFSYSVRMLDI 551
             V    + LV    K E  +       C  +  +   L L+                   
Sbjct: 1058 KVMFV-LNLVFRVVKREKILIF-----CHNIAPIRLFLELFE------------------ 1093

Query: 552  LEKFLIRKGYCFSRFDGTTPMNARQLLIDEFNRCPSKQ--VFLISTRAGNLGVNLVSANR 609
               F  ++G       G   +  R  +ID+F   P  Q  V L S  A   G++L +A+R
Sbjct: 1094 -NVFRWKRGRELLTLTGDLELFERGRVIDKFEE-PGGQSRVLLASITACAEGISLTAASR 1151

Query: 610  VVIFDPSWNPAQDLQAQDRSFRFGQRRHVTVFRLLGAGSLEELIYSRQIYKQQLSNIAVS 669
            V++ D  WNP++  QA  R+FR GQ++ V V++LL  G+LEE  Y R  +K+ +S++  S
Sbjct: 1152 VIMLDSEWNPSKTKQAIARAFRPGQQKVVYVYQLLSRGTLEEDKYRRTTWKEWVSSMIFS 1211

Query: 670  GKIEKRYFEGVQDDKKFQGE 689
                    E V+D  ++Q E
Sbjct: 1212 E-------EFVEDPSQWQAE 1224
>AT3G20010.1 | chr3:6971352-6976340 FORWARD LENGTH=1048
          Length = 1047

 Score = 97.4 bits (241), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 55/138 (39%), Positives = 81/138 (58%), Gaps = 1/138 (0%)

Query: 527  RLLSLWTLQGD-KILLFSYSVRMLDILEKFLIRKGYCFSRFDGTTPMNARQLLIDEFNRC 585
            RL S    QG  K ++FS    MLD++E  ++  G  F R DGT  + AR   + EF++ 
Sbjct: 882  RLHSSSPSQGAVKTIIFSQWTGMLDLVELRILESGIEFRRLDGTMSLAARDRAVKEFSKK 941

Query: 586  PSKQVFLISTRAGNLGVNLVSANRVVIFDPSWNPAQDLQAQDRSFRFGQRRHVTVFRLLG 645
            P  +V L+S +AGNLG+N+V+A  V++ D  WNP  + QA DR+ R GQ R VTV R+  
Sbjct: 942  PDVKVMLMSLKAGNLGLNMVAACHVILLDLWWNPTTEDQAIDRAHRIGQTRPVTVTRITI 1001

Query: 646  AGSLEELIYSRQIYKQQL 663
              ++E+ I   Q  K+ +
Sbjct: 1002 KDTVEDRILKLQEEKRTM 1019
>AT3G16600.1 | chr3:5652839-5655670 REVERSE LENGTH=639
          Length = 638

 Score = 96.7 bits (239), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 137/294 (46%), Gaps = 69/294 (23%)

Query: 115 PPGERPVVQVPSSINCRLLVHQRDGVRFLYNL-YRNNH--GGVLGDDMGLGKTIQTIAFL 171
           PPG   V+ VP      L+ HQ+  + ++     R+ H  GG+L DD GLGKTI TI+ +
Sbjct: 45  PPG---VLTVP------LMRHQKIALNWMRKKEKRSRHCLGGILADDQGLGKTISTISLI 95

Query: 172 SAVIGKDNDHGDQLV-EGRKIAPILILCPTSVIRNWENEFAEWA----RCSVAVYHGPNR 226
             ++ K      Q   +G+     LI+CP SV++ W  E  E      + SV V+HG +R
Sbjct: 96  --LLQKLKSQSKQRKRKGQNSGGTLIVCPASVVKQWAREVKEKVSDEHKLSVLVHHGSHR 153

Query: 227 ----------DLVLQKVETQRLEI----VITSFDTFR------------IHGKILCGISW 260
                     D+V+        E+    ++  +D+ R             H   L  + W
Sbjct: 154 TKDPTEIAIYDVVMTTYAIVTNEVPQNPMLNRYDSMRGRESLDGSSLIQPHVGALGRVRW 213

Query: 261 DLVVVDEAHRLKNEKSKLYTACLEITTRKRFGLTGTIMQNKIMELFNLFDWIV--PGCLG 318
             VV+DEAH +KN ++ +  AC  +  ++R+ LTGT ++NK+ +L++ F ++   P  + 
Sbjct: 214 LRVVLDEAHTIKNHRTLIAKACFSLRAKRRWCLTGTPIKNKVDDLYSYFRFLRYHPYAMC 273

Query: 319 DREHFRVYYDEPLKHGQRFSAPERFVQVADKRKKH----LVSVLSKFLLRRTKE 368
           +  H            QR  AP       DK+  H    L ++L   +LRRTKE
Sbjct: 274 NSFH------------QRIKAP------IDKKPLHGYKKLQAILRGIMLRRTKE 309

 Score = 66.6 bits (161), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 36/87 (41%), Positives = 52/87 (59%), Gaps = 3/87 (3%)

