BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os05g0241000 Os05g0241000|AK068369
         (669 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G11390.1  | chr5:3633971-3636418 FORWARD LENGTH=704            313   2e-85
AT1G68910.1  | chr1:25908234-25910485 REVERSE LENGTH=628          264   1e-70

>AT5G11390.1 | chr5:3633971-3636418 FORWARD LENGTH=704
          Length = 703

 Score =  313 bits (802), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 244/685 (35%), Positives = 385/685 (56%), Gaps = 68/685 (9%)

Query: 19  GDGMNVEGGSM-EIITRVELELAFASEKLLNLEMLVMEIARKATDFEPPTL---EDESVS 74
           G  MN +  S  E++T+VEL+ AF SEKL+NL +L M++  +  DFE       EDE   
Sbjct: 38  GQVMNPQLSSAGEVLTKVELDFAFVSEKLVNLSLLTMQLGTRENDFESFVSKKEEDEEEP 97

Query: 75  S-------ETAESAFELDILYGFLDAEVGELDDMISTLETDIQNVEHMVCQDESGGK--- 124
           S       ++AE A E D+L   L++EV EL+ ++  L+ +IQ+   M+   +  G+   
Sbjct: 98  SSNVDDDDDSAEKALEFDLLSSILNSEVKELESLLGFLQNEIQSARVMISPFQHDGEAFL 157

Query: 125 -IKARLDAAMVSLKQMKELVSDIRKESAKFEKAIEFPHDKEG--------ITGDAGYENG 175
            ++ +L+    SL Q+ E V +++K+S+ F++ +    D++G        ++ + G E G
Sbjct: 158 DLEGKLNDTEQSLGQLMEQVVEMKKQSSNFQR-LSSGLDEQGSWSGGQTSVSQNDG-EFG 215

Query: 176 IVSSHTSMRTEDQRRNVLQMLEQSIASELDLEKKLSESRCIIEELKLKLHHHDQEKYFLE 235
            +S+  +M+T DQ+RNVL+MLE+S+A E++LEKKLSESR    EL++KL+  +Q+  ++E
Sbjct: 216 DLSAKINMQTADQQRNVLRMLEKSLAKEMELEKKLSESRNTERELEMKLYSSEQDVVYME 275

Query: 236 ESIESLCGKTFAAENASEVLLGTSKELVDKVSTVECHLSASRCREGDLESKLGES----- 290
           E  E    +   A+NA+EV  GTSKE+  K+  ++ +LS S  RE +L+SKL +S     
Sbjct: 276 EVTEDAFSRWLEADNAAEVFKGTSKEMSGKLQILQFNLSGSFKREDNLKSKLVDSKERLE 335

Query: 291 -----LMGLSS--------LQVNAENIQEGSQHSGGTETHPSPELPSLQDKVKELEKQLR 337
                L  L S        L    E ++E  Q +       + E  +L +KV  LE+QL 
Sbjct: 336 AKECALHKLDSSNARLADFLVAQTEGLKESLQEAEEKLILLNTENSTLSEKVSSLEEQLN 395

Query: 338 ESDSQLQLAKASAETFQEEQNVLHAEISTLENIIKSLKEDVSRAESRAQNAELRCMQLTE 397
           E   Q + A A++           A I+ LE I + LK+ +++ E+RA+  E +C  L E
Sbjct: 396 EYGIQTEDADATS----------GALITDLERINEELKDKLAKTEARAEETESKCKILEE 445

Query: 398 ANIELNGELNSLKSHGS--EKTSLLERKLKESHTQLEHAKASLDATVEQQSMLRSTMSDM 455
           +  EL  EL + +  G    K + LE+ L++S  QLEHA A+++A+ E+Q++L ST+SDM
Sbjct: 446 SKKELQDELGNFRDKGFTIHKLASLEKHLRDSDLQLEHAVAAVEASKEKQNLLYSTVSDM 505

Query: 456 EHMIDDLKGKVLKAETRAENAESKCTLLTDTNLELSEELSFLRGRAESLENSLHEANHVK 515
           E +I+DLK KVLKAE RA+  E K  +++++N E++EEL F +GR +  E  L +A   K
Sbjct: 506 EDVIEDLKSKVLKAENRADITEEKLIMVSESNAEVNEELKFFKGRLKEGEKYLQQAEERK 565

Query: 516 MSTVKDIGIRTKIITDLVTKLALERERLHQQISLLTKKNKILAQKCKGSVKDDTQLSKNV 575
           + T KDIG+  KI+  LV +LA ERERLH+QI+ L+++N +L  K K   K     S N 
Sbjct: 566 LRTAKDIGVHNKIMKKLVMQLAAERERLHKQITNLSRENCVLMVKLKKVGKTGYMESGN- 624

Query: 576 TGKDVELHSTKLAEEIVPDFSSSQTKAEKPVDPSNEEEKTRSSEDDDSGGEGTAEAVRTI 635
            G +V   S + A         S+ +A      + EEE+T S  D  S        VR +
Sbjct: 625 -GSEVSPKSDQNASSC---HQGSRLQATFISLTNPEEEETGSKSDIGS--------VRRL 672