Query: 590 VFLISTRAGNLGVNLVSANRVVIFDPSWNPAQDLQAQDRSFRFGQRRHVTVFRLLGAGSL 649
             L+S +AGNLG+N+V+A+ V++ D  WNP  + QA DR+ R GQ R VTV R+    ++
Sbjct: 509 AMLMSLKAGNLGLNMVAASHVILLDLWWNPTTEDQAIDRAHRIGQTRAVTVTRIAIKNTV 568

Query: 650 EELIYSRQIYKQQLSNIAVSGKIEKRY 676
           EE I +    K+   NI  S   EK +
Sbjct: 569 EERILTLHERKR---NIVASALGEKNW 592
>AT5G22750.1 | chr5:7565374-7570871 REVERSE LENGTH=1030
          Length = 1029

 Score = 96.3 bits (238), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 68/233 (29%), Positives = 109/233 (46%), Gaps = 27/233 (11%)

Query: 450  CPFCL-------VLPCLGKL------QQISNHLELIKPNLKDEIEKQKKDAELAAAVFDT 496
            CP CL       + PC  +L          N    + P  ++ + KQ+       + F  
Sbjct: 794  CPICLEALEDAVLTPCAHRLCRECLLASWRNSTSGLCPVCRNTVSKQELITAPTESRFQV 853

Query: 497  DIELVGGGAKSENFMGLSDAEHCGKMRALERLLSLWTLQGDKILLFSYSVRMLDILEKFL 556
            D+E        +N++         K+ AL   L      G K +LFS     LD+L+  L
Sbjct: 854  DVE--------KNWV------ESSKITALLEELEGLRSSGSKSILFSQWTAFLDLLQIPL 899

Query: 557  IRKGYCFSRFDGTTPMNARQLLIDEFNRCPSKQVFLISTRAGNLGVNLVSANRVVIFDPS 616
             R  + F R DGT     R+ ++ EF+   S  V L+S +AG +G+NL +A+   + DP 
Sbjct: 900  SRNNFSFVRLDGTLSQQQREKVLKEFSEDGSILVLLMSLKAGGVGINLTAASNAFVMDPW 959

Query: 617  WNPAQDLQAQDRSFRFGQRRHVTVFRLLGAGSLEELIYSRQIYKQQLSNIAVS 669
            WNPA + QA  R  R GQ + V + R +  G++EE + + Q  KQ++ + A++
Sbjct: 960  WNPAVEEQAVMRIHRIGQTKEVKIRRFIVKGTVEERMEAVQARKQRMISGALT 1012

 Score = 83.2 bits (204), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 77/308 (25%), Positives = 135/308 (43%), Gaps = 68/308 (22%)

Query: 152 GGVLGDDMGLGKTIQTIAFLSAVIGK--------DNDHGDQL----VEGRKIAPI----- 194
           GG+L D MGLGKT+ TI+ L A   K         N  GD++    V+     P+     
Sbjct: 414 GGILADAMGLGKTVMTISLLLAHSWKAASTGFLCPNYEGDKVISSSVDDLTSPPVKATKF 473

Query: 195 -------------------LILCPTSVIRNWENEF---AEWARCSVAVYHGPNRDLVLQK 232
                              LI+CP +++  W+ E    A+    SV V++G +R    + 
Sbjct: 474 LGFDKRLLEQKSVLQNGGNLIVCPMTLLGQWKTEIEMHAKPGSLSVYVHYGQSRPKDAKL 533

Query: 233 VETQRLEIVITSFDTF--------RIHGKILCGISWDLVVVDEAHRLKNEKSKLYTACLE 284
           +     ++VIT++               + +  + W  +V+DEAH +KN KS++  A   
Sbjct: 534 LSQS--DVVITTYGVLTSEFSQENSADHEGIYAVRWFRIVLDEAHTIKNSKSQISLAAAA 591

Query: 285 ITTRKRFGLTGTIMQNKIMELFNLFDWIVPGCLGDREHFRVYYDEPLKHGQRFSAPERFV 344
           +   +R+ LTGT +QN + +L++L  ++     G    +     +P + G          
Sbjct: 592 LVADRRWCLTGTPIQNNLEDLYSLLRFLRIEPWGTWAWWNKLVQKPFEEG---------- 641

Query: 345 QVADKRKKHLV-SVLSKFLLRRTKEETIGH----LMLGKED-NIVFCRMSDVQKRVYRRM 398
              D+R   LV S+L   +LRRTK  T       L+L   D  +++C +S+ ++  Y  +
Sbjct: 642 ---DERGLKLVQSILKPIMLRRTKSSTDREGRPILVLPPADARVIYCELSESERDFYDAL 698

Query: 399 LQQPDVQI 406
            ++  V+ 
Sbjct: 699 FKRSKVKF 706
>AT1G50410.1 | chr1:18672828-18677365 FORWARD LENGTH=982
          Length = 981

 Score = 95.5 bits (236), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 49/126 (38%), Positives = 76/126 (60%)

Query: 538 KILLFSYSVRMLDILEKFLIRKGYCFSRFDGTTPMNARQLLIDEFNRCPSKQVFLISTRA 597
           K ++FS    MLD++E  LI     F R DGT  + AR   + EF+  P  +V ++S +A
Sbjct: 828 KTIIFSQWTGMLDLVELSLIENSIEFRRLDGTMSLIARDRAVKEFSNDPDVKVMIMSLKA 887

Query: 598 GNLGVNLVSANRVVIFDPSWNPAQDLQAQDRSFRFGQRRHVTVFRLLGAGSLEELIYSRQ 657
           GNLG+N+++A  V++ D  WNP  + QA DR+ R GQ R VTV R+    ++E+ I + Q
Sbjct: 888 GNLGLNMIAACHVILLDLWWNPTTEDQAIDRAHRIGQTRPVTVTRITIKNTVEDRILALQ 947

Query: 658 IYKQQL 663
             K+++
Sbjct: 948 EEKRKM 953
>AT1G11100.2 | chr1:3703934-3709302 REVERSE LENGTH=1270
          Length = 1269

 Score = 94.0 bits (232), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 47/130 (36%), Positives = 76/130 (58%)

Query: 534  LQGDKILLFSYSVRMLDILEKFLIRKGYCFSRFDGTTPMNARQLLIDEFNRCPSKQVFLI 593
            + G+K ++F+   +MLD+LE  L   G  + RFDG   + AR   + +FN  P   V ++
Sbjct: 1112 VAGEKAIVFTQWTKMLDLLEAGLKSSGIQYRRFDGKMTVPARDAAVQDFNTLPDVSVMIM 1171

Query: 594  STRAGNLGVNLVSANRVVIFDPSWNPAQDLQAQDRSFRFGQRRHVTVFRLLGAGSLEELI 653
            S +A +LG+N+V+A  V++ D  WNP  + QA DR+ R GQ R V V R     ++E+ I
Sbjct: 1172 SLKAASLGLNMVAACHVIMLDLWWNPTTEDQAIDRAHRIGQTRPVKVVRFTVKDTVEDRI 1231

Query: 654  YSRQIYKQQL 663
             + Q  K+++
Sbjct: 1232 LALQQKKRKM 1241

 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 71/149 (47%), Gaps = 37/149 (24%)

Query: 132 LLVHQRDGVRFLYNLYRNNH---GGVLGDDMGLGKTIQTIAFL--------------SAV 174
           LL HQR  + ++     + +   GG+L DD GLGKT+ TIA +              S  
Sbjct: 541 LLRHQRIALSWMSQKETSGNPCFGGILADDQGLGKTVSTIALILTERSTPYLPCEEDSKN 600

Query: 175 IG-KDNDHG------DQLVE-------GRKIAPILILCPTSVIRNWENEFAE----WARC 216
            G   +DH       +++VE       GR  A  LI+CPTS++R W +E  +     A  
Sbjct: 601 GGCNQSDHSQVVFNENKVVEDSLCKMRGRPAAGTLIVCPTSLMRQWADELRKKVTLEAHL 660

Query: 217 SVAVYHGPNRDLVLQKVETQRLEIVITSF 245
           SV VYHG +R       E  + ++VIT++
Sbjct: 661 SVLVYHGCSR--TKDPHELAKYDVVITTY 687

 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 57/116 (49%), Gaps = 16/116 (13%)

Query: 255 LCGISWDLVVVDEAHRLKNEKSKLYTACLEITTRKRFGLTGTIMQNKIMELFNLFDWIVP 314
           L  +SW  VV+DEA  +KN K++   AC  +  ++R+ L+GT +QN I +L++       
Sbjct: 752 LAQVSWFRVVLDEAQSIKNYKTQASIACSGLHAKRRWCLSGTPIQNSIADLYS------- 804

Query: 315 GCLGDREHFRVYYDEPLKHGQRF--SAPERFVQVADKRKKHLVSVLSKFLLRRTKE 368
                  +FR    +P    Q F  +          +  K L ++L K +LRRTK+
Sbjct: 805 -------YFRFLKYDPYSSYQTFCETIKNPISSYPGEGYKTLQAILKKVMLRRTKD 853
>AT1G61140.1 | chr1:22535038-22540610 REVERSE LENGTH=1281
          Length = 1280

 Score = 92.8 bits (229), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 47/130 (36%), Positives = 76/130 (58%)

Query: 534  LQGDKILLFSYSVRMLDILEKFLIRKGYCFSRFDGTTPMNARQLLIDEFNRCPSKQVFLI 593
            + G+K ++FS   +ML++LE  L+     + R DGT  + AR   + +FN  P   V ++
Sbjct: 1121 VAGEKAIVFSQWTKMLNLLEASLVSSHIQYRRLDGTMSVAARDKAVQDFNTLPEVTVMIM 1180

Query: 594  STRAGNLGVNLVSANRVVIFDPSWNPAQDLQAQDRSFRFGQRRHVTVFRLLGAGSLEELI 653
            S +A +LG+N+V+A  V++ D  WNP  + QA DR+ R GQ R VTV R     ++E+ I
Sbjct: 1181 SLKAASLGLNMVAACHVLMLDLWWNPTTEDQAIDRAHRIGQTRPVTVVRFTVKDTVEDRI 1240

Query: 654  YSRQIYKQQL 663
             + Q  K+ +
Sbjct: 1241 LALQQKKRMM 1250
>AT1G05490.1 | chr1:1618795-1623195 REVERSE LENGTH=1411
          Length = 1410