Query: 636 QPSVLNWKYITVAFLILLVAVFIYL 660
               L +K+I VA L++L++   Y+
Sbjct: 673 DVGALRFKHILVAILVILISSIAYV 697



>AT1G68910.1 | chr1:25908234-25910485 REVERSE LENGTH=628
          Length = 627

 Score =  264 bits (674), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 215/647 (33%), Positives = 366/647 (56%), Gaps = 64/647 (9%)

Query: 29  MEIITRVELELAFASEKLLNLEMLVMEIARKATDFEPPTLEDESVSSETAESAFELDILY 88
           + ++T++E++ A+ SEKL+NL +L+M +     D E     D S +S   E A   D+L 
Sbjct: 24  LRMLTKLEIDSAYTSEKLMNLHVLLMHLLAWDNDLEGMGTLDSSPAS--FEKALTFDLLC 81

Query: 89  GFLDAEVGELDDMISTLETDIQNVEHMV--CQDESGGKIKARLDAAMVSLKQMKELVSDI 146
           G L++EV E+D+++  LE  I +  + +  C+  +   I+ +L  +  SLKQ +  VS+I
Sbjct: 82  GILESEVKEVDEVLDVLEAQIVDTSYKISSCKHGNYIVIEGKLGESAESLKQSRGQVSEI 141

Query: 147 RKESAKFEKAIEFPHDKEGITGDAGYENGI-VSSHTSMRTEDQR-RNVLQMLEQSIASEL 204
             + A+  + + +  +     G +  E  + +    +++  D R +N L+MLE+S++ EL
Sbjct: 142 TLQLAQLRRTLHYIRN-----GTSENEESVELRQKYALKPSDLRHKNALRMLEKSLSREL 196

Query: 205 DLEKKLSESRCIIEELKLKLHHHDQEKYFLEESIESLCGKTFAAENASEVLLGTSKELVD 264
           +LEKKL E +   E+LKLKLH+ ++    +EE+ E + G+   A+N+SEVL G SKELV 
Sbjct: 197 ELEKKLMEFQQNEEQLKLKLHYTEEVSSRMEEASEFIWGRFLEADNSSEVLTGISKELVG 256

Query: 265 KVSTVECHLSASRCREGDLESKLGESLMGLSSLQVNAENIQEGSQHSGGTETHPS---PE 321
           ++  ++  L+ S  RE +L+SKL +      ++Q+ A+++    Q   GT +  S    E
Sbjct: 257 RLQILQFSLNGSAQRESELKSKLEDC-----TVQLEAKDLL--VQKLEGTISENSEIVSE 309

Query: 322 LPSLQDKVKELEKQLRESDSQLQLAKASAETFQEEQNVLHAEISTLENIIKSLKEDVSRA 381
           + +L++ VK  E++L+ +D +L+   AS      +Q +L   ++ +EN  +S+KE++  A
Sbjct: 310 VLTLREYVKSAEQKLKNTDLELKSVNAS------KQEIL-VHLAEMENANESVKENLFEA 362

Query: 382 ESRAQNAELRCMQLTEANIELNGELNSLKSHGSEKTSL---LERKLKESHTQLEHAKASL 438
           ESRA++ E +  +L  AN+EL  ELN LK    +KT     LE++++E   Q++++K S 
Sbjct: 363 ESRAESGEAKIKELDAANLELTEELNFLKDADDKKTKKVNSLEKQVRELEVQVQNSKVSS 422

Query: 439 DATVEQQSMLRSTMSDMEHMIDDLKGKVLKAETRAENAESKCTLLTDTNLELSEELSFLR 498
           +A  EQQ+ML S + DME +I+DLK K  KAE+R E  E +C +L+ TN EL++++SFLR
Sbjct: 423 EANQEQQNMLYSAIWDMETLIEDLKSKASKAESRTETVEEQCIVLSTTNSELNKDVSFLR 482

Query: 499 GRAESLENSLHEANHVKMSTVKDIGIRTKIITDLVTKLALERERLHQQISLLTKKNKIL- 557
            +A+SLE  L  AN+ K    ++I  R K++ D++ +L+ ERER+ +Q+  L K+NKIL 
Sbjct: 483 QKAKSLEAMLDLANNEKERYAQEITTRNKVLMDMMLQLSSERERIQEQLYSLAKENKILR 542

Query: 558 AQKC------KGSVKDDTQLSKNVTGKDVELHSTKLAEEIVPDFSSSQTKAEKPVDPSNE 611
             +C       GS   D +LS +  G ++E     LAE +                   E
Sbjct: 543 VNQCSNTYQRNGSYAGDKELSFHADGHEIE----ALAESL------------------QE 580

Query: 612 EEKTRSSEDDDSGGEGTAEAVRTIQPSVLNWKYITVAFLILLVAVFI 658
           +E+TR   +  S  E ++E  R I+   +    + VA + +L   F 
Sbjct: 581 DERTREEPEKQSVSEKSSEIRRAIKLKHI----LVVALVFVLFCSFF 623



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.308    0.125    0.328 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 13,188,951
Number of extensions: 533966
Number of successful extensions: 3500
Number of sequences better than 1.0e-05: 48
Number of HSP's gapped: 3411
Number of HSP's successfully gapped: 68
Length of query: 669
Length of database: 11,106,569
Length adjustment: 105
Effective length of query: 564
Effective length of database: 8,227,889
Effective search space: 4640529396
Effective search space used: 4640529396
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 115 (48.9 bits)