 Score = 92.0 bits (227), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 60/181 (33%), Positives = 95/181 (52%), Gaps = 11/181 (6%)

Query: 515  DAEHCGKMRALERLLSLWTLQGDKILLFSYSVRMLDILEKFLIRK-----GYCFSRFDGT 569
            D     K R L   + L  +  +K+L+FS  +  L ++ K L+ +     G       G 
Sbjct: 1194 DPNQSVKTRFLMEFVELCEVIKEKVLVFSQYIDPLKLIMKHLVSRFKWNPGEEVLYMHGK 1253

Query: 570  TPMNARQLLIDEFNRCPSK-QVFLISTRAGNLGVNLVSANRVVIFDPSWNPAQDLQAQDR 628
                 RQ LI+EFN   SK +VFL ST+A + G++LV A+RV++ D  WNPA + QA  R
Sbjct: 1254 LEQKQRQTLINEFNDPKSKAKVFLASTKACSEGISLVGASRVILLDVVWNPAVERQAISR 1313

Query: 629  SFRFGQRRHVTVFRLLGAGSLEELIYSRQIYKQQLSNIAVS-----GKIEKRYFEGVQDD 683
            ++R GQ+R V  + L+  G+ E   Y +Q  K ++S +  +      K +++  E V +D
Sbjct: 1314 AYRIGQKRIVYTYHLVAKGTPEGPKYCKQAQKDRISELVFACSSRHDKGKEKIAEAVTED 1373

Query: 684  K 684
            K
Sbjct: 1374 K 1374
>AT5G05130.1 | chr5:1512173-1514918 FORWARD LENGTH=863
          Length = 862

 Score = 89.4 bits (220), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 50/132 (37%), Positives = 72/132 (54%), Gaps = 2/132 (1%)

Query: 538 KILLFSYSVRMLDILEKFLIRKGYCFSRFDGTTPMNARQLLIDEFN--RCPSKQVFLIST 595
           K ++FS   +ML +LE  L   G+   R DG   +  R  +I EF         V L S 
Sbjct: 708 KSVVFSQFRKMLLLLETPLKAAGFTILRLDGAMTVKKRTQVIGEFGNPELTGPVVLLASL 767

Query: 596 RAGNLGVNLVSANRVVIFDPSWNPAQDLQAQDRSFRFGQRRHVTVFRLLGAGSLEELIYS 655
           +A   G+NL +A+RV +FDP WNPA + QA DR  R GQ++ V + R++   S+EE +  
Sbjct: 768 KASGTGINLTAASRVYLFDPWWNPAVEEQAMDRIHRIGQKQEVKMIRMIARNSIEERVLE 827

Query: 656 RQIYKQQLSNIA 667
            Q  K+ L+N A
Sbjct: 828 LQQKKKNLANEA 839

 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 78/330 (23%), Positives = 139/330 (42%), Gaps = 71/330 (21%)

Query: 135 HQRDGVRFLYNL--YRNN------HGGVLGDDMGLGKTIQTIAFLS------AVIGKDND 180
            ++DG  FL  L  YR++       GGV  DDMGLGKT+  ++ ++      A      +
Sbjct: 237 EEKDG-EFLNTLTNYRSDKRPDPLRGGVFADDMGLGKTLTLLSLIAFDRYGNASTSTPTE 295

Query: 181 H-----GDQL-------------------------VEGRKIA--PILILCPTSVIRNWEN 208
                 GD++                         V G  ++    LI+CP SVI  W  
Sbjct: 296 EPLDGEGDKIEKKGKKRGRGKSSESVTRKKLKTDDVVGMNVSQKTTLIVCPPSVISAWIT 355

Query: 209 EFAEWAR---CSVAVYHGPNRDLVLQKVETQRLEIVITSFDTFRIH----GKILCGISWD 261
           +  E        V +YHG  R   +   E  + +IV+T++ T  +        +  + W 
Sbjct: 356 QLEEHTVPGILKVYMYHGGERTDDVN--ELMKYDIVLTTYGTLAVEESWEDSPVKKMEWL 413

Query: 262 LVVVDEAHRLKNEKSKLYTACLEITTRKRFGLTGTIMQNKIMELFNLFDWIVPGCLGDRE 321
            +++DEAH +KN  ++      ++   +R+ +TGT +QN   +L++L  ++       + 
Sbjct: 414 RIILDEAHTIKNANAQQSRVVCKLKASRRWAVTGTPIQNGSFDLYSLMAFLRFEPFSIKS 473

Query: 322 HFRVYYDEPLKHGQRFSAPERFVQVADKRKKHLVSVLSKFLLRRTKEETIGHLMLGKEDN 381
           +++     PL  G +            K    L  +++   LRRTKE+++  L   K   
Sbjct: 474 YWQSLIQRPLGQGNK------------KGLSRLQVLMATISLRRTKEKSLIGLP-PKTVE 520

Query: 382 IVFCRMSDVQKRVYRRMLQQPD--VQILIN 409
             +  +S  ++++Y  M  +    VQ LIN
Sbjct: 521 TCYVELSPEERQLYDHMEGEAKGVVQNLIN 550
>AT1G05120.1 | chr1:1471624-1476067 REVERSE LENGTH=834
          Length = 833

 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/167 (33%), Positives = 85/167 (50%), Gaps = 2/167 (1%)

Query: 509 NFMGLSDAEHCGKMRAL-ERLLSLWTLQGD-KILLFSYSVRMLDILEKFLIRKGYCFSRF 566
           N + L D +   K+ AL E +  +    G  K ++FS     LD++   L + G    + 
Sbjct: 651 NRIKLDDFQTSTKIEALREEIRFMVERDGSAKAIVFSQFTSFLDLINYTLGKCGVSCVQL 710

Query: 567 DGTTPMNARQLLIDEFNRCPSKQVFLISTRAGNLGVNLVSANRVVIFDPSWNPAQDLQAQ 626
            G+  M AR   I++F   P  +VFL+S +AG + +NL  A+ V + DP WNPA + QAQ
Sbjct: 711 VGSMTMAARDTAINKFKEDPDCRVFLMSLKAGGVALNLTVASHVFMMDPWWNPAVERQAQ 770

Query: 627 DRSFRFGQRRHVTVFRLLGAGSLEELIYSRQIYKQQLSNIAVSGKIE 673
           DR  R GQ + + V R +   ++EE I   Q  K+ +    V G  E
Sbjct: 771 DRIHRIGQYKPIRVVRFIIENTVEERILRLQKKKELVFEGTVGGSQE 817

 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 61/126 (48%), Gaps = 10/126 (7%)

Query: 125 PSSINCRLLVHQRDGVRFLYNLYRNNHGGVLGDDMGLGKTIQTIAFLSAVIGKDNDHGDQ 184
           PS +   LL +Q++ + +     ++  GG+L D+MG+GKTIQ I+ + A         D+
Sbjct: 132 PSDLIMPLLRYQKEFLAWATKQEQSVAGGILADEMGMGKTIQAISLVLA-----RREVDR 186

Query: 185 LVEGRKIAPILILCPTSVIRNWENEFAEW---ARCSVAVYHGPNRDLVLQKVETQRLEIV 241
              G      L+LCP   +  W NE A +       V VYHG  R   ++  E    + V
Sbjct: 187 AQFGEAAGCTLVLCPLVAVSQWLNEIARFTSPGSTKVLVYHGAKRAKNIK--EFMNYDFV 244

Query: 242 ITSFDT 247
           +T++ T
Sbjct: 245 LTTYST 250
>AT1G48310.1 | chr1:17848620-17853731 REVERSE LENGTH=674
          Length = 673

 Score = 84.3 bits (207), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 76/132 (57%), Gaps = 2/132 (1%)

Query: 536 GDKILLFSYSVRMLDILEKFLIRKGYCFSRFDGTTPMNARQLLIDEFNRCPSKQVFLIST 595
           G K L+F++   ML+ L +FL +K     R DG+TP ++RQ L+ +F      +  ++S 
Sbjct: 484 GCKFLVFAHHQSMLEELHQFLKKKKVGCIRIDGSTPASSRQALVSDFQDKDEIKAAVLSI 543

Query: 596 RAGNLGVNLVSANRVVIFDPSWNPAQDLQAQDRSFRFGQRRHVTVFRLLGAGSLEELIYS 655
           RA  +G+ L +A+ V+  + SW P   +QA+DR+ R GQ   V +  LL   +++++I+ 
Sbjct: 544 RAAGVGITLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNIHYLLANDTVDDIIWD 603

Query: 656 RQIYKQQLSNIA 667
             + + +L N+ 
Sbjct: 604 --VVQSKLDNLG 613

 Score = 83.6 bits (205), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 103/216 (47%), Gaps = 50/216 (23%)

Query: 123 QVPSSINCRLLVHQRDGVRFLYNLYRNNHGG--VLGDDMGLGKTIQTIAFLSAVIGKDND 180
           ++PS I  +LL  QR+G+ F+       HGG  +L D+MGLGKT+Q IA  + V      
Sbjct: 163 KIPSHIEPKLLPFQREGIEFILQ-----HGGRVLLADEMGLGKTLQAIAVTTCV------ 211

Query: 181 HGDQLVEGRKIAPILILCPTSVIRNWENEFAEWARCSVAVYHGPNRDLVLQKVE------ 234
                   ++  P+LI+ P+S+  +W     +W        H P  D+V+   +      
Sbjct: 212 --------QESWPVLIIAPSSLRLHWATMIHQW-------LHVPPSDIVVVLPQPGGSNK 256

Query: 235 ------------TQRLEIV--ITSFDTFRIHGKILCGISWDLVVVDEAHRLKNEKSKLYT 280
                       T  L+ V  I S+D      K+L  + + +V+ DE+H LKN ++K  +
Sbjct: 257 CGFTIVSSNTKGTIHLDGVFNIVSYDVVTKLDKLLMALDFKVVIADESHFLKNGQAKRTS 316

Query: 281 ACLEITTRKRFG--LTGTIMQNKIMELFNLFDWIVP 314
           ACL +  + ++   L+GT   ++ +ELF   + + P
Sbjct: 317 ACLPVIKKAQYAILLSGTPALSRPIELFKQLEALYP 352
>AT3G24340.1 | chr3:8832085-8835722 REVERSE LENGTH=1133
          Length = 1132

 Score = 80.1 bits (196), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 50/144 (34%), Positives = 79/144 (54%), Gaps = 6/144 (4%)

Query: 537  DKILLFSYSVRMLDILEKFLI-----RKGYCFSRFDGTTPMNARQLLIDEFNRCPS-KQV 590
            +K+L++S  +  L ++ + LI      +G       G      RQ +ID FN+  S  +V
Sbjct: 944  EKVLVYSQYIDTLKLIMEQLIAECDWTEGEQILLMHGKVEQRDRQHMIDNFNKPDSGSKV 1003

Query: 591  FLISTRAGNLGVNLVSANRVVIFDPSWNPAQDLQAQDRSFRFGQRRHVTVFRLLGAGSLE 650
             L ST+A + G++LV A+RVVI D  WNP+ + QA  R+FR GQ+R V ++ L+   + E
Sbjct: 1004 LLASTKACSEGISLVGASRVVILDVVWNPSVESQAISRAFRIGQKRAVFIYHLMVKDTSE 1063

Query: 651  ELIYSRQIYKQQLSNIAVSGKIEK 674
               Y +Q  K ++S +  S   EK
Sbjct: 1064 WNKYCKQSEKHRISELVFSSTNEK 1087
>AT2G21450.1 | chr2:9179622-9182356 REVERSE LENGTH=817
          Length = 816

 Score = 74.3 bits (181), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 57/216 (26%), Positives = 99/216 (45%), Gaps = 45/216 (20%)

Query: 135 HQRDGVRFL-YNLYRNNHGG-VLGDDMGLGKTIQTIAFLSAVIGKDNDHGDQLVEGRKIA 192
           HQ +G RFL  NL  +  GG +L    G GKT   I+FL + +  D             A
Sbjct: 268 HQTEGFRFLCNNLAADEPGGCILAHAPGSGKTFLLISFLQSFMAMDPQ-----------A 316

Query: 193 PILILCPTSVIRNWENEFAEWARCSVAVYHGPNRDLVLQKVETQRLEIVITS-------- 244
             L++ P  +I +W+ EF  W      V   P  D    K E+++ ++ +          
Sbjct: 317 RPLVVLPKGIIESWKREFTLWE-----VEKIPLLDFYSVKAESRKQQLKVLGQWIKERSI 371

Query: 245 -FDTFRIHGKILCGISWD---------------LVVVDEAHRLKNEKSKLYTACLEITTR 288
            F  ++   +I+C  +++               L+++DE H  +N+++ + ++   + TR
Sbjct: 372 LFLGYQQFTRIICDDNFEAASEDCKLILLEKPTLLILDEGHTSRNKETYMLSSLARVKTR 431

Query: 289 KRFGLTGTIMQNKIMELFNLFDWIVPGCL---GDRE 321
           ++  LTGT+ QN + E+FN+ D + P  L   G RE
Sbjct: 432 RKVVLTGTLFQNNVEEVFNILDLVRPKFLKRPGTRE 467

 Score = 73.6 bits (179), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 79/151 (52%), Gaps = 5/151 (3%)

Query: 521 KMRALERLLSLWTLQGDKILLFSYSVRMLDILEKFLIR-KGYCFSR----FDGTTPMNAR 575
           KM+    LL+L    G+K+L+FS  +  +  LE+ +   KG+   +      G +    R
Sbjct: 621 KMKFFLNLLALCESTGEKLLVFSQYIVPIKTLERLMSSMKGWRLGKEMFTITGDSSNEQR 680

Query: 576 QLLIDEFNRCPSKQVFLISTRAGNLGVNLVSANRVVIFDPSWNPAQDLQAQDRSFRFGQR 635
           +  ++ FN     +VF  S +A   G++LV A+RV+I D   NP+   QA  R++R GQ+
Sbjct: 681 EWSMERFNNSLEAKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTQQAVARAYRPGQK 740

Query: 636 RHVTVFRLLGAGSLEELIYSRQIYKQQLSNI 666
           R V  ++L+ A S EE  Y     K+ +S +
Sbjct: 741 RKVYAYKLVAADSPEEENYETCTRKEMMSKM 771
>AT2G16390.1 | chr2:7097638-7101182 FORWARD LENGTH=889
          Length = 888

 Score = 73.6 bits (179), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 44/136 (32%), Positives = 72/136 (52%), Gaps = 5/136 (3%)

Query: 521 KMRALERLLSLWTLQGDKILLFSYSVRMLDILEKFL-IRKGYCFSR----FDGTTPMNAR 575
           K +    L++L    G+K+L+FS  +  L  LE+   + KG+   +      G T    R
Sbjct: 695 KAKFFLNLINLCDSAGEKLLVFSQYLIPLKFLERLAALAKGWKLGKEVFVLTGNTSSEQR 754

Query: 576 QLLIDEFNRCPSKQVFLISTRAGNLGVNLVSANRVVIFDPSWNPAQDLQAQDRSFRFGQR 635
           +  ++ FN  P  ++F  S +A   G++LV A+R++I D   NP+   QA  R+FR GQ+
Sbjct: 755 EWSMETFNSSPDAKIFFGSIKACGEGISLVGASRILILDVPLNPSVTRQAIGRAFRPGQK 814

Query: 636 RHVTVFRLLGAGSLEE 651
           + V  +RL+   S EE
Sbjct: 815 KMVHAYRLIAGSSPEE 830

 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/207 (24%), Positives = 90/207 (43%), Gaps = 40/207 (19%)

Query: 135 HQRDGVRFL-YNLYRNNHGG-VLGDDMGLGKTIQTIAFLSAVIGKDNDHGDQLVEGRKIA 192
           HQ +G +FL  NL  ++ GG ++    G GKT   I+F+ + + K              A
Sbjct: 353 HQIEGFQFLCSNLVADDPGGCIMAHAPGSGKTFMIISFMQSFLAK-----------YPQA 401

Query: 193 PILILCPTSVIRNWENEFAEWARCSVAVYHGPNRDLVLQKVETQRLEIVITS-------- 244
             L++ P  ++  W+ EF  W      V   P  D    K E +  ++ I          
Sbjct: 402 KPLVVLPKGILPTWKKEFVRWQ-----VEDIPLLDFYSAKAENRAQQLSILKQWMEKKSI 456

Query: 245 -FDTFRIHGKILCGISWD-------------LVVVDEAHRLKNEKSKLYTACLEITTRKR 290
            F  ++    I+C  + D             ++++DE H  +NE + L  +  ++ T ++
Sbjct: 457 LFLGYQQFSTIVCDDTTDSLSCQEILLKVPSILILDEGHTPRNEDTNLLQSLAQVQTPRK 516

Query: 291 FGLTGTIMQNKIMELFNLFDWIVPGCL 317
             L+GT+ QN + E+FN+ + + P  L
Sbjct: 517 VVLSGTLYQNHVKEVFNILNLVRPKFL 543
>AT5G20420.1 | chr5:6899015-6903266 REVERSE LENGTH=1262
          Length = 1261

 Score = 72.4 bits (176), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 49/140 (35%), Positives = 79/140 (56%), Gaps = 8/140 (5%)

Query: 537  DKILLFSYSV---RMLDILEKFLIR--KGYCFSRFDGTTPMNARQLLIDEFNRC--PSKQ 589
            +KIL+F +++   RM   L + + R  +G       G   +  R  +ID+F     PS+ 
Sbjct: 1079 EKILIFCHNIAPIRMFTELFENIFRWQRGREILTLTGDLELFERGRVIDKFEEPGNPSR- 1137

Query: 590  VFLISTRAGNLGVNLVSANRVVIFDPSWNPAQDLQAQDRSFRFGQRRHVTVFRLLGAGSL 649
            V L S  A   G++L +A+RV++ D  WNP++  QA  R+FR GQ++ V V++LL  G+L
Sbjct: 1138 VLLASITACAEGISLTAASRVIMLDSEWNPSKTKQAIARAFRPGQQKVVYVYQLLSRGTL 1197

Query: 650  EELIYSRQIYKQQLSNIAVS 669
            EE  Y R  +K+ +S +  S
Sbjct: 1198 EEDKYRRTTWKEWVSCMIFS 1217

 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 63/230 (27%), Positives = 97/230 (42%), Gaps = 64/230 (27%)

Query: 131 RLLVHQRDGVRFLY------------NLYRNNHGG-VLGDDMGLGKTIQTIAFLSAVIGK 177
           +L VHQR    FL+            +    N GG V+    G GKT   IAFL++ +  
Sbjct: 678 KLHVHQRRAFEFLWRNVAGSVEPSLMDPTSGNIGGCVISHSPGAGKTFLIIAFLTSYL-- 735

Query: 178 DNDHGDQLVEGRKIAPILILCPTSVIRNWENEFAEWA-RCSVAVYHG------------- 223
                 +L  G++    L+L P + +  W  EF +W     V + HG             
Sbjct: 736 ------KLFPGKRP---LVLAPKTTLYTWYKEFIKWEIPVPVHLIHGRRTYCTFKQNKTV 786

Query: 224 -------PNRDLV-----LQKVETQR-----LEIVITSFDTFR------IHGKILCGI-- 258
                  P+RD++     L+K++        L +  TSF T         H K +  +  
Sbjct: 787 QFNGVPKPSRDVMHVLDCLEKIQKWHAHPSVLVMGYTSFTTLMREDSKFAHRKYMAKVLR 846

Query: 259 -SWDLVVVDEAHRLKNEKSKLYTACLEITTRKRFGLTGTIMQNKIMELFN 307
            S  L+V+DE H  ++ KS+L  A +++ T  R  L+GT+ QN   E FN
Sbjct: 847 ESPGLLVLDEGHNPRSTKSRLRKALMKVGTDLRILLSGTLFQNNFCEYFN 896
>AT5G07810.1 | chr5:2491412-2498484 REVERSE LENGTH=1191
          Length = 1190

 Score = 72.4 bits (176), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 106/216 (49%), Gaps = 20/216 (9%)

Query: 538 KILLFSYSVRMLDILEKFLIRKGYCFSRFDGTTPMNARQLLIDEFNRCPSKQVFLISTRA 597
           K+++F++  ++LD +++F+  KG  F R DGTT    RQL +  F      ++ +I   A
Sbjct: 556 KMVVFAHHHKVLDGIQEFICDKGIGFVRIDGTTLPRDRQLAVQSFQFSSEVKIAIIGVEA 615

Query: 598 GNLGVNLVSANRVVIFDPSWNPAQDLQAQDRSFRFGQRRHVTVFRLLGAGSLEELIYSRQ 657
           G +G++  +A  VV  +    P+  LQA+DR+ R GQ   V V+      +++E  +  Q
Sbjct: 616 GGVGLDFSAAQNVVFLELPKTPSLLLQAEDRAHRRGQTSAVNVYIFCAKDTMDESNW--Q 673

Query: 658 IYKQQLSNIAVSGKIEKRYFEGVQDDKKFQGELFGICNLFRDLSDKLFTSEIIEMHGEHG 717
              ++L  I  S   + +Y      D K + E+ G  ++F+   +   +SE   + G+  
Sbjct: 674 NLNKKLHRI--SSTTDGKY------DGKTEIEIGG-ASIFKPAEE---SSEREVLEGQPS 721

Query: 718 KGNTAETIGIREIVD-----TNIFGTQDQMKSSMTA 748
           + NT     I E  D     T++  T D +K  MT+
Sbjct: 722 ESNTVVADKIVESCDDPGTETDVSNTID-LKDDMTS 756

 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/227 (25%), Positives = 97/227 (42%), Gaps = 39/227 (17%)

Query: 118 ERPVVQVPSSINCRLLVHQRDGVRFLYNLYRNNHGG--VLGDDMGLGKTIQTIAFLSAVI 175
           E+ +  +P  +   LL  Q DG+RF   L R   GG   + D+MGLGKT+Q IA     I
Sbjct: 190 EQLIETLPRKLVNALLPFQLDGLRF--GLRR---GGRCFIADEMGLGKTLQAIAIAGCFI 244

Query: 176 GKDNDHGDQLVEGRKIAPILILCPTSVIRNWENEFAEW-ARCSVAVYHGPNRDLVLQKVE 234
            + +              IL++CP  +   W  E   W   C  +  H     LV    +
Sbjct: 245 SEGS--------------ILVVCPAVLRFTWAEELERWLPSCLPSDVH-----LVFGHQD 285

Query: 235 TQRL-----EIVITSFDTFRIHGKILCGISWDLVVVDEAHRLKNEKSKL----YTACLEI 285
                    ++V+ S+   +     +    W L++VDE+H L+  K K         L++
Sbjct: 286 NPAYLPRWPKVVVISYKMLQHLRTTMLEREWALLIVDESHHLRCSKKKSDPPEIKTVLDV 345

Query: 286 TTRKR--FGLTGTIMQNKIMELFNLFDWIVPGCLG-DREHFRVYYDE 329
             + +    L+GT   ++  ++F+  + + PG LG D+  F   Y E
Sbjct: 346 AEKVKHIILLSGTPSVSRPFDIFHQINMLWPGLLGKDKYEFAKTYCE 392
>AT2G40770.1 | chr2:17013535-17021315 REVERSE LENGTH=1665
          Length = 1664

 Score = 60.1 bits (144), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 50/154 (32%), Positives = 71/154 (46%), Gaps = 27/154 (17%)

Query: 521  KMRALERLLSLWTLQGD---KILLFSYSVRMLDILE-KFLIRKGYCF------------S 564
            K+ A+ R + LW    D   K+L+FS    +LD+LE  F      C             S
Sbjct: 1432 KIEAVTRRI-LWIKSSDPQTKVLVFSSWNDVLDVLEHAFAANSITCIRMKGGRKSQTAIS 1490

Query: 565  RFDG----TTPMNARQLLIDEFNRCPSKQVFLISTRAGNLGVNLVSANRVVIFDPSWNPA 620
            +F G    T   N+ Q          S QV L+  + G  G+NL+ A  V++ +P  NPA
Sbjct: 1491 KFKGSEKETQKTNSHQ------KEEKSIQVLLLLVQHGANGLNLLEAQHVILVEPLLNPA 1544

Query: 621  QDLQAQDRSFRFGQRRHVTVFRLLGAGSLEELIY 654
             + QA  R  R GQ +   V R L +G++EE IY
Sbjct: 1545 AEAQAVGRVHRIGQEKPTLVHRFLVSGTVEESIY 1578
  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.322    0.138    0.414 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 17,635,109
Number of extensions: 776481
Number of successful extensions: 2058
Number of sequences better than 1.0e-05: 40
Number of HSP's gapped: 1960
Number of HSP's successfully gapped: 76
Length of query: 856
Length of database: 11,106,569
Length adjustment: 107
Effective length of query: 749
Effective length of database: 8,173,057
Effective search space: 6121619693
Effective search space used: 6121619693
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 116 (49.3 bits)